RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 CCDC25Q86WR0 208 aa4.82□□□□□ -1.64
SNORA40.2-201ENST00000390847 TMEM217Q8N7C4 229 aa4.82□□□□□ -1.64
SNORA40.2-201ENST00000390847 KAT2AQ92830 837 aa4.82□□□□□ -1.64
SNORA40.2-201ENST00000390847 MASTLQ96GX5 879 aa4.82□□□□□ -1.64
SNORA40.2-201ENST00000390847 ZNF419Q96HQ0 510 aaPredicted RBP4.82□□□□□ -1.64
SNORA40.2-201ENST00000390847 CADM1Q9BY67 442 aaKnown RBP4.82□□□□□ -1.64
SNORA40.2-201ENST00000390847 KRTAP4-2Q9BYR5 136 aa4.82□□□□□ -1.64
SNORA40.2-201ENST00000390847 TMEM248Q9NWD8 314 aa4.82□□□□□ -1.64
SNORA40.2-201ENST00000390847 TRNAU1APQ9NX07 287 aaKnown RBP4.82□□□□□ -1.64
SNORA40.2-201ENST00000390847 LAMP3Q9UQV4 416 aa4.82□□□□□ -1.64
SNORA40.2-201ENST00000390847 ZNF804BA4D1E1 1349 aa4.81□□□□□ -1.64
SNORA40.2-201ENST00000390847 ZNF335Q9H4Z2 1342 aaPredicted RBP4.81□□□□□ -1.64
SNORA40.2-201ENST00000390847 WDR91A4D1P6 747 aa4.81□□□□□ -1.64
SNORA40.2-201ENST00000390847 PRPF4O43172 522 aaKnown RBP eCLIP4.81□□□□□ -1.64
SNORA40.2-201ENST00000390847 STRNO43815 780 aa4.81□□□□□ -1.64
SNORA40.2-201ENST00000390847 HLA-DQA2P01906 255 aa4.81□□□□□ -1.64
SNORA40.2-201ENST00000390847 PRKCHP24723 683 aa4.81□□□□□ -1.64
SNORA40.2-201ENST00000390847 KLRC2P26717 231 aa4.81□□□□□ -1.64
SNORA40.2-201ENST00000390847 CCR5P51681 352 aa4.81□□□□□ -1.64
SNORA40.2-201ENST00000390847 RHAGQ02094 409 aa4.81□□□□□ -1.64
SNORA40.2-201ENST00000390847 CHRNDQ07001 517 aa4.81□□□□□ -1.64
SNORA40.2-201ENST00000390847 PMPCAQ10713 525 aa4.81□□□□□ -1.64
SNORA40.2-201ENST00000390847 TRPC3Q13507 836 aa4.81□□□□□ -1.64
SNORA40.2-201ENST00000390847 BYSLQ13895 437 aaKnown RBP4.81□□□□□ -1.64
SNORA40.2-201ENST00000390847 TRIP6Q15654 476 aaKnown RBP4.81□□□□□ -1.64
SNORA40.2-201ENST00000390847 CCDC142Q17RM4 750 aa4.81□□□□□ -1.64
SNORA40.2-201ENST00000390847 AP5B1Q2VPB7 878 aa4.81□□□□□ -1.64
SNORA40.2-201ENST00000390847 MIDNQ504T8 468 aa4.81□□□□□ -1.64
SNORA40.2-201ENST00000390847 ISM2Q6H9L7 571 aa4.81□□□□□ -1.64
SNORA40.2-201ENST00000390847 SHC4Q6S5L8 630 aa4.81□□□□□ -1.64
SNORA40.2-201ENST00000390847 DDIASQ8IXT1 998 aa4.81□□□□□ -1.64
SNORA40.2-201ENST00000390847 NCSTNQ92542 709 aa4.81□□□□□ -1.64
SNORA40.2-201ENST00000390847 RNFT2Q96EX2 444 aa4.81□□□□□ -1.64
SNORA40.2-201ENST00000390847 EIF2AK1Q9BQI3 630 aaKnown RBP4.81□□□□□ -1.64
SNORA40.2-201ENST00000390847 IFT27Q9BW83 186 aa4.81□□□□□ -1.64
SNORA40.2-201ENST00000390847 Q9N2J8 555 aa4.81□□□□□ -1.64
SNORA40.2-201ENST00000390847 GGA3Q9NZ52 723 aa4.81□□□□□ -1.64
SNORA40.2-201ENST00000390847 C9orf78Q9NZ63 289 aaPredicted RBP4.81□□□□□ -1.64
SNORA40.2-201ENST00000390847 UPB1Q9UBR1 384 aa4.81□□□□□ -1.64
SNORA40.2-201ENST00000390847 DHDHQ9UQ10 334 aa4.81□□□□□ -1.64
SNORA40.2-201ENST00000390847 DHX16O60231 1041 aaKnown RBP4.8□□□□□ -1.64
SNORA40.2-201ENST00000390847 HBP1O60381 514 aa4.8□□□□□ -1.64
SNORA40.2-201ENST00000390847 CBX6O95503 412 aa4.8□□□□□ -1.64
SNORA40.2-201ENST00000390847 AGR2O95994 175 aa4.8□□□□□ -1.64
SNORA40.2-201ENST00000390847 FCGR2AP12318 317 aa4.8□□□□□ -1.64
SNORA40.2-201ENST00000390847 XBP1P17861 261 aa4.8□□□□□ -1.64
SNORA40.2-201ENST00000390847 SKIV2L2P42285 1042 aaKnown RBP4.8□□□□□ -1.64
SNORA40.2-201ENST00000390847 TLE2Q04725 743 aa4.8□□□□□ -1.64
SNORA40.2-201ENST00000390847 IL13RA2Q14627 380 aa4.8□□□□□ -1.64
SNORA40.2-201ENST00000390847 C5orf22Q49AR2 442 aa4.8□□□□□ -1.64
SNORA40.2-201ENST00000390847 ALG10Q5BKT4 473 aa4.8□□□□□ -1.64
SNORA40.2-201ENST00000390847 ALG10BQ5I7T1 473 aa4.8□□□□□ -1.64
SNORA40.2-201ENST00000390847 SH2D4BQ5SQS7 431 aa4.8□□□□□ -1.64
SNORA40.2-201ENST00000390847 IGFN1Q86VF2 1251 aa4.8□□□□□ -1.64
SNORA40.2-201ENST00000390847 NANOGP1Q8N7R0 232 aa4.8□□□□□ -1.64
SNORA40.2-201ENST00000390847 DENND1AQ8TEH3 1009 aa4.8□□□□□ -1.64
SNORA40.2-201ENST00000390847 TBATAQ96M53 351 aa4.8□□□□□ -1.64
SNORA40.2-201ENST00000390847 GPR63Q9BZJ6 419 aa4.8□□□□□ -1.64
SNORA40.2-201ENST00000390847 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.8□□□□□ -1.64
SNORA40.2-201ENST00000390847 MROH8Q9H579 483 aa4.8□□□□□ -1.64
SNORA40.2-201ENST00000390847 ZNF304Q9HCX3 659 aa4.8□□□□□ -1.64
SNORA40.2-201ENST00000390847 ALKBH4Q9NXW9 302 aa4.8□□□□□ -1.64
SNORA40.2-201ENST00000390847 IFT80Q9P2H3 777 aaPredicted RBP4.8□□□□□ -1.64
SNORA40.2-201ENST00000390847 CD207Q9UJ71 328 aa4.8□□□□□ -1.64
SNORA40.2-201ENST00000390847 AGO2Q9UKV8 859 aaKnown RBP4.8□□□□□ -1.64
SNORA40.2-201ENST00000390847 CRYL1Q9Y2S2 319 aa4.8□□□□□ -1.64
SNORA40.2-201ENST00000390847 AFG3L2Q9Y4W6 797 aa4.8□□□□□ -1.64
SNORA40.2-201ENST00000390847 KIR2DS5A0A0G2JLQ3 304 aa4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 TMEM247A6NEH6 219 aa4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 KIR2DS3K7RE56 304 aa4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 TLR2O60603 784 aa4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 WNT1P04628 370 aa4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 IFIT1P09914 478 aaKnown RBP4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 PGM1P36871 562 aa4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 GAD2Q05329 585 aa4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 TBL3Q12788 808 aaKnown RBP4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 KLF9Q13886 244 aaPredicted RBP4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 RABEP1Q15276 862 aa4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 COLEC12Q5KU26 742 aa4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 WDR45BQ5MNZ6 344 aa4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 TTC39AQ5SRH9 613 aa4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 PXDC1Q5TGL8 231 aa4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 TTLL5Q6EMB2 1281 aa4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 HMBOX1Q6NT76 420 aa4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 DEF8Q6ZN54 512 aa4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 MMS22LQ6ZRQ5 1243 aa4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 BBS12Q6ZW61 710 aa4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 ZNF575Q86XF7 245 aa4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 ESX1Q8N693 406 aa4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 PAF1Q8N7H5 531 aa4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 SCAIQ8N9R8 606 aa4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 SLC44A5Q8NCS7 719 aa4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 RPL36ALQ969Q0 106 aaKnown RBP4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 EME1Q96AY2 570 aa4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 CLMNQ96JQ2 1002 aa4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 CD180Q99467 661 aa4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 NPLQ9BXD5 320 aaPredicted RBP4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 FRMD8Q9BZ67 464 aaPredicted RBP4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 SLC29A3Q9BZD2 475 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms