RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 RASAL3Q86YV0 1011 aa3.19□□□□□ -1.9
TRAJ40-201ENST00000390497 KLBQ86Z14 1044 aa3.19□□□□□ -1.9
TRAJ40-201ENST00000390497 RUFY2Q8WXA3 655 aa3.19□□□□□ -1.9
TRAJ40-201ENST00000390497 RAB40AQ8WXH6 277 aa3.19□□□□□ -1.9
TRAJ40-201ENST00000390497 KAT2BQ92831 832 aa3.19□□□□□ -1.9
TRAJ40-201ENST00000390497 KIF1BPQ96EK5 621 aa3.19□□□□□ -1.9
TRAJ40-201ENST00000390497 BARD1Q99728 777 aaKnown RBP3.19□□□□□ -1.9
TRAJ40-201ENST00000390497 SDF4Q9BRK5 362 aa3.19□□□□□ -1.9
TRAJ40-201ENST00000390497 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.19□□□□□ -1.9
TRAJ40-201ENST00000390497 ZNF341Q9BYN7 854 aa3.19□□□□□ -1.9
TRAJ40-201ENST00000390497 CTDSP1Q9GZU7 261 aa3.19□□□□□ -1.9
TRAJ40-201ENST00000390497 LMAN2LQ9H0V9 348 aa3.19□□□□□ -1.9
TRAJ40-201ENST00000390497 RANBP17Q9H2T7 1088 aaKnown RBP3.19□□□□□ -1.9
TRAJ40-201ENST00000390497 MROH8Q9H579 483 aa3.19□□□□□ -1.9
TRAJ40-201ENST00000390497 SYNCQ9H7C4 482 aa3.19□□□□□ -1.9
TRAJ40-201ENST00000390497 PRKRIP1Q9H875 184 aaPredicted RBP3.19□□□□□ -1.9
TRAJ40-201ENST00000390497 TXNRD2Q9NNW7 524 aa3.19□□□□□ -1.9
TRAJ40-201ENST00000390497 CLIC5Q9NZA1 410 aa3.19□□□□□ -1.9
TRAJ40-201ENST00000390497 IL1RAPL1Q9NZN1 696 aa3.19□□□□□ -1.9
TRAJ40-201ENST00000390497 FBXO40Q9UH90 709 aa3.19□□□□□ -1.9
TRAJ40-201ENST00000390497 NRBP1Q9UHY1 535 aa3.19□□□□□ -1.9
TRAJ40-201ENST00000390497 GPR34Q9UPC5 381 aa3.19□□□□□ -1.9
TRAJ40-201ENST00000390497 DHDHQ9UQ10 334 aa3.19□□□□□ -1.9
TRAJ40-201ENST00000390497 PKP3Q9Y446 797 aa3.19□□□□□ -1.9
TRAJ40-201ENST00000390497 PSAT1Q9Y617 370 aa3.19□□□□□ -1.9
TRAJ40-201ENST00000390497 LOC100996750A0A140TA64 210 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 A6NCN8 305 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 TARM1B6A8C7 271 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 GTPBP1O00178 669 aaKnown RBP3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 NARSO43776 548 aaKnown RBP3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 ZNF202O95125 648 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 URODP06132 367 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 LCKP06239 509 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 HNRNPCP07910 306 aaKnown RBP eCLIP3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 CD63P08962 238 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 AKR1A1P14550 325 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 CDH2P19022 906 aaPredicted RBP3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 TACR3P29371 465 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 CHRNA5P30532 468 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 ABCD1P33897 745 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 MTNR1AP48039 350 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 DRG2P55039 364 aaKnown RBP3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 PRAMEP78395 509 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 SIM1P81133 766 aaPredicted RBP3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 NUCB1Q02818 461 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 PUM1Q14671 1186 aaKnown RBP eCLIP3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 MEA1Q16626 185 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 GSTA3Q16772 222 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 CERKLQ49MI3 558 aaPredicted RBP3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 SH2D4BQ5SQS7 431 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 CC2D1BQ5T0F9 858 aaKnown RBP3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 FAM205BPQ63HN1 556 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 LAIR1Q6GTX8 287 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 DHRS13Q6UX07 377 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 KRBA2Q6ZNG9 492 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 PRSS45Q7RTY3 260 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 VRK3Q8IV63 474 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 CPXM2Q8N436 756 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 PAQR4Q8N4S7 273 aaPredicted RBP3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 EXD3Q8N9H8 876 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 METTL6Q8TCB7 284 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 NEK9Q8TD19 979 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 HSPH1Q92598 858 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 USP6NLQ92738 828 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 ELP4Q96EB1 424 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 UROC1Q96N76 676 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 NR1H4Q96RI1 486 aaPredicted RBP3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 EYA3Q99504 573 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 HDHD5Q9BXW7 423 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 KRTAP4-6Q9BYQ5 205 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 EPHX3Q9H6B9 360 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 SEMA4BQ9NPR2 832 aaPredicted RBP3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 HAUS2Q9NVX0 235 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 HCFC1R1Q9NWW0 138 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 ASIC5Q9NY37 505 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 EHD2Q9NZN4 543 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 IPO11Q9UI26 975 aaKnown RBP3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 SARDHQ9UL12 918 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 CAMK2AQ9UQM7 478 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 CLDN16Q9Y5I7 305 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 SALL3Q9BXA9 1300 aa3.18□□□□□ -1.9
TRAJ40-201ENST00000390497 OR6C68A6NDL8 312 aa3.17□□□□□ -1.9
TRAJ40-201ENST00000390497 PER2O15055 1255 aa3.17□□□□□ -1.9
TRAJ40-201ENST00000390497 DOK2O60496 412 aa3.17□□□□□ -1.9
TRAJ40-201ENST00000390497 RNF8O76064 485 aa3.17□□□□□ -1.9
TRAJ40-201ENST00000390497 GCP02774 474 aa3.17□□□□□ -1.9
TRAJ40-201ENST00000390497 SPARCP09486 303 aa3.17□□□□□ -1.9
TRAJ40-201ENST00000390497 IRF1P10914 325 aa3.17□□□□□ -1.9
TRAJ40-201ENST00000390497 ZNF8P17098 575 aaPredicted RBP3.17□□□□□ -1.9
TRAJ40-201ENST00000390497 GGT5P36269 586 aa3.17□□□□□ -1.9
TRAJ40-201ENST00000390497 CPOXP36551 454 aa3.17□□□□□ -1.9
TRAJ40-201ENST00000390497 MLH1P40692 756 aa3.17□□□□□ -1.9
TRAJ40-201ENST00000390497 GABRB2P47870 512 aa3.17□□□□□ -1.9
TRAJ40-201ENST00000390497 BLKP51451 505 aa3.17□□□□□ -1.9
TRAJ40-201ENST00000390497 RPS3AP61247 264 aaKnown RBP3.17□□□□□ -1.9
TRAJ40-201ENST00000390497 YWHAZP63104 245 aaKnown RBP3.17□□□□□ -1.9
TRAJ40-201ENST00000390497 EFNB1P98172 346 aa3.17□□□□□ -1.9
TRAJ40-201ENST00000390497 HSF1Q00613 529 aa3.17□□□□□ -1.9
TRAJ40-201ENST00000390497 B4GALNT1Q00973 533 aa3.17□□□□□ -1.9
TRAJ40-201ENST00000390497 CYP4A11Q02928 519 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms