RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 PAPSS2O95340 614 aaPredicted RBP3.68□□□□□ -1.82
TRAV40-201ENST00000390467 LCKP06239 509 aa3.68□□□□□ -1.82
TRAV40-201ENST00000390467 ARSBP15848 533 aa3.68□□□□□ -1.82
TRAV40-201ENST00000390467 PRPH2P23942 346 aa3.68□□□□□ -1.82
TRAV40-201ENST00000390467 CHRNA5P30532 468 aa3.68□□□□□ -1.82
TRAV40-201ENST00000390467 SLC16A2P36021 539 aa3.68□□□□□ -1.82
TRAV40-201ENST00000390467 STAT1P42224 750 aa3.68□□□□□ -1.82
TRAV40-201ENST00000390467 PCYT1AP49585 367 aa3.68□□□□□ -1.82
TRAV40-201ENST00000390467 ENTPD1P49961 510 aa3.68□□□□□ -1.82
TRAV40-201ENST00000390467 PDLIM4P50479 330 aa3.68□□□□□ -1.82
TRAV40-201ENST00000390467 RCAN1P53805 252 aa3.68□□□□□ -1.82
TRAV40-201ENST00000390467 DSCR9P59020 149 aa3.68□□□□□ -1.82
TRAV40-201ENST00000390467 CRYZQ08257 329 aaKnown RBP3.68□□□□□ -1.82
TRAV40-201ENST00000390467 PICALMQ13492 652 aa3.68□□□□□ -1.82
TRAV40-201ENST00000390467 PKP1Q13835 747 aa3.68□□□□□ -1.82
TRAV40-201ENST00000390467 STARD3Q14849 445 aa3.68□□□□□ -1.82
TRAV40-201ENST00000390467 DUSP6Q16828 381 aa3.68□□□□□ -1.82
TRAV40-201ENST00000390467 DCAF12L2Q5VW00 463 aa3.68□□□□□ -1.82
TRAV40-201ENST00000390467 CAPRIN2Q6IMN6 1127 aaKnown RBP3.68□□□□□ -1.82
TRAV40-201ENST00000390467 LIN54Q6MZP7 749 aa3.68□□□□□ -1.82
TRAV40-201ENST00000390467 TMEM71Q6P5X7 295 aa3.68□□□□□ -1.82
TRAV40-201ENST00000390467 RNF144BQ7Z419 303 aa3.68□□□□□ -1.82
TRAV40-201ENST00000390467 ANKS1BQ7Z6G8 1248 aa3.68□□□□□ -1.82
TRAV40-201ENST00000390467 MORC1Q86VD1 984 aa3.68□□□□□ -1.82
TRAV40-201ENST00000390467 TMEM200AQ86VY9 491 aa3.68□□□□□ -1.82
TRAV40-201ENST00000390467 FAM217AQ8IXS0 508 aa3.68□□□□□ -1.82
TRAV40-201ENST00000390467 LRRC57Q8N9N7 239 aa3.68□□□□□ -1.82
TRAV40-201ENST00000390467 FAM71BQ8TC56 605 aa3.68□□□□□ -1.82
TRAV40-201ENST00000390467 HMGB4Q8WW32 186 aa3.68□□□□□ -1.82
TRAV40-201ENST00000390467 TMEM41AQ96HV5 264 aa3.68□□□□□ -1.82
TRAV40-201ENST00000390467 LMLNQ96KR4 655 aa3.68□□□□□ -1.82
TRAV40-201ENST00000390467 APOLD1Q96LR9 279 aa3.68□□□□□ -1.82
TRAV40-201ENST00000390467 B3GNT4Q9C0J1 378 aa3.68□□□□□ -1.82
TRAV40-201ENST00000390467 ACTR5Q9H9F9 607 aaPredicted RBP3.68□□□□□ -1.82
TRAV40-201ENST00000390467 Q9N2J8 555 aa3.68□□□□□ -1.82
TRAV40-201ENST00000390467 OBP2BQ9NPH6 170 aa3.68□□□□□ -1.82
TRAV40-201ENST00000390467 PLEKHB1Q9UF11 243 aaPredicted RBP3.68□□□□□ -1.82
TRAV40-201ENST00000390467 RCE1Q9Y256 329 aa3.68□□□□□ -1.82
TRAV40-201ENST00000390467 OR6C75A6NL08 312 aa3.67□□□□□ -1.82
TRAV40-201ENST00000390467 LGALS16A8MUM7 142 aa3.67□□□□□ -1.82
TRAV40-201ENST00000390467 GRM8O00222 908 aa3.67□□□□□ -1.82
TRAV40-201ENST00000390467 CAND2O75155 1236 aa3.67□□□□□ -1.82
TRAV40-201ENST00000390467 LARGE1O95461 756 aa3.67□□□□□ -1.82
TRAV40-201ENST00000390467 MYL1P05976 194 aa3.67□□□□□ -1.82
TRAV40-201ENST00000390467 CYP21A2P08686 494 aa3.67□□□□□ -1.82
TRAV40-201ENST00000390467 KLRC2P26717 231 aa3.67□□□□□ -1.82
TRAV40-201ENST00000390467 PNLIPRP1P54315 467 aa3.67□□□□□ -1.82
TRAV40-201ENST00000390467 TBX4P57082 545 aa3.67□□□□□ -1.82
TRAV40-201ENST00000390467 SPARCL1Q14515 664 aa3.67□□□□□ -1.82
TRAV40-201ENST00000390467 NFATC4Q14934 902 aa3.67□□□□□ -1.82
TRAV40-201ENST00000390467 ZNF569Q5MCW4 686 aa3.67□□□□□ -1.82
TRAV40-201ENST00000390467 PDXDC1Q6P996 788 aa3.67□□□□□ -1.82
TRAV40-201ENST00000390467 AAGABQ6PD74 315 aa3.67□□□□□ -1.82
TRAV40-201ENST00000390467 Q6ZTC4 211 aa3.67□□□□□ -1.82
TRAV40-201ENST00000390467 NPAS1Q99742 590 aa3.67□□□□□ -1.82
TRAV40-201ENST00000390467 HIF1ANQ9NWT6 349 aa3.67□□□□□ -1.82
TRAV40-201ENST00000390467 FZD10Q9ULW2 581 aa3.67□□□□□ -1.82
TRAV40-201ENST00000390467 DAPP1Q9UN19 280 aa3.67□□□□□ -1.82
TRAV40-201ENST00000390467 PCDHA10Q9Y5I2 948 aa3.67□□□□□ -1.82
TRAV40-201ENST00000390467 KRT18P05783 430 aaKnown RBP3.66□□□□□ -1.82
TRAV40-201ENST00000390467 HOXC6P09630 235 aa3.66□□□□□ -1.82
TRAV40-201ENST00000390467 LYL1P12980 280 aa3.66□□□□□ -1.82
TRAV40-201ENST00000390467 TYK2P29597 1187 aa3.66□□□□□ -1.82
TRAV40-201ENST00000390467 TECP42680 631 aa3.66□□□□□ -1.82
TRAV40-201ENST00000390467 PPP3CCP48454 512 aa3.66□□□□□ -1.82
TRAV40-201ENST00000390467 ZP1P60852 638 aa3.66□□□□□ -1.82
TRAV40-201ENST00000390467 GALNT1Q10472 559 aaPredicted RBP3.66□□□□□ -1.82
TRAV40-201ENST00000390467 HNF4GQ14541 408 aa3.66□□□□□ -1.82
TRAV40-201ENST00000390467 PRAMEF19Q5SWL8 479 aa3.66□□□□□ -1.82
TRAV40-201ENST00000390467 FNBP1LQ5T0N5 605 aa3.66□□□□□ -1.82
TRAV40-201ENST00000390467 CCDC181Q5TID7 509 aa3.66□□□□□ -1.82
TRAV40-201ENST00000390467 NADSYN1Q6IA69 706 aa3.66□□□□□ -1.82
TRAV40-201ENST00000390467 GGT6Q6P531 493 aa3.66□□□□□ -1.82
TRAV40-201ENST00000390467 FAM83HQ6ZRV2 1179 aaPredicted RBP3.66□□□□□ -1.82
TRAV40-201ENST00000390467 ENDOVQ8N8Q3 282 aaKnown RBP3.66□□□□□ -1.82
TRAV40-201ENST00000390467 LMO3Q8TAP4 145 aa3.66□□□□□ -1.82
TRAV40-201ENST00000390467 TNIP3Q96KP6 325 aa3.66□□□□□ -1.82
TRAV40-201ENST00000390467 RTKNQ9BST9 563 aa3.66□□□□□ -1.82
TRAV40-201ENST00000390467 KATNAL1Q9BW62 490 aa3.66□□□□□ -1.82
TRAV40-201ENST00000390467 HIPK3Q9H422 1215 aa3.66□□□□□ -1.82
TRAV40-201ENST00000390467 KLHL31Q9H511 634 aa3.66□□□□□ -1.82
TRAV40-201ENST00000390467 CHST12Q9NRB3 414 aa3.66□□□□□ -1.82
TRAV40-201ENST00000390467 SLC22A11Q9NSA0 550 aa3.66□□□□□ -1.82
TRAV40-201ENST00000390467 LIN7CQ9NUP9 197 aaKnown RBP3.66□□□□□ -1.82
TRAV40-201ENST00000390467 TMEM248Q9NWD8 314 aa3.66□□□□□ -1.82
TRAV40-201ENST00000390467 WNT16Q9UBV4 365 aa3.66□□□□□ -1.82
TRAV40-201ENST00000390467 A0A087WV62 115 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 A0A0A0MQY5 61 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 GOLGA6L3A6NEY3 463 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 NPIPB13A6NJU9 1138 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 NPIPB5A8MRT5 1133 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 NPIPB4C9JG80 1138 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 ACOT8O14734 319 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 PPP1R3DO95685 299 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 UNGP13051 313 aaPredicted RBP3.65□□□□□ -1.83
TRAV40-201ENST00000390467 PDIA3P30101 505 aaKnown RBP3.65□□□□□ -1.83
TRAV40-201ENST00000390467 CYP2J2P51589 502 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 CDK18Q07002 472 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 PTK2BQ14289 1009 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 SHBQ15464 509 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms