RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 GRIA4P48058 902 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 NUP107P57740 925 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 TNS4Q8IZW8 715 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 FBXL18Q96ME1 805 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 FBXO44Q9H4M3 255 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 PRRG1O14668 218 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 KPNA6O60684 536 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 VNN1O95497 513 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 MLNP12872 115 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 FOXN2P32314 431 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 CYP2R1Q6VVX0 501 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 STRADAQ7RTN6 431 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 BHLHE22Q8NFJ8 381 aaPredicted RBP16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 ZNF516Q92618 1163 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 C18orf25Q96B23 403 aaPredicted RBP16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 RMND5BQ96G75 393 aaPredicted RBP16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 B3GNT5Q9BYG0 378 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 MAN1C1Q9NR34 630 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 ZNF180Q9UJW8 692 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 MYH8P13535 1937 aa16.41■□□□□ 0.22
PTPRN2-201ENST00000389413 HOXB8P17481 243 aaPredicted RBP16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 RAB27AP51159 221 aa16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 ZSCAN18Q8TBC5 510 aaPredicted RBP16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 CDCA5Q96FF9 252 aa16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 GAD1Q99259 594 aa16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 COG4Q9H9E3 785 aa16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 SCUBE2Q9NQ36 999 aa16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 ARHGEF3Q9NR81 526 aa16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 FETUBQ9UGM5 382 aa16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 CHKBQ9Y259 395 aa16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 CFAP99D6REC4 459 aa16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 PSMD12O00232 456 aaPredicted RBP16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 NUMBP49757 651 aa16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 PPIL2Q13356 520 aa16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 SIAH1Q8IUQ4 282 aa16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 FBXO39Q8N4B4 442 aa16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 MTMR14Q8NCE2 650 aa16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 CSPG4P5Q96PW8 444 aa16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 SEPT3Q9UH03 358 aa16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 HBS1LQ9Y450 684 aaKnown RBP16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 LIN7AO14910 233 aaPredicted RBP16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 WDR4P57081 412 aaKnown RBP16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 MRPS5P82675 430 aaKnown RBP16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 GBE1Q04446 702 aa16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 FRG1Q14331 258 aaKnown RBP16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 SYTL3Q4VX76 610 aa16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 ANKS6Q68DC2 871 aa16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 PLD3Q8IV08 490 aa16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 BORCS6Q96GS4 357 aa16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 DACH2Q96NX9 599 aa16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 ASB2Q96Q27 587 aa16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 NR1H4Q96RI1 486 aaPredicted RBP16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 KCTD14Q9BQ13 255 aaPredicted RBP16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 DENND2DQ9H6A0 471 aaPredicted RBP16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 CHCHD3Q9NX63 227 aaKnown RBP16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 CPA4Q9UI42 421 aa16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 FGF10O15520 208 aaPredicted RBP16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 DAB1O75553 588 aa16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 ATP5F1P24539 256 aaPredicted RBP16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 SLC41A1Q8IVJ1 513 aa16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 TAGAPQ8N103 731 aa16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 PCDH20Q8N6Y1 951 aaKnown RBP16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 RP9Q8TA86 221 aaKnown RBP16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 RNF217Q8TC41 542 aa16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 GLT1D1Q96MS3 346 aa16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 FOPNLQ96NB1 174 aa16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 PNPOQ9NVS9 261 aa16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 ZNF229Q9UJW7 825 aa16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 FAM32AQ9Y421 112 aaKnown RBP16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 ROBO1Q9Y6N7 1651 aa16.4■□□□□ 0.22
PTPRN2-201ENST00000389413 SCNN1BP51168 640 aa16.39■□□□□ 0.21
PTPRN2-201ENST00000389413 ARHGEF7Q14155 803 aa16.39■□□□□ 0.21
PTPRN2-201ENST00000389413 SLC25A52Q3SY17 297 aa16.39■□□□□ 0.21
PTPRN2-201ENST00000389413 LBX2Q6XYB7 198 aa16.39■□□□□ 0.21
PTPRN2-201ENST00000389413 HORMAD1Q86X24 394 aa16.39■□□□□ 0.21
PTPRN2-201ENST00000389413 VPS37AQ8NEZ2 397 aa16.39■□□□□ 0.21
PTPRN2-201ENST00000389413 RDH11Q8TC12 318 aa16.39■□□□□ 0.21
PTPRN2-201ENST00000389413 ZBED2Q9BTP6 218 aa16.39■□□□□ 0.21
PTPRN2-201ENST00000389413 CLPBQ9H078 707 aa16.39■□□□□ 0.21
PTPRN2-201ENST00000389413 SDCBP2Q9H190 292 aa16.39■□□□□ 0.21
PTPRN2-201ENST00000389413 TAS2R13Q9NYV9 303 aa16.39■□□□□ 0.21
PTPRN2-201ENST00000389413 SERPINH1P50454 418 aaKnown RBP16.39■□□□□ 0.21
PTPRN2-201ENST00000389413 C9orf131Q5VYM1 1079 aa16.39■□□□□ 0.21
PTPRN2-201ENST00000389413 PIWIL4Q7Z3Z4 852 aaKnown RBP16.39■□□□□ 0.21
PTPRN2-201ENST00000389413 MIER2Q8N344 545 aa16.39■□□□□ 0.21
PTPRN2-201ENST00000389413 ADGRE3Q9BY15 652 aa16.39■□□□□ 0.21
PTPRN2-201ENST00000389413 DERAQ9Y315 318 aa16.39■□□□□ 0.21
PTPRN2-201ENST00000389413 KPNA1P52294 538 aaPredicted RBP16.39■□□□□ 0.21
PTPRN2-201ENST00000389413 CHN2P52757 468 aa16.39■□□□□ 0.21
PTPRN2-201ENST00000389413 CDH18Q13634 790 aa16.39■□□□□ 0.21
PTPRN2-201ENST00000389413 INSCQ1MX18 579 aa16.39■□□□□ 0.21
PTPRN2-201ENST00000389413 GJC2Q5T442 439 aaPredicted RBP16.39■□□□□ 0.21
PTPRN2-201ENST00000389413 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.39■□□□□ 0.21
PTPRN2-201ENST00000389413 LPCAT2Q7L5N7 544 aa16.39■□□□□ 0.21
PTPRN2-201ENST00000389413 CMC1Q7Z7K0 106 aa16.39■□□□□ 0.21
PTPRN2-201ENST00000389413 MYO1HQ8N1T3 1032 aa16.39■□□□□ 0.21
PTPRN2-201ENST00000389413 BANPQ8N9N5 519 aa16.39■□□□□ 0.21
PTPRN2-201ENST00000389413 RAET1EQ8TD07 263 aa16.39■□□□□ 0.21
PTPRN2-201ENST00000389413 ABCC13Q9NSE7 274 aa16.39■□□□□ 0.21
PTPRN2-201ENST00000389413 UTP6Q9NYH9 597 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms