RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 NFIXQ14938 502 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 SLC9B1Q4ZJI4 515 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 PRR16Q569H4 304 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 TUBA3EQ6PEY2 450 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 SH2D5Q6ZV89 423 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 MINDY2Q8NBR6 621 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 NPAS2Q99743 824 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 TMEM246Q9BRR3 403 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 COG4Q9H9E3 785 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.32■□□□□ 0.04
VLDLR-202ENST00000382099 MTRRQ9UBK8 725 aa15.32■□□□□ 0.04
VLDLR-202ENST00000382099 TISP43B9A030 160 aa15.31■□□□□ 0.04
VLDLR-202ENST00000382099 TLR3O15455 904 aaKnown RBP15.31■□□□□ 0.04
VLDLR-202ENST00000382099 BCAS2O75934 225 aaPredicted RBP15.31■□□□□ 0.04
VLDLR-202ENST00000382099 GFAPP14136 432 aa15.31■□□□□ 0.04
VLDLR-202ENST00000382099 L1CAMP32004 1257 aa15.31■□□□□ 0.04
VLDLR-202ENST00000382099 PTPN9P43378 593 aa15.31■□□□□ 0.04
VLDLR-202ENST00000382099 MAP3K7CLP57077 242 aa15.31■□□□□ 0.04
VLDLR-202ENST00000382099 TRIM25Q14258 630 aaKnown RBP15.31■□□□□ 0.04
VLDLR-202ENST00000382099 N4BP2L1Q5TBK1 243 aaPredicted RBP15.31■□□□□ 0.04
VLDLR-202ENST00000382099 PXDC1Q5TGL8 231 aa15.31■□□□□ 0.04
VLDLR-202ENST00000382099 SDE2Q6IQ49 451 aa15.31■□□□□ 0.04
VLDLR-202ENST00000382099 CHSY3Q70JA7 882 aa15.31■□□□□ 0.04
VLDLR-202ENST00000382099 KREMEN1Q96MU8 473 aa15.31■□□□□ 0.04
VLDLR-202ENST00000382099 DHRS9Q9BPW9 319 aa15.31■□□□□ 0.04
VLDLR-202ENST00000382099 EMILIN2Q9BXX0 1053 aa15.31■□□□□ 0.04
VLDLR-202ENST00000382099 ACSS2Q9NR19 701 aa15.31■□□□□ 0.04
VLDLR-202ENST00000382099 GOLGA8JA6NMD2 632 aa15.31■□□□□ 0.04
VLDLR-202ENST00000382099 A8MV72 311 aaPredicted RBP15.31■□□□□ 0.04
VLDLR-202ENST00000382099 B4GAT1O43505 415 aa15.31■□□□□ 0.04
VLDLR-202ENST00000382099 DYRK3O43781 588 aa15.31■□□□□ 0.04
VLDLR-202ENST00000382099 KRT6AP02538 564 aa15.31■□□□□ 0.04
VLDLR-202ENST00000382099 KRT6BP04259 564 aa15.31■□□□□ 0.04
VLDLR-202ENST00000382099 WEE1P30291 646 aa15.31■□□□□ 0.04
VLDLR-202ENST00000382099 RPL22P35268 128 aaKnown RBP15.31■□□□□ 0.04
VLDLR-202ENST00000382099 VAMP7P51809 220 aa15.31■□□□□ 0.04
VLDLR-202ENST00000382099 MCOLN2Q8IZK6 566 aa15.31■□□□□ 0.04
VLDLR-202ENST00000382099 APPL2Q8NEU8 664 aa15.31■□□□□ 0.04
VLDLR-202ENST00000382099 FBXL18Q96ME1 805 aa15.31■□□□□ 0.04
VLDLR-202ENST00000382099 DOK1Q99704 481 aa15.31■□□□□ 0.04
VLDLR-202ENST00000382099 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.31■□□□□ 0.04
VLDLR-202ENST00000382099 CNOT11Q9UKZ1 510 aaKnown RBP15.31■□□□□ 0.04
VLDLR-202ENST00000382099 USP17L5A8MUK1 530 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 NRP1O14786 923 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 RIMBP2O15034 1052 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 PSTPIP1O43586 416 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 VAPBO95292 243 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 HOXD10P28358 340 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 ALDH4A1P30038 563 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 CCND2P30279 289 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 POLD3Q15054 466 aaPredicted RBP15.3■□□□□ 0.04
VLDLR-202ENST00000382099 NFE2Q16621 373 aaPredicted RBP15.3■□□□□ 0.04
VLDLR-202ENST00000382099 GJC2Q5T442 439 aaPredicted RBP15.3■□□□□ 0.04
VLDLR-202ENST00000382099 CRTC3Q6UUV7 619 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 FAM71DQ8N9W8 422 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 LMO3Q8TAP4 145 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 OR52B2Q96RD2 323 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 ADNPQ9H2P0 1102 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 SCUBE2Q9NQ36 999 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 TBC1D22BQ9NU19 505 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 TMEM9Q9P0T7 183 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 PTBP2Q9UKA9 531 aaKnown RBP15.3■□□□□ 0.04
VLDLR-202ENST00000382099 DOT1LQ8TEK3 1739 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 RGSL1A5PLK6 1076 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 RFPL2O75678 378 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 PSMC5P62195 406 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 SPCS2Q15005 226 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 ODR4Q5SWX8 454 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 LYPD8Q6UX82 237 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 ARCQ7LC44 396 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 ADCK1Q86TW2 530 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 C10orf107Q8IVU9 208 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 BRSK2Q8IWQ3 736 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 FAM71AQ8IYT1 594 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 KATNAL2Q8IYT4 538 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 PARP8Q8N3A8 854 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 TFAP2CQ92754 450 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 RMDN1Q96DB5 314 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 NACC1Q96RE7 527 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 DUS2Q9NX74 493 aaKnown RBP15.3■□□□□ 0.04
VLDLR-202ENST00000382099 DNMT3BQ9UBC3 853 aaKnown RBP15.3■□□□□ 0.04
VLDLR-202ENST00000382099 SPATA31A1Q5TZJ5 1347 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 A0A1W2PQ72 361 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 RFPL1O75677 317 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 NME5P56597 212 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 ATP6V0D1P61421 351 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 SLC10A2Q12908 348 aaPredicted RBP15.3■□□□□ 0.04
VLDLR-202ENST00000382099 NHSL2Q5HYW2 709 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 LRRC8EQ6NSJ5 796 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 TRAF7Q6Q0C0 670 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 TRMT1LQ7Z2T5 733 aaKnown RBP15.3■□□□□ 0.04
VLDLR-202ENST00000382099 PDPRQ8NCN5 879 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 ATL1Q8WXF7 558 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 C8orf48Q96LL4 319 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 ZNF560Q96MR9 790 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 TCF7L2Q9NQB0 619 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 ZHX2Q9Y6X8 837 aa15.3■□□□□ 0.04
VLDLR-202ENST00000382099 ROBO3Q96MS0 1386 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 USP17L15C9J2P7 530 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 USP17L13C9JLJ4 530 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms