RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 RAB6BQ9NRW1 208 aa9.15□□□□□ -0.95
GPNMB-202ENST00000381990 CLIC5Q9NZA1 410 aa9.15□□□□□ -0.95
GPNMB-202ENST00000381990 PCSK1NQ9UHG2 260 aa9.15□□□□□ -0.95
GPNMB-202ENST00000381990 BCAP29Q9UHQ4 241 aa9.15□□□□□ -0.95
GPNMB-202ENST00000381990 DMTF1Q9Y222 760 aa9.15□□□□□ -0.95
GPNMB-202ENST00000381990 THSD7BQ9C0I4 1608 aa9.15□□□□□ -0.95
GPNMB-202ENST00000381990 FAM159BA6NKW6 160 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 PAPSS1O43252 624 aaPredicted RBP9.14□□□□□ -0.95
GPNMB-202ENST00000381990 ZNF623O75123 536 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 GABBR2O75899 941 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 TOMM70O94826 608 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 ENDOD1O94919 500 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 SMIM18P0DKX4 95 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 DESP17661 470 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 ADORA2BP29275 332 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 SCNN1AP37088 669 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 ACADSBP45954 432 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 HSPA13P48723 471 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 RPL34P49207 117 aaKnown RBP9.14□□□□□ -0.95
GPNMB-202ENST00000381990 MTTPP55157 894 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 ADRM1Q16186 407 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 FASTKD1Q53R41 847 aaKnown RBP9.14□□□□□ -0.95
GPNMB-202ENST00000381990 RARS2Q5T160 578 aaKnown RBP9.14□□□□□ -0.95
GPNMB-202ENST00000381990 MBLAC2Q68D91 279 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 C1orf228Q6PIY5 440 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 TMC7Q7Z402 723 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 RNF180Q86T96 592 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 OSTM1Q86WC4 334 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 SCUBE3Q8IX30 993 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 AHI1Q8N157 1196 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 TAB3Q8N5C8 712 aaPredicted RBP9.14□□□□□ -0.95
GPNMB-202ENST00000381990 B3GALNT2Q8NCR0 500 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 DDI1Q8WTU0 396 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 CALN1Q9BXU9 219 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 ETNK2Q9NVF9 386 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 PADI3Q9ULW8 664 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 ARHGAP26Q9UNA1 814 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 PSMD13Q9UNM6 376 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 DTNAQ9Y4J8 743 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 ARL5CA6NH57 179 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 CXorf49A8MYA2 514 aaPredicted RBP9.14□□□□□ -0.95
GPNMB-202ENST00000381990 GLRA3O75311 464 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 GRAP2O75791 330 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 CD48P09326 243 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 CD52P31358 61 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 SLC1A6P48664 564 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 EPHB1P54762 984 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 ITGA7Q13683 1181 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 GRAMD1BQ3KR37 738 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 FSCBQ5H9T9 825 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 ZFP1Q6P2D0 407 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 AGMOQ6ZNB7 445 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 SLC2A14Q8TDB8 520 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 KHSRPQ92945 711 aaKnown RBP eCLIP9.14□□□□□ -0.95
GPNMB-202ENST00000381990 LPPQ93052 612 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 NMD3Q96D46 503 aaKnown RBP9.14□□□□□ -0.95
GPNMB-202ENST00000381990 HSFY1Q96LI6 401 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 HNRNPABQ99729 332 aaKnown RBP9.14□□□□□ -0.95
GPNMB-202ENST00000381990 ZNF696Q9H7X3 374 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 NOD1Q9Y239 953 aa9.14□□□□□ -0.95
GPNMB-202ENST00000381990 TXNDC9O14530 226 aa9.13□□□□□ -0.95
GPNMB-202ENST00000381990 GABRDO14764 452 aa9.13□□□□□ -0.95
GPNMB-202ENST00000381990 VILLO15195 856 aa9.13□□□□□ -0.95
GPNMB-202ENST00000381990 PRPSAP2O60256 369 aa9.13□□□□□ -0.95
GPNMB-202ENST00000381990 AVILO75366 819 aa9.13□□□□□ -0.95
GPNMB-202ENST00000381990 SERPINE1P05121 402 aa9.13□□□□□ -0.95
GPNMB-202ENST00000381990 TFAP2AP05549 437 aa9.13□□□□□ -0.95
GPNMB-202ENST00000381990 SDC4P31431 198 aa9.13□□□□□ -0.95
GPNMB-202ENST00000381990 RPL9P32969 192 aaKnown RBP9.13□□□□□ -0.95
GPNMB-202ENST00000381990 MAGEA3P43357 314 aa9.13□□□□□ -0.95
GPNMB-202ENST00000381990 ALDH1A3P47895 512 aa9.13□□□□□ -0.95
GPNMB-202ENST00000381990 ERFP50548 548 aa9.13□□□□□ -0.95
GPNMB-202ENST00000381990 ACLYP53396 1101 aa9.13□□□□□ -0.95
GPNMB-202ENST00000381990 USP46P62068 366 aa9.13□□□□□ -0.95
GPNMB-202ENST00000381990 CREB5Q02930 508 aa9.13□□□□□ -0.95
GPNMB-202ENST00000381990 CYLC2Q14093 348 aaPredicted RBP9.13□□□□□ -0.95
GPNMB-202ENST00000381990 DSC3Q14574 896 aa9.13□□□□□ -0.95
GPNMB-202ENST00000381990 TAF5Q15542 800 aa9.13□□□□□ -0.95
GPNMB-202ENST00000381990 C15orf59Q2T9L4 293 aaPredicted RBP9.13□□□□□ -0.95
GPNMB-202ENST00000381990 USP41Q3LFD5 358 aa9.13□□□□□ -0.95
GPNMB-202ENST00000381990 CCDC14Q49A88 953 aa9.13□□□□□ -0.95
GPNMB-202ENST00000381990 RALGPS1Q5JS13 557 aa9.13□□□□□ -0.95
GPNMB-202ENST00000381990 FAM26DQ5JW98 314 aa9.13□□□□□ -0.95
GPNMB-202ENST00000381990 SH3PXD2AQ5TCZ1 1133 aa9.13□□□□□ -0.95
GPNMB-202ENST00000381990 WSCD1Q658N2 575 aa9.13□□□□□ -0.95
GPNMB-202ENST00000381990 SLC26A9Q7LBE3 791 aa9.13□□□□□ -0.95
GPNMB-202ENST00000381990 CAND1Q86VP6 1230 aaKnown RBP9.13□□□□□ -0.95
GPNMB-202ENST00000381990 MAP7D3Q8IWC1 876 aa9.13□□□□□ -0.95
GPNMB-202ENST00000381990 PQLC1Q8N2U9 271 aa9.13□□□□□ -0.95
GPNMB-202ENST00000381990 HSPH1Q92598 858 aa9.13□□□□□ -0.95
GPNMB-202ENST00000381990 SENP8Q96LD8 212 aa9.13□□□□□ -0.95
GPNMB-202ENST00000381990 PEBP4Q96S96 227 aa9.13□□□□□ -0.95
GPNMB-202ENST00000381990 ZNF395Q9H8N7 513 aaPredicted RBP9.13□□□□□ -0.95
GPNMB-202ENST00000381990 PADI4Q9UM07 663 aa9.13□□□□□ -0.95
GPNMB-202ENST00000381990 PRPF19Q9UMS4 504 aaKnown RBP9.13□□□□□ -0.95
GPNMB-202ENST00000381990 DNAJC16Q9Y2G8 782 aa9.13□□□□□ -0.95
GPNMB-202ENST00000381990 H3BNX3 289 aa9.13□□□□□ -0.95
GPNMB-202ENST00000381990 XPO1O14980 1071 aaKnown RBP9.13□□□□□ -0.95
GPNMB-202ENST00000381990 PFDN1O60925 122 aa9.13□□□□□ -0.95
GPNMB-202ENST00000381990 CPA3P15088 417 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms