RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 LINC00471Q8N535 108 aa4.97□□□□□ -1.61
PTPRD-203ENST00000381196 TAB3Q8N5C8 712 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-203ENST00000381196 CNDP1Q96KN2 507 aa4.97□□□□□ -1.61
PTPRD-203ENST00000381196 SP110Q9HB58 689 aa4.97□□□□□ -1.61
PTPRD-203ENST00000381196 PRDM8Q9NQV8 689 aa4.97□□□□□ -1.61
PTPRD-203ENST00000381196 FAM86C1Q9NVL1 165 aa4.97□□□□□ -1.61
PTPRD-203ENST00000381196 MAT2BQ9NZL9 334 aa4.97□□□□□ -1.61
PTPRD-203ENST00000381196 COQ6Q9Y2Z9 468 aa4.97□□□□□ -1.61
PTPRD-203ENST00000381196 PPP2R3BQ9Y5P8 575 aa4.97□□□□□ -1.61
PTPRD-203ENST00000381196 CNTNAP4Q9C0A0 1308 aa4.96□□□□□ -1.61
PTPRD-203ENST00000381196 C17orf102A2RUQ5 167 aa4.96□□□□□ -1.61
PTPRD-203ENST00000381196 RAB19A4D1S5 217 aa4.96□□□□□ -1.61
PTPRD-203ENST00000381196 ZW10O43264 779 aa4.96□□□□□ -1.61
PTPRD-203ENST00000381196 DNAJB6O75190 326 aa4.96□□□□□ -1.61
PTPRD-203ENST00000381196 S100A6P06703 90 aa4.96□□□□□ -1.61
PTPRD-203ENST00000381196 ITGALP20701 1170 aa4.96□□□□□ -1.61
PTPRD-203ENST00000381196 IFNGR2P38484 337 aa4.96□□□□□ -1.61
PTPRD-203ENST00000381196 HLFQ16534 295 aa4.96□□□□□ -1.61
PTPRD-203ENST00000381196 SYT16Q17RD7 645 aa4.96□□□□□ -1.61
PTPRD-203ENST00000381196 CHADLQ6NUI6 762 aa4.96□□□□□ -1.61
PTPRD-203ENST00000381196 DARS2Q6PI48 645 aaKnown RBP4.96□□□□□ -1.61
PTPRD-203ENST00000381196 PADI6Q6TGC4 694 aa4.96□□□□□ -1.61
PTPRD-203ENST00000381196 OOSP2Q86WS3 158 aa4.96□□□□□ -1.61
PTPRD-203ENST00000381196 MARVELD2Q8N4S9 558 aa4.96□□□□□ -1.61
PTPRD-203ENST00000381196 C19orf18Q8NEA5 215 aa4.96□□□□□ -1.61
PTPRD-203ENST00000381196 TRIM54Q9BYV2 358 aa4.96□□□□□ -1.61
PTPRD-203ENST00000381196 MYLK2Q9H1R3 596 aa4.96□□□□□ -1.61
PTPRD-203ENST00000381196 RIBC2Q9H4K1 309 aa4.96□□□□□ -1.61
PTPRD-203ENST00000381196 PCIF1Q9H4Z3 704 aa4.96□□□□□ -1.61
PTPRD-203ENST00000381196 SENP2Q9HC62 589 aa4.96□□□□□ -1.61
PTPRD-203ENST00000381196 NECTIN3Q9NQS3 549 aa4.96□□□□□ -1.61
PTPRD-203ENST00000381196 ERAP1Q9NZ08 941 aa4.96□□□□□ -1.61
PTPRD-203ENST00000381196 TLL2Q9Y6L7 1015 aa4.96□□□□□ -1.61
PTPRD-203ENST00000381196 H7C4K7 107 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 DNALI1O14645 258 aaPredicted RBP4.96□□□□□ -1.62
PTPRD-203ENST00000381196 FKTNO75072 461 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 MOCS2O96007 188 aaPredicted RBP4.96□□□□□ -1.62
PTPRD-203ENST00000381196 HLA-FP30511 346 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 KCNK10P57789 538 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 RTP1P59025 263 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 SF3B3Q15393 1217 aaKnown RBP4.96□□□□□ -1.62
PTPRD-203ENST00000381196 FAXCQ5TGI0 409 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 TTI2Q6NXR4 508 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 PI16Q6UXB8 463 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 HACD2Q6Y1H2 254 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 SH3RF1Q7Z6J0 888 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 TAGAPQ8N103 731 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 APPL2Q8NEU8 664 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 RBM4BQ9BQ04 359 aaKnown RBP4.96□□□□□ -1.62
PTPRD-203ENST00000381196 RBM4Q9BWF3 364 aaKnown RBP4.96□□□□□ -1.62
PTPRD-203ENST00000381196 FAIMQ9NVQ4 179 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 ERVK-11Q9UQG0 969 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 AQP12BA6NM10 295 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 EML1O00423 815 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 RAD51BO15315 384 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 PQBP1O60828 265 aaKnown RBP4.96□□□□□ -1.62
PTPRD-203ENST00000381196 RHOBTB1O94844 696 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 LYNP07948 512 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 BMP1P13497 986 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 ADORA2BP29275 332 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 CYP2C18P33260 490 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 PRCPP42785 496 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 ALDH1A3P47895 512 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 TRAF3Q13114 568 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 SPANXN3Q5MJ09 141 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 CACHD1Q5VU97 1274 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 RAB43Q86YS6 212 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 AQP12AQ8IXF9 295 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 FBXW8Q8N3Y1 598 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 TRUB1Q8WWH5 349 aaKnown RBP4.96□□□□□ -1.62
PTPRD-203ENST00000381196 HAVCR1Q96D42 359 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 CDK5RAP1Q96SZ6 601 aaKnown RBP4.96□□□□□ -1.62
PTPRD-203ENST00000381196 TRIM51Q9BSJ1 452 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 MRPL4Q9BYD3 311 aaKnown RBP4.96□□□□□ -1.62
PTPRD-203ENST00000381196 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.96□□□□□ -1.62
PTPRD-203ENST00000381196 GPR75-ASB3A0A0A6YYF3 556 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 E9PBE3 544 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 LDLRP01130 860 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 AMHP03971 560 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 PGAM1P18669 254 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 FAUP35544 74 aaKnown RBP4.96□□□□□ -1.62
PTPRD-203ENST00000381196 ZNF235Q14590 738 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 PTGES3Q15185 160 aaKnown RBP4.96□□□□□ -1.62
PTPRD-203ENST00000381196 INO80DQ53TQ3 878 aaPredicted RBP4.96□□□□□ -1.62
PTPRD-203ENST00000381196 THEMIS2Q5TEJ8 643 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 SLX4IPQ5VYV7 408 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 ANKMY2Q8IV38 441 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 CYGBQ8WWM9 190 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 IFT43Q96FT9 208 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 COLEC11Q9BWP8 271 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 YIPF2Q9BWQ6 316 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 SPATA9Q9BWV2 254 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 FNIP2Q9P278 1114 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 ASB3Q9Y575 518 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 CITO14578 2027 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 CNOT1A5YKK6 2376 aaKnown RBP4.96□□□□□ -1.62
PTPRD-203ENST00000381196 MCIDASD6RGH6 385 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 ECDO95905 644 aaPredicted RBP4.96□□□□□ -1.62
PTPRD-203ENST00000381196 AKAP5P24588 427 aa4.96□□□□□ -1.62
PTPRD-203ENST00000381196 FLT3P36888 993 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms