RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 RMND5BQ96G75 393 aaPredicted RBP14.14□□□□□ -0.15
SDC1-202ENST00000381150 SMARCAD1Q9H4L7 1026 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 BARX2Q9UMQ3 279 aaPredicted RBP14.14□□□□□ -0.15
SDC1-202ENST00000381150 TNFSF13BQ9Y275 285 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 TBC1D30Q9Y2I9 924 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 USP12O75317 370 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 MCF2P10911 925 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 PIK3R1P27986 724 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 CLCN3P51790 818 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 PPIL2Q13356 520 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 ZNF699Q32M78 642 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 GPR107Q5VW38 600 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 GPR141Q7Z602 305 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 SGF29Q96ES7 293 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 NFKBIZQ9BYH8 718 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 BCO2Q9BYV7 579 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 CDT1Q9H211 546 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 XPNPEP3Q9NQH7 507 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 CDC14AQ9UNH5 594 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 ZSWIM8A7E2V4 1837 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 C3orf70A6NLC5 250 aaPredicted RBP14.13□□□□□ -0.15
SDC1-202ENST00000381150 AKAP10O43572 662 aa14.13□□□□□ -0.15
SDC1-202ENST00000381150 HBP1O60381 514 aa14.13□□□□□ -0.15
SDC1-202ENST00000381150 PLIN3O60664 434 aa14.13□□□□□ -0.15
SDC1-202ENST00000381150 RNASEH2AO75792 299 aaKnown RBP14.13□□□□□ -0.15
SDC1-202ENST00000381150 C22orf31O95567 290 aa14.13□□□□□ -0.15
SDC1-202ENST00000381150 TXNP10599 105 aaKnown RBP14.13□□□□□ -0.15
SDC1-202ENST00000381150 MPSTP25325 297 aa14.13□□□□□ -0.15
SDC1-202ENST00000381150 NDST2P52849 883 aa14.13□□□□□ -0.15
SDC1-202ENST00000381150 PDAP1Q13442 181 aaKnown RBP14.13□□□□□ -0.15
SDC1-202ENST00000381150 AMHR2Q16671 573 aa14.13□□□□□ -0.15
SDC1-202ENST00000381150 CCDC142Q17RM4 750 aa14.13□□□□□ -0.15
SDC1-202ENST00000381150 MAMDC4Q6UXC1 1216 aa14.13□□□□□ -0.15
SDC1-202ENST00000381150 LINC01465Q8N7H1 131 aa14.13□□□□□ -0.15
SDC1-202ENST00000381150 SDCBP2Q9H190 292 aa14.13□□□□□ -0.15
SDC1-202ENST00000381150 NOL11Q9H8H0 719 aaKnown RBP14.13□□□□□ -0.15
SDC1-202ENST00000381150 RSAD1Q9HA92 442 aa14.13□□□□□ -0.15
SDC1-202ENST00000381150 WDR41Q9HAD4 459 aa14.13□□□□□ -0.15
SDC1-202ENST00000381150 IL1RL2Q9HB29 575 aa14.13□□□□□ -0.15
SDC1-202ENST00000381150 EIF2B2P49770 351 aaKnown RBP14.13□□□□□ -0.15
SDC1-202ENST00000381150 PHEXP78562 749 aa14.13□□□□□ -0.15
SDC1-202ENST00000381150 TUBB3Q13509 450 aa14.13□□□□□ -0.15
SDC1-202ENST00000381150 OLIG2Q13516 323 aa14.13□□□□□ -0.15
SDC1-202ENST00000381150 SEPT6Q14141 434 aa14.13□□□□□ -0.15
SDC1-202ENST00000381150 KCNJ11Q14654 390 aa14.13□□□□□ -0.15
SDC1-202ENST00000381150 LDLRAP1Q5SW96 308 aa14.13□□□□□ -0.15
SDC1-202ENST00000381150 CHST15Q7LFX5 561 aaPredicted RBP14.13□□□□□ -0.15
SDC1-202ENST00000381150 AHI1Q8N157 1196 aa14.13□□□□□ -0.15
SDC1-202ENST00000381150 CCNYQ8ND76 341 aa14.13□□□□□ -0.15
SDC1-202ENST00000381150 CDCA5Q96FF9 252 aa14.13□□□□□ -0.15
SDC1-202ENST00000381150 NLRP4Q96MN2 994 aa14.13□□□□□ -0.15
SDC1-202ENST00000381150 MAGEB5Q9BZ81 275 aa14.13□□□□□ -0.15
SDC1-202ENST00000381150 STK39Q9UEW8 545 aa14.13□□□□□ -0.15
SDC1-202ENST00000381150 RAB26Q9ULW5 256 aa14.13□□□□□ -0.15
SDC1-202ENST00000381150 INO80B-WBP1J3KQ70 363 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 GLRA3O75311 464 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 ALDOAP04075 364 aaKnown RBP14.12□□□□□ -0.15
SDC1-202ENST00000381150 CXCL8P10145 99 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 ALOX15P16050 662 aaPredicted RBP14.12□□□□□ -0.15
SDC1-202ENST00000381150 PTPN7P35236 360 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 GABRB2P47870 512 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 KPNA1P52294 538 aaPredicted RBP14.12□□□□□ -0.15
SDC1-202ENST00000381150 TFDP2Q14188 446 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 KCTD2Q14681 263 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 PCLAFQ15004 111 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 NEDD8Q15843 81 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 FAM91A1Q658Y4 838 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 ARCQ7LC44 396 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 HEXIM2Q96MH2 286 aaKnown RBP14.12□□□□□ -0.15
SDC1-202ENST00000381150 PPP1R16BQ96T49 567 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 MPHOSPH6Q99547 160 aaKnown RBP14.12□□□□□ -0.15
SDC1-202ENST00000381150 GCOM2Q9BZD3 368 aaPredicted RBP14.12□□□□□ -0.15
SDC1-202ENST00000381150 INO80BQ9C086 356 aaPredicted RBP14.12□□□□□ -0.15
SDC1-202ENST00000381150 LHX5Q9H2C1 402 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 SORCS3Q9UPU3 1222 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 MYRFQ9Y2G1 1151 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 FAM149AA5PLN7 773 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 DENRO43583 198 aaKnown RBP14.12□□□□□ -0.15
SDC1-202ENST00000381150 COL6A2P12110 1019 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 ME2P23368 584 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 EEF1B2P24534 225 aaKnown RBP14.12□□□□□ -0.15
SDC1-202ENST00000381150 GJA5P36382 358 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 CSE1LP55060 971 aaKnown RBP14.12□□□□□ -0.15
SDC1-202ENST00000381150 ARHGAP1Q07960 439 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 CEACAM7Q14002 265 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 PTK2BQ14289 1009 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 C16orf89Q6UX73 402 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 SPATA6LQ8N4H0 392 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 DCLK2Q8N568 766 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 C1orf127Q8N9H9 656 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 MROH8Q9H579 483 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 FAM49BQ9NUQ9 324 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 FBXO21O94952 628 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 ZBTB11O95625 1053 aaPredicted RBP14.12□□□□□ -0.15
SDC1-202ENST00000381150 MGAT1P26572 445 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 AVPR1AP37288 418 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 POU5F1BQ06416 359 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 SLC10A2Q12908 348 aaPredicted RBP14.12□□□□□ -0.15
SDC1-202ENST00000381150 FAM187BQ17R55 369 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 ANO4Q32M45 955 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms