RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 INVSQ9Y283 1065 aa19.9■□□□□ 0.78
GTF3A-201ENST00000381140 PCDHGA2Q9Y5H1 932 aa19.9■□□□□ 0.78
GTF3A-201ENST00000381140 PCDHA13Q9Y5I0 950 aa19.9■□□□□ 0.78
GTF3A-201ENST00000381140 EPN1Q9Y6I3 576 aaPredicted RBP19.9■□□□□ 0.78
GTF3A-201ENST00000381140 A0A0D9SEW6 157 aa19.89■□□□□ 0.77
GTF3A-201ENST00000381140 EIF3CLB5ME19 914 aaKnown RBP19.89■□□□□ 0.77
GTF3A-201ENST00000381140 EEF2KO00418 725 aaKnown RBP19.89■□□□□ 0.77
GTF3A-201ENST00000381140 PROSCO94903 275 aa19.89■□□□□ 0.77
GTF3A-201ENST00000381140 NDUFA10O95299 355 aa19.89■□□□□ 0.77
GTF3A-201ENST00000381140 PLK1P53350 603 aa19.89■□□□□ 0.77
GTF3A-201ENST00000381140 WDR5BQ86VZ2 330 aa19.89■□□□□ 0.77
GTF3A-201ENST00000381140 CACUL1Q86Y37 369 aa19.89■□□□□ 0.77
GTF3A-201ENST00000381140 RFFLQ8WZ73 363 aa19.89■□□□□ 0.77
GTF3A-201ENST00000381140 NELL1Q92832 810 aa19.89■□□□□ 0.77
GTF3A-201ENST00000381140 ALG14Q96F25 216 aa19.89■□□□□ 0.77
GTF3A-201ENST00000381140 EIF3CQ99613 913 aaKnown RBP19.89■□□□□ 0.77
GTF3A-201ENST00000381140 SLC6A17Q9H1V8 727 aa19.89■□□□□ 0.77
GTF3A-201ENST00000381140 LUC7LQ9NQ29 371 aaKnown RBP19.89■□□□□ 0.77
GTF3A-201ENST00000381140 NDFIP2Q9NV92 336 aa19.89■□□□□ 0.77
GTF3A-201ENST00000381140 TMEM248Q9NWD8 314 aa19.89■□□□□ 0.77
GTF3A-201ENST00000381140 SLC25A13Q9UJS0 675 aa19.89■□□□□ 0.77
GTF3A-201ENST00000381140 INTUQ9ULD6 942 aa19.89■□□□□ 0.77
GTF3A-201ENST00000381140 NEU3Q9UQ49 428 aa19.89■□□□□ 0.77
GTF3A-201ENST00000381140 ARIH1Q9Y4X5 557 aaPredicted RBP19.89■□□□□ 0.77
GTF3A-201ENST00000381140 DAPK3O43293 454 aa19.88■□□□□ 0.77
GTF3A-201ENST00000381140 ZNF500O60304 480 aaPredicted RBP19.88■□□□□ 0.77
GTF3A-201ENST00000381140 SNAP91O60641 907 aa19.88■□□□□ 0.77
GTF3A-201ENST00000381140 LCA5LO95447 670 aa19.88■□□□□ 0.77
GTF3A-201ENST00000381140 GABRG2P18507 467 aa19.88■□□□□ 0.77
GTF3A-201ENST00000381140 HOXA6P31267 233 aa19.88■□□□□ 0.77
GTF3A-201ENST00000381140 NOP2P46087 812 aaKnown RBP19.88■□□□□ 0.77
GTF3A-201ENST00000381140 GNA12Q03113 381 aa19.88■□□□□ 0.77
GTF3A-201ENST00000381140 SULT2A1Q06520 285 aa19.88■□□□□ 0.77
GTF3A-201ENST00000381140 ENPP2Q13822 863 aa19.88■□□□□ 0.77
GTF3A-201ENST00000381140 TXNRD3NBQ6F5E7 133 aa19.88■□□□□ 0.77
GTF3A-201ENST00000381140 KIAA1324Q6UXG2 1013 aaKnown RBP19.88■□□□□ 0.77
GTF3A-201ENST00000381140 RHOT2Q8IXI1 618 aa19.88■□□□□ 0.77
GTF3A-201ENST00000381140 ZBTB44Q8NCP5 570 aa19.88■□□□□ 0.77
GTF3A-201ENST00000381140 MRGPRX3Q96LB0 322 aa19.88■□□□□ 0.77
GTF3A-201ENST00000381140 PSMB7Q99436 277 aa19.88■□□□□ 0.77
GTF3A-201ENST00000381140 TMEM245Q9H330 911 aa19.88■□□□□ 0.77
GTF3A-201ENST00000381140 CATSPERBQ9H7T0 1116 aa19.88■□□□□ 0.77
GTF3A-201ENST00000381140 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.88■□□□□ 0.77
GTF3A-201ENST00000381140 ZNF212Q9UDV6 495 aa19.88■□□□□ 0.77
GTF3A-201ENST00000381140 SLCO3A1Q9UIG8 710 aa19.88■□□□□ 0.77
GTF3A-201ENST00000381140 OR51B4Q9Y5P0 310 aa19.88■□□□□ 0.77
GTF3A-201ENST00000381140 ADGRG1Q9Y653 693 aa19.88■□□□□ 0.77
GTF3A-201ENST00000381140 CEP192Q8TEP8 1941 aa19.88■□□□□ 0.77
GTF3A-201ENST00000381140 THADAQ6YHU6 1953 aa19.88■□□□□ 0.77
GTF3A-201ENST00000381140 SDK1Q7Z5N4 2213 aa19.88■□□□□ 0.77
GTF3A-201ENST00000381140 ILVBLA1L0T0 632 aa19.87■□□□□ 0.77
GTF3A-201ENST00000381140 TTC34A8MYJ7 566 aa19.87■□□□□ 0.77
GTF3A-201ENST00000381140 CBX4O00257 560 aa19.87■□□□□ 0.77
GTF3A-201ENST00000381140 SRPRAP08240 638 aaKnown RBP19.87■□□□□ 0.77
GTF3A-201ENST00000381140 RARAP10276 462 aa19.87■□□□□ 0.77
GTF3A-201ENST00000381140 GOT1P17174 413 aa19.87■□□□□ 0.77
GTF3A-201ENST00000381140 NNMTP40261 264 aa19.87■□□□□ 0.77
GTF3A-201ENST00000381140 MAPKAPK2P49137 400 aa19.87■□□□□ 0.77
GTF3A-201ENST00000381140 KRT83P78385 493 aa19.87■□□□□ 0.77
GTF3A-201ENST00000381140 SEMA3BQ13214 749 aa19.87■□□□□ 0.77
GTF3A-201ENST00000381140 HADHQ16836 314 aaKnown RBP19.87■□□□□ 0.77
GTF3A-201ENST00000381140 BOLA3Q53S33 107 aa19.87■□□□□ 0.77
GTF3A-201ENST00000381140 IL31Q6EBC2 164 aa19.87■□□□□ 0.77
GTF3A-201ENST00000381140 CEP68Q76N32 757 aa19.87■□□□□ 0.77
GTF3A-201ENST00000381140 NLRP14Q86W24 1093 aa19.87■□□□□ 0.77
GTF3A-201ENST00000381140 ZNF354CQ86Y25 554 aa19.87■□□□□ 0.77
GTF3A-201ENST00000381140 RTL3Q8N8U3 475 aaKnown RBP19.87■□□□□ 0.77
GTF3A-201ENST00000381140 ATP13A1Q9HD20 1204 aa19.87■□□□□ 0.77
GTF3A-201ENST00000381140 EBF1Q9UH73 591 aa19.87■□□□□ 0.77
GTF3A-201ENST00000381140 ZSCAN12O43309 604 aa19.86■□□□□ 0.77
GTF3A-201ENST00000381140 HRO43593 1189 aa19.86■□□□□ 0.77
GTF3A-201ENST00000381140 CCDC175P0C221 793 aa19.86■□□□□ 0.77
GTF3A-201ENST00000381140 NDUFV2P19404 249 aa19.86■□□□□ 0.77
GTF3A-201ENST00000381140 GLDCP23378 1020 aa19.86■□□□□ 0.77
GTF3A-201ENST00000381140 ACVRL1P37023 503 aa19.86■□□□□ 0.77
GTF3A-201ENST00000381140 NBL1P41271 181 aa19.86■□□□□ 0.77
GTF3A-201ENST00000381140 SLC25A11Q02978 314 aaKnown RBP19.86■□□□□ 0.77
GTF3A-201ENST00000381140 ACCSLQ4AC99 568 aa19.86■□□□□ 0.77
GTF3A-201ENST00000381140 ZFYVE27Q5T4F4 411 aa19.86■□□□□ 0.77
GTF3A-201ENST00000381140 LINGO4Q6UY18 593 aa19.86■□□□□ 0.77
GTF3A-201ENST00000381140 PRR23BQ6ZRT6 265 aa19.86■□□□□ 0.77
GTF3A-201ENST00000381140 RASSF3Q86WH2 238 aa19.86■□□□□ 0.77
GTF3A-201ENST00000381140 PSTKQ8IV42 348 aaKnown RBP19.86■□□□□ 0.77
GTF3A-201ENST00000381140 ABCA7Q8IZY2 2146 aa19.86■□□□□ 0.77
GTF3A-201ENST00000381140 ACRBPQ8NEB7 543 aa19.86■□□□□ 0.77
GTF3A-201ENST00000381140 RLN3Q8WXF3 142 aa19.86■□□□□ 0.77
GTF3A-201ENST00000381140 MYO19Q96H55 970 aa19.86■□□□□ 0.77
GTF3A-201ENST00000381140 C2orf49Q9BVC5 232 aaPredicted RBP19.86■□□□□ 0.77
GTF3A-201ENST00000381140 KLHL11Q9NVR0 708 aa19.86■□□□□ 0.77
GTF3A-201ENST00000381140 SUN2Q9UH99 717 aa19.86■□□□□ 0.77
GTF3A-201ENST00000381140 VPS51Q9UID3 782 aa19.86■□□□□ 0.77
GTF3A-201ENST00000381140 PPP2R2CQ9Y2T4 447 aa19.86■□□□□ 0.77
GTF3A-201ENST00000381140 SHROOM3Q8TF72 1996 aa19.86■□□□□ 0.77
GTF3A-201ENST00000381140 PLXND1Q9Y4D7 1925 aa19.86■□□□□ 0.77
GTF3A-201ENST00000381140 H3BRJ5 948 aa19.85■□□□□ 0.77
GTF3A-201ENST00000381140 FGF10O15520 208 aaPredicted RBP19.85■□□□□ 0.77
GTF3A-201ENST00000381140 RAMP2O60895 175 aa19.85■□□□□ 0.77
GTF3A-201ENST00000381140 LILRB5O75023 590 aa19.85■□□□□ 0.77
GTF3A-201ENST00000381140 RPP40O75818 363 aaKnown RBP19.85■□□□□ 0.77
GTF3A-201ENST00000381140 TAS2R40P59535 323 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms