RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 CAMKK1Q8N5S9 505 aa9.52□□□□□ -0.89
HMGN1-202ENST00000380747 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.52□□□□□ -0.89
HMGN1-202ENST00000380747 OR8K1Q8NGG5 319 aa9.52□□□□□ -0.89
HMGN1-202ENST00000380747 FIBINQ8TAL6 211 aa9.52□□□□□ -0.89
HMGN1-202ENST00000380747 CYB5D2Q8WUJ1 264 aa9.52□□□□□ -0.89
HMGN1-202ENST00000380747 IGSF8Q969P0 613 aa9.52□□□□□ -0.89
HMGN1-202ENST00000380747 TPSD1Q9BZJ3 242 aa9.52□□□□□ -0.89
HMGN1-202ENST00000380747 DEF6Q9H4E7 631 aa9.52□□□□□ -0.89
HMGN1-202ENST00000380747 KIAA1522Q9P206 1035 aaPredicted RBP9.52□□□□□ -0.89
HMGN1-202ENST00000380747 BCCIPQ9P287 314 aaKnown RBP eCLIP9.52□□□□□ -0.89
HMGN1-202ENST00000380747 ARHGAP20Q9P2F6 1191 aa9.52□□□□□ -0.89
HMGN1-202ENST00000380747 RAD54BQ9Y620 910 aa9.52□□□□□ -0.89
HMGN1-202ENST00000380747 STON1Q9Y6Q2 735 aa9.52□□□□□ -0.89
HMGN1-202ENST00000380747 MYOFQ9NZM1 2061 aa9.52□□□□□ -0.89
HMGN1-202ENST00000380747 DMXL2Q8TDJ6 3036 aa9.52□□□□□ -0.89
HMGN1-202ENST00000380747 LAMA5O15230 3695 aa9.52□□□□□ -0.89
HMGN1-202ENST00000380747 PKD1L2Q7Z442 2459 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 A0A087X0T9 212 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 A0A1B0GVM2 712 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 TCAF2A6NFQ2 919 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 WASH3PC4AMC7 463 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 AKR1B15C9JRZ8 316 aaPredicted RBP9.51□□□□□ -0.89
HMGN1-202ENST00000380747 E9PAM4 449 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 I6L893 689 aaPredicted RBP9.51□□□□□ -0.89
HMGN1-202ENST00000380747 TM4SF5O14894 197 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 ZBTB24O43167 697 aaPredicted RBP9.51□□□□□ -0.89
HMGN1-202ENST00000380747 SRGAP2O75044 1071 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 MFAP3LO75121 409 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 CNTN5O94779 1100 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 MOCS3O95396 460 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 FAM228BP0C875 321 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 MYBL1P10243 752 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 PSMA2P25787 234 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 HNRNPH3P31942 346 aaKnown RBP9.51□□□□□ -0.89
HMGN1-202ENST00000380747 SOX11P35716 441 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 IL12RB1P42701 662 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 NUMBP49757 651 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 IRAK1P51617 712 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 HDAC4P56524 1084 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 OGDHQ02218 1023 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 MAMLD1Q13495 774 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 SIM2Q14190 667 aaPredicted RBP9.51□□□□□ -0.89
HMGN1-202ENST00000380747 ZNF234Q14588 700 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 E2F5Q15329 346 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 FUT11Q495W5 492 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 PITRM1Q5JRX3 1037 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 CCDC122Q5T0U0 273 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 TMEM215Q68D42 235 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 RNF43Q68DV7 783 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 KIAA1211LQ6NV74 962 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 SERPINA13PQ6UXR4 307 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 PRR23BQ6ZRT6 265 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 CEP68Q76N32 757 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 ADIPOR2Q86V24 386 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 DRC7Q8IY82 874 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 CCDC185Q8N715 623 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 HMGB4Q8WW32 186 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 CENPIQ92674 756 aaPredicted RBP9.51□□□□□ -0.89
HMGN1-202ENST00000380747 C1orf74Q96LT6 269 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 HAPLN3Q96S86 360 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 DNAJC7Q99615 494 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 CNPY3Q9BT09 278 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 ISCUQ9H1K1 167 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 ABHD10Q9NUJ1 306 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 THAP10Q9P2Z0 257 aaPredicted RBP9.51□□□□□ -0.89
HMGN1-202ENST00000380747 PLA2G4CQ9UP65 541 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 SCINQ9Y6U3 715 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 NBEAQ8NFP9 2946 aa9.51□□□□□ -0.89
HMGN1-202ENST00000380747 SMG1Q96Q15 3661 aaKnown RBP9.5□□□□□ -0.89
HMGN1-202ENST00000380747 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.5□□□□□ -0.89
HMGN1-202ENST00000380747 A0A1W2PQF6 199 aa9.5□□□□□ -0.89
HMGN1-202ENST00000380747 TMEM191CA6NGB0 347 aa9.5□□□□□ -0.89
HMGN1-202ENST00000380747 NPC1O15118 1278 aa9.5□□□□□ -0.89
HMGN1-202ENST00000380747 SYNCRIPO60506 623 aaKnown RBP9.5□□□□□ -0.89
HMGN1-202ENST00000380747 CLDN11O75508 207 aa9.5□□□□□ -0.89
HMGN1-202ENST00000380747 RPP40O75818 363 aaKnown RBP9.5□□□□□ -0.89
HMGN1-202ENST00000380747 ATP5BP06576 529 aaKnown RBP9.5□□□□□ -0.89
HMGN1-202ENST00000380747 RHOCP08134 193 aa9.5□□□□□ -0.89
HMGN1-202ENST00000380747 PRKCHP24723 683 aa9.5□□□□□ -0.89
HMGN1-202ENST00000380747 ADRA1BP35368 520 aa9.5□□□□□ -0.89
HMGN1-202ENST00000380747 CSKP41240 450 aa9.5□□□□□ -0.89
HMGN1-202ENST00000380747 ZNF75DP51815 510 aa9.5□□□□□ -0.89
HMGN1-202ENST00000380747 CDH4P55283 916 aa9.5□□□□□ -0.89
HMGN1-202ENST00000380747 OXCT1P55809 520 aa9.5□□□□□ -0.89
HMGN1-202ENST00000380747 ST8SIA6P61647 398 aa9.5□□□□□ -0.89
HMGN1-202ENST00000380747 GFPT1Q06210 699 aaPredicted RBP9.5□□□□□ -0.89
HMGN1-202ENST00000380747 ZNF177Q13360 481 aaPredicted RBP9.5□□□□□ -0.89
HMGN1-202ENST00000380747 STARD3Q14849 445 aa9.5□□□□□ -0.89
HMGN1-202ENST00000380747 LPAL2Q16609 132 aa9.5□□□□□ -0.89
HMGN1-202ENST00000380747 ALFQ53S48 1182 aa9.5□□□□□ -0.89
HMGN1-202ENST00000380747 EFHC2Q5JST6 749 aa9.5□□□□□ -0.89
HMGN1-202ENST00000380747 ACBD5Q5T8D3 534 aaPredicted RBP9.5□□□□□ -0.89
HMGN1-202ENST00000380747 ALKBH5Q6P6C2 394 aaKnown RBP9.5□□□□□ -0.89
HMGN1-202ENST00000380747 TFAP2DQ7Z6R9 452 aa9.5□□□□□ -0.89
HMGN1-202ENST00000380747 KIAA0907Q7Z7F0 614 aaPredicted RBP9.5□□□□□ -0.89
HMGN1-202ENST00000380747 SLFN11Q7Z7L1 901 aa9.5□□□□□ -0.89
HMGN1-202ENST00000380747 APCDD1Q8J025 514 aa9.5□□□□□ -0.89
HMGN1-202ENST00000380747 MDGA1Q8NFP4 955 aa9.5□□□□□ -0.89
HMGN1-202ENST00000380747 TTC17Q96AE7 1141 aa9.5□□□□□ -0.89
HMGN1-202ENST00000380747 LMLNQ96KR4 655 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms