RNA–Protein interactions for RNA: ENST00000379538.7

SNCAIP-203, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 2,588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-203ENST00000379538 C1QTNF12Q5T7M4 302 aa14.18□□□□□ -0.14
SNCAIP-203ENST00000379538 MBLAC2Q68D91 279 aa14.18□□□□□ -0.14
SNCAIP-203ENST00000379538 KLC3Q6P597 504 aa14.18□□□□□ -0.14
SNCAIP-203ENST00000379538 USP37Q86T82 979 aa14.18□□□□□ -0.14
SNCAIP-203ENST00000379538 ZBTB46Q86UZ6 589 aa14.18□□□□□ -0.14
SNCAIP-203ENST00000379538 ZNF410Q86VK4 478 aa14.18□□□□□ -0.14
SNCAIP-203ENST00000379538 HACE1Q8IYU2 909 aa14.18□□□□□ -0.14
SNCAIP-203ENST00000379538 TNS4Q8IZW8 715 aa14.18□□□□□ -0.14
SNCAIP-203ENST00000379538 SORT1Q99523 831 aa14.18□□□□□ -0.14
SNCAIP-203ENST00000379538 SAGE1Q9NXZ1 904 aa14.18□□□□□ -0.14
SNCAIP-203ENST00000379538 GRAP2O75791 330 aa14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 RECQL4O94761 1208 aa14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 HOXD10P28358 340 aa14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 MIPP30301 263 aa14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 L1CAMP32004 1257 aa14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 PSMD7P51665 324 aa14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 ATN1P54259 1190 aaPredicted RBP14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 TRPC3Q13507 836 aa14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 CYLC2Q14093 348 aaPredicted RBP14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 CDO1Q16878 200 aa14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 FAM187BQ17R55 369 aa14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 IFNLR1Q8IU57 520 aaPredicted RBP14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 TRIM42Q8IWZ5 723 aa14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 MARVELD2Q8N4S9 558 aa14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 MAPK15Q8TD08 544 aa14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 ERLEC1Q96DZ1 483 aa14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 KIF12Q96FN5 646 aa14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 DEFB118Q96PH6 123 aa14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 PEBP4Q96S96 227 aa14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 XYLT2Q9H1B5 865 aa14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 DDX56Q9NY93 547 aaKnown RBP14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 ST3GAL5Q9UNP4 418 aa14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 NOD1Q9Y239 953 aa14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 CCDC166P0CW27 439 aa14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 CD19P15391 556 aa14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 XRCC1P18887 633 aaPredicted RBP14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 VARSP26640 1264 aaKnown RBP14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 RBL1P28749 1068 aa14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 HOXC8P31273 242 aa14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 CD52P31358 61 aa14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 MS4A2Q01362 244 aa14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 ROR1Q01973 937 aa14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 ITGA9Q13797 1035 aa14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 WDR49Q8IV35 697 aa14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 ATXN7L3BQ96GX2 97 aa14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 LENG8Q96PV6 779 aaPredicted RBP14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 LPIN3Q9BQK8 851 aa14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 ADPGKQ9BRR6 497 aa14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 MAGEB5Q9BZ81 275 aa14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 UPF3AQ9H1J1 476 aaKnown RBP14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 SEMA6AQ9H2E6 1030 aa14.17□□□□□ -0.14
SNCAIP-203ENST00000379538 CALB1P05937 261 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 CDH2P19022 906 aaPredicted RBP14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 CCR3P51677 355 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 THOP1P52888 689 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 PGGT1BP53609 377 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 CBX3Q13185 183 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 DCTN2Q13561 401 aaKnown RBP14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 SLC9B1Q4ZJI4 515 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 ZSCAN18Q8TBC5 510 aaPredicted RBP14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 KCNN1Q92952 543 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 SDCBP2Q9H190 292 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 EPB41L1Q9H4G0 881 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 HMX1Q9NP08 348 aaPredicted RBP14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 PSAT1Q9Y617 370 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 CEPT1Q9Y6K0 416 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 XIRP2A4UGR9 3374 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 SCN1AP35498 2009 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 APOC4-APOC2K7ER74 178 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 NEMP1O14524 444 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 CASQ2O14958 399 aaPredicted RBP14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 AP1G1O43747 822 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 ASS1P00966 412 aaKnown RBP14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 APOEP02649 317 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 APOC2P02655 101 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 ALDOAP04075 364 aaKnown RBP14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 PDGFRBP09619 1106 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 MCF2P10911 925 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 COX4I1P13073 169 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 PTPN1P18031 435 aaKnown RBP14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 ABCD1P33897 745 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 ABCG1P45844 678 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 NUDT2P50583 147 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 HDAC4P56524 1084 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 PSMC1P62191 440 aaKnown RBP14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 MRPS6P82932 125 aaKnown RBP14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 POU5F1BQ06416 359 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 KRT81Q14533 505 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 ZNF699Q32M78 642 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 KCTD21Q4G0X4 260 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 SH2D4BQ5SQS7 431 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 UBXN11Q5T124 520 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 SLC27A1Q6PCB7 646 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 CPXM1Q96SM3 734 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 CDRT15Q96T59 188 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 PKP2Q99959 881 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 CISHQ9NSE2 258 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 CHD7Q9P2D1 2997 aa14.16□□□□□ -0.14
SNCAIP-203ENST00000379538 DOLKQ9UPQ8 538 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms