RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 ARTNQ5T4W7 220 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 TSTD2Q5T7W7 516 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 NKIRAS1Q9NYS0 192 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 CPSF2Q9P2I0 782 aaKnown RBP7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 PRRC2BQ5JSZ5 2229 aaKnown RBP7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 CRTAMO95727 393 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 ABHD2P08910 425 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 KDELR1P24390 212 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 RCVRNP35243 200 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 IFITM3Q01628 133 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 CUL2Q13617 745 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 EEF1DP3Q658K8 133 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 SWSAP1Q6NVH7 229 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 PRR23BQ6ZRT6 265 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 ZBTB33Q86T24 672 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 NPAS4Q8IUM7 802 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 CMTR2Q8IYT2 770 aaKnown RBP7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 EXD1Q8NHP7 514 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 SYNCQ9H7C4 482 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 KIAA1522Q9P206 1035 aaPredicted RBP7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 GABBR1Q9UBS5 961 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 THRAP10827 490 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 NEFHP12036 1026 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 ZNF26P17031 533 aaPredicted RBP7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 TFDP3Q5H9I0 405 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 OGFOD2Q6N063 350 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 VPS36Q86VN1 386 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 IFNLR1Q8IU57 520 aaPredicted RBP7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 SLC26A7Q8TE54 656 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 DEPDC1BQ8WUY9 529 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 NACC1Q96RE7 527 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 LGMNQ99538 433 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 SLC38A7Q9NVC3 462 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 CNTN6Q9UQ52 1028 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 NEMP2A6NFY4 417 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 HNRNPDLO14979 420 aaKnown RBP7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 CCDC22O60826 627 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 MAGEA3P43357 314 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 YAP1P46937 504 aaKnown RBP7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 HSDL1Q3SXM5 330 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 C12orf56Q8IXR9 622 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 GPR65Q8IYL9 337 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 GBP7Q8N8V2 638 aaPredicted RBP7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 OR9I1Q8NGQ6 314 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 COPS5Q92905 334 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 PLEKHG4BQ96PX9 1271 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 DUS2Q9NX74 493 aaKnown RBP7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 RASAL2Q9UJF2 1139 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 MAGED1Q9Y5V3 778 aaPredicted RBP7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 H0Y858 1186 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 MT-CO1P00395 513 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 CKMT2P17540 419 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 CHRM3P20309 590 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 TGFBR1P36897 503 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 UBE3AQ05086 875 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 DOC2BQ14184 412 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 XKR9Q5GH70 373 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 ZNF365Q70YC5 407 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 DEFB107AQ8IZN7 70 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 TMEM174Q8WUU8 243 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 CSF3RQ99062 836 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 NAP1L3Q99457 506 aaPredicted RBP7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 PRPF18Q99633 342 aaKnown RBP7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 SLC2A11Q9BYW1 496 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 LUC7LQ9NQ29 371 aaKnown RBP7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 TLR9Q9NR96 1032 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 GTSE1Q9NYZ3 720 aa7.53□□□□□ -1.2
GPCPD1-201ENST00000379019 TK2O00142 265 aa7.52□□□□□ -1.2
GPCPD1-201ENST00000379019 ATE1O95260 518 aa7.52□□□□□ -1.2
GPCPD1-201ENST00000379019 ESRRAP11474 423 aaPredicted RBP7.52□□□□□ -1.2
GPCPD1-201ENST00000379019 CDH2P19022 906 aaPredicted RBP7.52□□□□□ -1.2
GPCPD1-201ENST00000379019 MXD4Q14582 209 aaPredicted RBP7.52□□□□□ -1.2
GPCPD1-201ENST00000379019 PDK3Q15120 406 aa7.52□□□□□ -1.2
GPCPD1-201ENST00000379019 ARHGAP17Q68EM7 881 aa7.52□□□□□ -1.2
GPCPD1-201ENST00000379019 RHOT1Q8IXI2 618 aa7.52□□□□□ -1.2
GPCPD1-201ENST00000379019 LSMEM2Q8N112 164 aa7.52□□□□□ -1.2
GPCPD1-201ENST00000379019 LINC01465Q8N7H1 131 aa7.52□□□□□ -1.2
GPCPD1-201ENST00000379019 TMEM102Q8N9M5 508 aaPredicted RBP7.52□□□□□ -1.2
GPCPD1-201ENST00000379019 PYROXD1Q8WU10 500 aa7.52□□□□□ -1.2
GPCPD1-201ENST00000379019 ELOVL4Q9GZR5 314 aa7.52□□□□□ -1.2
GPCPD1-201ENST00000379019 TRPV6Q9H1D0 765 aa7.52□□□□□ -1.2
GPCPD1-201ENST00000379019 CISHQ9NSE2 258 aa7.52□□□□□ -1.2
GPCPD1-201ENST00000379019 OLAHQ9NV23 265 aa7.52□□□□□ -1.2
GPCPD1-201ENST00000379019 MT-ND1P03886 318 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 ITGAVP06756 1048 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 CYP2C9P11712 490 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 PMLP29590 882 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 HPCAP84074 193 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 RALGDSQ12967 914 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 FBXO48Q5FWF7 155 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 SPDYAQ5MJ70 313 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 NANOGP8Q6NSW7 305 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 MARK2Q7KZI7 788 aaKnown RBP7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 XYLT1Q86Y38 959 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 EPHX4Q8IUS5 362 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 ITFG2Q969R8 447 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 ATP6V1E2Q96A05 226 aa7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 LENG1Q96BZ8 264 aaPredicted RBP7.52□□□□□ -1.21
GPCPD1-201ENST00000379019 RUNDC3BQ96NL0 473 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms