RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 CPP00450 1065 aa17.75■□□□□ 0.43
THUMPD2-201ENST00000378727 SLC6A4P31645 630 aa17.75■□□□□ 0.43
THUMPD2-201ENST00000378727 NDST2P52849 883 aa17.75■□□□□ 0.43
THUMPD2-201ENST00000378727 EPHB3P54753 998 aa17.75■□□□□ 0.43
THUMPD2-201ENST00000378727 CREMQ03060 361 aa17.75■□□□□ 0.43
THUMPD2-201ENST00000378727 KLHL38Q2WGJ6 581 aa17.75■□□□□ 0.43
THUMPD2-201ENST00000378727 FAM133BQ5BKY9 247 aaKnown RBP17.75■□□□□ 0.43
THUMPD2-201ENST00000378727 ACBD5Q5T8D3 534 aaPredicted RBP17.75■□□□□ 0.43
THUMPD2-201ENST00000378727 UNC5AQ6ZN44 842 aa17.75■□□□□ 0.43
THUMPD2-201ENST00000378727 TAOK1Q7L7X3 1001 aa17.75■□□□□ 0.43
THUMPD2-201ENST00000378727 OTOP3Q7RTS5 596 aa17.75■□□□□ 0.43
THUMPD2-201ENST00000378727 PRPF39Q86UA1 669 aaKnown RBP17.75■□□□□ 0.43
THUMPD2-201ENST00000378727 PAFAH2Q99487 392 aa17.75■□□□□ 0.43
THUMPD2-201ENST00000378727 SELENOSQ9BQE4 189 aa17.75■□□□□ 0.43
THUMPD2-201ENST00000378727 CNOT10Q9H9A5 744 aaKnown RBP17.75■□□□□ 0.43
THUMPD2-201ENST00000378727 STK39Q9UEW8 545 aa17.75■□□□□ 0.43
THUMPD2-201ENST00000378727 MAD1L1Q9Y6D9 718 aa17.75■□□□□ 0.43
THUMPD2-201ENST00000378727 CACNG3O60359 315 aa17.74■□□□□ 0.43
THUMPD2-201ENST00000378727 ACSL4O60488 711 aa17.74■□□□□ 0.43
THUMPD2-201ENST00000378727 KLKB1P03952 638 aa17.74■□□□□ 0.43
THUMPD2-201ENST00000378727 CA8P35219 290 aa17.74■□□□□ 0.43
THUMPD2-201ENST00000378727 CRADDP78560 199 aa17.74■□□□□ 0.43
THUMPD2-201ENST00000378727 MTA1Q13330 715 aa17.74■□□□□ 0.43
THUMPD2-201ENST00000378727 KBTBD12Q3ZCT8 623 aa17.74■□□□□ 0.43
THUMPD2-201ENST00000378727 PSRC1Q6PGN9 363 aaPredicted RBP17.74■□□□□ 0.43
THUMPD2-201ENST00000378727 LRRC49Q8IUZ0 686 aa17.74■□□□□ 0.43
THUMPD2-201ENST00000378727 HMCESQ96FZ2 354 aa17.74■□□□□ 0.43
THUMPD2-201ENST00000378727 CYTH2Q99418 400 aa17.74■□□□□ 0.43
THUMPD2-201ENST00000378727 RAD9AQ99638 391 aa17.74■□□□□ 0.43
THUMPD2-201ENST00000378727 GKN1Q9NS71 199 aa17.74■□□□□ 0.43
THUMPD2-201ENST00000378727 PSMC3IPQ9P2W1 217 aaPredicted RBP17.74■□□□□ 0.43
THUMPD2-201ENST00000378727 IPO11Q9UI26 975 aaKnown RBP17.74■□□□□ 0.43
THUMPD2-201ENST00000378727 A6NNZ2 444 aa17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 USP12O75317 370 aa17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 STC2O76061 302 aa17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 PEX11BO96011 259 aa17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 SYN1P17600 705 aa17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 LSP1P33241 339 aa17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 TUBB8Q3ZCM7 444 aa17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 C5orf22Q49AR2 442 aa17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 RFWD3Q6PCD5 774 aa17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 ADGRD1Q6QNK2 874 aa17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 LGI2Q8N0V4 545 aa17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 DCAKDQ8WVC6 231 aa17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 ARNTL2Q8WYA1 636 aa17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 HERVK_113Q902F9 699 aa17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 WBP2Q969T9 261 aa17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 OXNAD1Q96HP4 312 aaPredicted RBP17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 IL21Q9HBE4 155 aa17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 SDR42E2A6NKP2 422 aa17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 RASA4BC9J798 803 aa17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 RASA4O43374 803 aa17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 CXCL14O95715 111 aa17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 F11P03951 625 aa17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 CHN1P15882 459 aa17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 MGAT1P26572 445 aa17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 PPP3CCP48454 512 aa17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 HARS2P49590 506 aaKnown RBP17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 SESN2P58004 480 aaPredicted RBP17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 TIGD7Q6NT04 549 aaPredicted RBP17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 LILRA6Q6PI73 481 aa17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 TRABD2AQ86V40 505 aa17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 DENND1CQ8IV53 801 aa17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 KLHDC8BQ8IXV7 354 aa17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 SRRM1Q8IYB3 904 aaKnown RBP17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 OR52K1Q8NGK4 314 aa17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 PLD4Q96BZ4 506 aa17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 STAMBPL1Q96FJ0 436 aa17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 KLF16Q9BXK1 252 aaPredicted RBP17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 UXTQ9UBK9 157 aaPredicted RBP17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 SSX2IPQ9Y2D8 614 aa17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 SLC4A7Q9Y6M7 1214 aa17.73■□□□□ 0.43
THUMPD2-201ENST00000378727 ERI2A8K979 691 aaKnown RBP17.72■□□□□ 0.43
THUMPD2-201ENST00000378727 F5H5T6 163 aa17.72■□□□□ 0.43
THUMPD2-201ENST00000378727 GSTA2P09210 222 aa17.72■□□□□ 0.43
THUMPD2-201ENST00000378727 PRKCHP24723 683 aa17.72■□□□□ 0.43
THUMPD2-201ENST00000378727 STX2P32856 288 aa17.72■□□□□ 0.43
THUMPD2-201ENST00000378727 ERVFC1P60507 584 aa17.72■□□□□ 0.43
THUMPD2-201ENST00000378727 TMC7Q7Z402 723 aa17.72■□□□□ 0.43
THUMPD2-201ENST00000378727 CFAP52Q8N1V2 620 aa17.72■□□□□ 0.43
THUMPD2-201ENST00000378727 SLC22A12Q96S37 553 aa17.72■□□□□ 0.43
THUMPD2-201ENST00000378727 ALG13Q9NP73 1137 aaKnown RBP17.72■□□□□ 0.43
THUMPD2-201ENST00000378727 CASS4Q9NQ75 786 aa17.72■□□□□ 0.43
THUMPD2-201ENST00000378727 SYBUQ9NX95 663 aa17.72■□□□□ 0.43
THUMPD2-201ENST00000378727 DONSONQ9NYP3 566 aa17.72■□□□□ 0.43
THUMPD2-201ENST00000378727 UBP1Q9NZI7 540 aa17.72■□□□□ 0.43
THUMPD2-201ENST00000378727 CHD5Q8TDI0 1954 aa17.72■□□□□ 0.43
THUMPD2-201ENST00000378727 J3KR12 359 aa17.71■□□□□ 0.43
THUMPD2-201ENST00000378727 TLL1O43897 1013 aa17.71■□□□□ 0.43
THUMPD2-201ENST00000378727 HLA-DQB2P05538 268 aa17.71■□□□□ 0.43
THUMPD2-201ENST00000378727 SLC11A2P49281 568 aa17.71■□□□□ 0.43
THUMPD2-201ENST00000378727 STEAP4Q687X5 459 aa17.71■□□□□ 0.43
THUMPD2-201ENST00000378727 TRMT10BQ6PF06 316 aaKnown RBP17.71■□□□□ 0.43
THUMPD2-201ENST00000378727 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.71■□□□□ 0.43
THUMPD2-201ENST00000378727 GSDMBQ8TAX9 411 aa17.71■□□□□ 0.43
THUMPD2-201ENST00000378727 KLHL5Q96PQ7 755 aa17.71■□□□□ 0.43
THUMPD2-201ENST00000378727 GLOD4Q9HC38 313 aa17.71■□□□□ 0.43
THUMPD2-201ENST00000378727 SMYD2Q9NRG4 433 aa17.71■□□□□ 0.43
THUMPD2-201ENST00000378727 PCDHA11Q9Y5I1 949 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms