RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 TM6SF2Q9BZW4 377 aa13.44□□□□□ -0.26
NPHP4-203ENST00000378169 GIT1Q9Y2X7 761 aa13.44□□□□□ -0.26
NPHP4-203ENST00000378169 NR5A2O00482 541 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 STK25O00506 426 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 PPEF2O14830 753 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 RGS20O76081 388 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 BAIAP3O94812 1187 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 MPOP05164 745 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 ITGA2BP08514 1039 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 ITGALP20701 1170 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 RPL9P32969 192 aaKnown RBP13.43□□□□□ -0.26
NPHP4-203ENST00000378169 GPD2P43304 727 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 SERPINH1P50454 418 aaKnown RBP13.43□□□□□ -0.26
NPHP4-203ENST00000378169 SLC1A5Q15758 541 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 RETSATQ6NUM9 610 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 BNC2Q6ZN30 1099 aaPredicted RBP13.43□□□□□ -0.26
NPHP4-203ENST00000378169 SLC26A9Q7LBE3 791 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 TMPRSS6Q8IU80 811 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 APBB2Q92870 758 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 SEMA3CQ99985 751 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 TMEM39AQ9NV64 488 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 GID8Q9NWU2 228 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 SOX13Q9UN79 622 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 EFR3BQ9Y2G0 817 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 PTCH2Q9Y6C5 1203 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 UBDO15205 165 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 TPBGLP0DKB5 382 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 TUFMP49411 452 aaKnown RBP13.43□□□□□ -0.26
NPHP4-203ENST00000378169 TBL3Q12788 808 aaKnown RBP13.43□□□□□ -0.26
NPHP4-203ENST00000378169 PTK2BQ14289 1009 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 ZDHHC24Q6UX98 284 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 OTOAQ7RTW8 1153 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 BTBD10Q9BSF8 475 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 POLR1EQ9GZS1 481 aaKnown RBP13.43□□□□□ -0.26
NPHP4-203ENST00000378169 CAB39LQ9H9S4 337 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 CCDC167Q9P0B6 97 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 UBA2Q9UBT2 640 aaPredicted RBP13.43□□□□□ -0.26
NPHP4-203ENST00000378169 PNMA8BQ9ULN7 279 aaPredicted RBP13.43□□□□□ -0.26
NPHP4-203ENST00000378169 SDK1Q7Z5N4 2213 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 ENO4A6NNW6 628 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 PFDN1O60925 122 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 RTN3O95197 1032 aaPredicted RBP13.43□□□□□ -0.26
NPHP4-203ENST00000378169 TSPAN8P19075 237 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 IL1R2P27930 398 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 AARS2Q5JTZ9 985 aaKnown RBP13.43□□□□□ -0.26
NPHP4-203ENST00000378169 AP1ARQ63HQ0 302 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 GLT6D1Q7Z4J2 308 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 STARD13Q9Y3M8 1113 aa13.43□□□□□ -0.26
NPHP4-203ENST00000378169 KATNA1O75449 491 aa13.42□□□□□ -0.26
NPHP4-203ENST00000378169 DAB1O75553 588 aa13.42□□□□□ -0.26
NPHP4-203ENST00000378169 ZMPSTE24O75844 475 aa13.42□□□□□ -0.26
NPHP4-203ENST00000378169 FSBPO95073 299 aa13.42□□□□□ -0.26
NPHP4-203ENST00000378169 FKBP9O95302 570 aa13.42□□□□□ -0.26
NPHP4-203ENST00000378169 KPNA1P52294 538 aaPredicted RBP13.42□□□□□ -0.26
NPHP4-203ENST00000378169 CA9Q16790 459 aa13.42□□□□□ -0.26
NPHP4-203ENST00000378169 FKBP9P1Q75LS8 142 aa13.42□□□□□ -0.26
NPHP4-203ENST00000378169 SLC41A1Q8IVJ1 513 aa13.42□□□□□ -0.26
NPHP4-203ENST00000378169 PCED1BQ96HM7 432 aa13.42□□□□□ -0.26
NPHP4-203ENST00000378169 ECSITQ9BQ95 431 aa13.42□□□□□ -0.26
NPHP4-203ENST00000378169 SNX13Q9Y5W8 968 aa13.42□□□□□ -0.26
NPHP4-203ENST00000378169 KAT6AQ92794 2004 aa13.42□□□□□ -0.26
NPHP4-203ENST00000378169 LRRC74AQ0VAA2 488 aa13.42□□□□□ -0.26
NPHP4-203ENST00000378169 PSMD5Q16401 504 aa13.42□□□□□ -0.26
NPHP4-203ENST00000378169 PCID2Q5JVF3 399 aa13.42□□□□□ -0.26
NPHP4-203ENST00000378169 RNASEH2BQ5TBB1 312 aaKnown RBP13.42□□□□□ -0.26
NPHP4-203ENST00000378169 SNX32Q86XE0 403 aa13.42□□□□□ -0.26
NPHP4-203ENST00000378169 CYGBQ8WWM9 190 aa13.42□□□□□ -0.26
NPHP4-203ENST00000378169 ADNPQ9H2P0 1102 aa13.42□□□□□ -0.26
NPHP4-203ENST00000378169 ACSS2Q9NR19 701 aa13.42□□□□□ -0.26
NPHP4-203ENST00000378169 SNX10Q9Y5X0 201 aa13.42□□□□□ -0.26
NPHP4-203ENST00000378169 PMM2O15305 246 aa13.42□□□□□ -0.26
NPHP4-203ENST00000378169 TLR5O60602 858 aa13.42□□□□□ -0.26
NPHP4-203ENST00000378169 PAGE1O75459 146 aa13.42□□□□□ -0.26
NPHP4-203ENST00000378169 FMO4P31512 558 aa13.42□□□□□ -0.26
NPHP4-203ENST00000378169 PTP4A2Q12974 167 aa13.42□□□□□ -0.26
NPHP4-203ENST00000378169 DUSP4Q13115 394 aa13.42□□□□□ -0.26
NPHP4-203ENST00000378169 KCNA10Q16322 511 aa13.42□□□□□ -0.26
NPHP4-203ENST00000378169 UGT3A1Q6NUS8 523 aa13.42□□□□□ -0.26
NPHP4-203ENST00000378169 PCDH19Q8TAB3 1148 aa13.42□□□□□ -0.26
NPHP4-203ENST00000378169 ABTB1Q969K4 478 aaPredicted RBP13.42□□□□□ -0.26
NPHP4-203ENST00000378169 ERLEC1Q96DZ1 483 aa13.42□□□□□ -0.26
NPHP4-203ENST00000378169 BORCS6Q96GS4 357 aa13.42□□□□□ -0.26
NPHP4-203ENST00000378169 DERAQ9Y315 318 aa13.42□□□□□ -0.26
NPHP4-203ENST00000378169 PCDHA11Q9Y5I1 949 aa13.42□□□□□ -0.26
NPHP4-203ENST00000378169 LYPLA1O75608 230 aaPredicted RBP13.41□□□□□ -0.26
NPHP4-203ENST00000378169 UNC5CO95185 931 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 CCDC166P0CW27 439 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 SP100P23497 879 aaPredicted RBP13.41□□□□□ -0.26
NPHP4-203ENST00000378169 GRIK3Q13003 919 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 GTF2H3Q13889 308 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 CACUL1Q86Y37 369 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 CFAP52Q8N1V2 620 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 GLIS1Q8NBF1 620 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 LMO3Q8TAP4 145 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 KCTD4Q8WVF5 259 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 SNX27Q96L92 541 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 KCTD15Q96SI1 283 aaPredicted RBP13.41□□□□□ -0.26
NPHP4-203ENST00000378169 TBC1D10AQ9BXI6 508 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 MID1IP1Q9NPA3 183 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 TAS2R13Q9NYV9 303 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms