RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 DCLK1O15075 740 aa16.6■□□□□ 0.25
TRIM27-202ENST00000377199 ACTR3P61158 418 aa16.6■□□□□ 0.25
TRIM27-202ENST00000377199 MRPS35P82673 323 aaKnown RBP16.6■□□□□ 0.25
TRIM27-202ENST00000377199 DPYSQ14117 519 aa16.6■□□□□ 0.25
TRIM27-202ENST00000377199 TRMT5Q32P41 509 aaKnown RBP16.6■□□□□ 0.25
TRIM27-202ENST00000377199 EP400NLQ6ZTU2 488 aa16.6■□□□□ 0.25
TRIM27-202ENST00000377199 NET1Q7Z628 596 aaPredicted RBP16.6■□□□□ 0.25
TRIM27-202ENST00000377199 KCNMB4Q86W47 210 aa16.6■□□□□ 0.25
TRIM27-202ENST00000377199 MARK4Q96L34 752 aa16.6■□□□□ 0.25
TRIM27-202ENST00000377199 ATXN3LQ9H3M9 355 aa16.6■□□□□ 0.25
TRIM27-202ENST00000377199 TASP1Q9H6P5 420 aa16.6■□□□□ 0.25
TRIM27-202ENST00000377199 RBM47A0AV96 593 aaKnown RBP16.59■□□□□ 0.25
TRIM27-202ENST00000377199 NMBRP28336 390 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 SPRP35270 261 aaPredicted RBP16.59■□□□□ 0.25
TRIM27-202ENST00000377199 CLCNKBP51801 687 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 ANKRD20A4Q4UJ75 823 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 LPCAT4Q643R3 524 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 OLFML2BQ68BL8 750 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 FRMD7Q6ZUT3 714 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 PNPLA1Q8N8W4 532 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 RAB3IL1Q8TBN0 382 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 MAPK15Q8TD08 544 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 ACMSDQ8TDX5 336 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 SENP8Q96LD8 212 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 ANKRD27Q96NW4 1050 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 RBBP8Q99708 897 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 CPNE1Q99829 537 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 FIS1Q9Y3D6 152 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 TRIP12Q14669 1992 aaPredicted RBP16.59■□□□□ 0.25
TRIM27-202ENST00000377199 STRNO43815 780 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 SMIM24O75264 130 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 MT-CYBP00156 380 aaPredicted RBP16.59■□□□□ 0.25
TRIM27-202ENST00000377199 C2P06681 752 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 CD68P34810 354 aaPredicted RBP16.59■□□□□ 0.25
TRIM27-202ENST00000377199 CPOXP36551 454 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 POU6F1Q14863 301 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 RABGAP1LQ5R372 815 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 ARHGAP36Q6ZRI8 547 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 SMOQ99835 787 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 FAM124BQ9H5Z6 455 aaPredicted RBP16.59■□□□□ 0.25
TRIM27-202ENST00000377199 WDCPQ9H6R7 721 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 ZNF212Q9UDV6 495 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 OR12D3Q9UGF7 316 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 PLXNA1Q9UIW2 1896 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 A6NHS1 94 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.59■□□□□ 0.25
TRIM27-202ENST00000377199 AIM2O14862 343 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 YBX3P16989 372 aaKnown RBP eCLIP16.59■□□□□ 0.257e-12■■□□□ 12.5
TRIM27-202ENST00000377199 AOC1P19801 751 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 MPP3Q13368 585 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 NXNQ6DKJ4 435 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 RNF148Q8N7C7 305 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 URGCPQ8TCY9 931 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 SGF29Q96ES7 293 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 OR52B2Q96RD2 323 aa16.59■□□□□ 0.25
TRIM27-202ENST00000377199 MLPHQ9BV36 600 aaPredicted RBP16.59■□□□□ 0.25
TRIM27-202ENST00000377199 ZBTB14O43829 449 aa16.58■□□□□ 0.24
TRIM27-202ENST00000377199 TOMM70O94826 608 aa16.58■□□□□ 0.24
TRIM27-202ENST00000377199 AP2A1O95782 977 aa16.58■□□□□ 0.24
TRIM27-202ENST00000377199 SP100P23497 879 aaPredicted RBP16.58■□□□□ 0.24
TRIM27-202ENST00000377199 MPSTP25325 297 aa16.58■□□□□ 0.24
TRIM27-202ENST00000377199 EPHA3P29320 983 aa16.58■□□□□ 0.24
TRIM27-202ENST00000377199 SERPINB8P50452 374 aa16.58■□□□□ 0.24
TRIM27-202ENST00000377199 ASPHQ12797 758 aa16.58■□□□□ 0.24
TRIM27-202ENST00000377199 CCL14Q16627 93 aa16.58■□□□□ 0.24
TRIM27-202ENST00000377199 SPANXN3Q5MJ09 141 aa16.58■□□□□ 0.24
TRIM27-202ENST00000377199 GRTP1Q5TC63 336 aa16.58■□□□□ 0.24
TRIM27-202ENST00000377199 PHC3Q8NDX5 983 aa16.58■□□□□ 0.24
TRIM27-202ENST00000377199 FAM136AQ96C01 138 aa16.58■□□□□ 0.24
TRIM27-202ENST00000377199 TSPYL2Q9H2G4 693 aaPredicted RBP16.58■□□□□ 0.24
TRIM27-202ENST00000377199 PIDD1Q9HB75 910 aa16.58■□□□□ 0.24
TRIM27-202ENST00000377199 WDR6Q9NNW5 1121 aaKnown RBP16.58■□□□□ 0.24
TRIM27-202ENST00000377199 SCOCQ9UIL1 159 aa16.58■□□□□ 0.24
TRIM27-202ENST00000377199 SHROOM3Q8TF72 1996 aa16.58■□□□□ 0.24
TRIM27-202ENST00000377199 ZCWPW2A0A1B0GU75 182 aa16.58■□□□□ 0.24
TRIM27-202ENST00000377199 SMIM35A0A1B0GVV1 85 aa16.58■□□□□ 0.24
TRIM27-202ENST00000377199 EME2A4GXA9 379 aaPredicted RBP16.58■□□□□ 0.24
TRIM27-202ENST00000377199 F2P00734 622 aa16.58■□□□□ 0.24
TRIM27-202ENST00000377199 PAFAH1B3Q15102 231 aaKnown RBP16.58■□□□□ 0.24
TRIM27-202ENST00000377199 PPM1LQ5SGD2 360 aa16.58■□□□□ 0.24
TRIM27-202ENST00000377199 PLEKHH3Q7Z736 793 aa16.58■□□□□ 0.24
TRIM27-202ENST00000377199 FAM35AQ86V20 835 aa16.58■□□□□ 0.24
TRIM27-202ENST00000377199 TDRD5Q8NAT2 981 aaKnown RBP16.58■□□□□ 0.24
TRIM27-202ENST00000377199 NAT9Q9BTE0 207 aa16.58■□□□□ 0.24
TRIM27-202ENST00000377199 NMRAL1Q9HBL8 299 aa16.58■□□□□ 0.24
TRIM27-202ENST00000377199 EIF2B3Q9NR50 452 aaKnown RBP16.58■□□□□ 0.24
TRIM27-202ENST00000377199 RCOR3Q9P2K3 495 aaPredicted RBP16.58■□□□□ 0.24
TRIM27-202ENST00000377199 LRIG2O94898 1065 aa16.57■□□□□ 0.24
TRIM27-202ENST00000377199 KLHL2O95198 593 aa16.57■□□□□ 0.24
TRIM27-202ENST00000377199 GRK2P25098 689 aa16.57■□□□□ 0.24
TRIM27-202ENST00000377199 LIMK2P53671 638 aa16.57■□□□□ 0.24
TRIM27-202ENST00000377199 DAOAP59103 153 aa16.57■□□□□ 0.24
TRIM27-202ENST00000377199 GRM3Q14832 879 aa16.57■□□□□ 0.24
TRIM27-202ENST00000377199 FAM91A1Q658Y4 838 aa16.57■□□□□ 0.24
TRIM27-202ENST00000377199 IQSEC1Q6DN90 963 aa16.57■□□□□ 0.24
TRIM27-202ENST00000377199 CCNJLQ8IV13 435 aa16.57■□□□□ 0.24
TRIM27-202ENST00000377199 C3orf58Q8NDZ4 430 aa16.57■□□□□ 0.24
TRIM27-202ENST00000377199 IPMKQ8NFU5 416 aa16.57■□□□□ 0.24
TRIM27-202ENST00000377199 VPS39Q96JC1 886 aa16.57■□□□□ 0.24
TRIM27-202ENST00000377199 OMDQ99983 421 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms