RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 PCDHGA12O60330 932 aa21.64■■□□□ 1.05
VSX1-201ENST00000376707 DFNA5O60443 496 aa21.64■■□□□ 1.05
VSX1-201ENST00000376707 CLDN11O75508 207 aa21.64■■□□□ 1.05
VSX1-201ENST00000376707 GRK6P43250 576 aa21.64■■□□□ 1.05
VSX1-201ENST00000376707 IRAK1P51617 712 aa21.64■■□□□ 1.05
VSX1-201ENST00000376707 CCR5P51681 352 aa21.64■■□□□ 1.05
VSX1-201ENST00000376707 ADPRHP54922 357 aa21.64■■□□□ 1.05
VSX1-201ENST00000376707 TCP11X2Q5H9J9 407 aa21.64■■□□□ 1.05
VSX1-201ENST00000376707 ENOX1Q8TC92 643 aaKnown RBP21.64■■□□□ 1.05
VSX1-201ENST00000376707 OR8D1Q8WZ84 308 aa21.64■■□□□ 1.05
VSX1-201ENST00000376707 WDCPQ9H6R7 721 aa21.64■■□□□ 1.05
VSX1-201ENST00000376707 EBF2Q9HAK2 575 aa21.64■■□□□ 1.05
VSX1-201ENST00000376707 PIGVQ9NUD9 493 aa21.64■■□□□ 1.05
VSX1-201ENST00000376707 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.64■■□□□ 1.05
VSX1-201ENST00000376707 TPX2Q9ULW0 747 aaKnown RBP21.64■■□□□ 1.05
VSX1-201ENST00000376707 GOLGA8CPA6NN73 597 aa21.63■■□□□ 1.05
VSX1-201ENST00000376707 ATXN1LP0C7T5 689 aaKnown RBP21.63■■□□□ 1.05
VSX1-201ENST00000376707 CYP11B1P15538 503 aa21.63■■□□□ 1.05
VSX1-201ENST00000376707 SULT1E1P49888 294 aa21.63■■□□□ 1.05
VSX1-201ENST00000376707 VASPP50552 380 aaPredicted RBP21.63■■□□□ 1.05
VSX1-201ENST00000376707 CDH4P55283 916 aa21.63■■□□□ 1.05
VSX1-201ENST00000376707 IL9RQ01113 521 aa21.63■■□□□ 1.05
VSX1-201ENST00000376707 INAVAQ3KP66 663 aa21.63■■□□□ 1.05
VSX1-201ENST00000376707 BRMS1LQ5PSV4 323 aa21.63■■□□□ 1.05
VSX1-201ENST00000376707 KLHDC7AQ5VTJ3 777 aa21.63■■□□□ 1.05
VSX1-201ENST00000376707 OTUD1Q5VV17 481 aaPredicted RBP21.63■■□□□ 1.05
VSX1-201ENST00000376707 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.63■■□□□ 1.05
VSX1-201ENST00000376707 C14orf80Q86SX3 495 aa21.63■■□□□ 1.05
VSX1-201ENST00000376707 OR52K2Q8NGK3 314 aa21.63■■□□□ 1.05
VSX1-201ENST00000376707 GPT2Q8TD30 523 aa21.63■■□□□ 1.05
VSX1-201ENST00000376707 ALG14Q96F25 216 aa21.63■■□□□ 1.05
VSX1-201ENST00000376707 GBP4Q96PP9 640 aa21.63■■□□□ 1.05
VSX1-201ENST00000376707 NPY6RQ99463 290 aa21.63■■□□□ 1.05
VSX1-201ENST00000376707 NAA15Q9BXJ9 866 aaKnown RBP21.63■■□□□ 1.05
VSX1-201ENST00000376707 TKTL2Q9H0I9 626 aa21.63■■□□□ 1.05
VSX1-201ENST00000376707 MUC3BQ9H195 1237 aa21.63■■□□□ 1.05
VSX1-201ENST00000376707 PAXBP1Q9Y5B6 917 aa21.63■■□□□ 1.05
VSX1-201ENST00000376707 FHOD1Q9Y613 1164 aa21.63■■□□□ 1.05
VSX1-201ENST00000376707 AKAP13Q12802 2813 aa21.63■■□□□ 1.05
VSX1-201ENST00000376707 TBC1D3DA0A087WVF3 549 aa21.62■■□□□ 1.05
VSX1-201ENST00000376707 TBC1D3IA0A087WXS9 549 aa21.62■■□□□ 1.05
VSX1-201ENST00000376707 TBC1D3EA0A087X179 549 aa21.62■■□□□ 1.05
VSX1-201ENST00000376707 TBC1D3KA0A087X1G2 549 aa21.62■■□□□ 1.05
VSX1-201ENST00000376707 TBC1D3FA6NER0 549 aaPredicted RBP21.62■■□□□ 1.05
VSX1-201ENST00000376707 TBC1D3LB9A6J9 549 aa21.62■■□□□ 1.05
VSX1-201ENST00000376707 ATP9BO43861 1147 aa21.62■■□□□ 1.05
VSX1-201ENST00000376707 TBC1D3HP0C7X1 549 aa21.62■■□□□ 1.05
VSX1-201ENST00000376707 CD38P28907 300 aa21.62■■□□□ 1.05
VSX1-201ENST00000376707 CDH5P33151 784 aaPredicted RBP21.62■■□□□ 1.05
VSX1-201ENST00000376707 DRD3P35462 400 aa21.62■■□□□ 1.05
VSX1-201ENST00000376707 CXCR3P49682 368 aa21.62■■□□□ 1.05
VSX1-201ENST00000376707 FAM102AQ5T9C2 384 aaPredicted RBP21.62■■□□□ 1.05
VSX1-201ENST00000376707 TAF3Q5VWG9 929 aa21.62■■□□□ 1.05
VSX1-201ENST00000376707 FAM46CQ5VWP2 391 aa21.62■■□□□ 1.05
VSX1-201ENST00000376707 TBC1D3GQ6DHY5 549 aa21.62■■□□□ 1.05
VSX1-201ENST00000376707 TBC1D3CQ6IPX1 549 aa21.62■■□□□ 1.05
VSX1-201ENST00000376707 ERICH1Q86X53 443 aa21.62■■□□□ 1.05
VSX1-201ENST00000376707 TBC1D3Q8IZP1 549 aaPredicted RBP21.62■■□□□ 1.05
VSX1-201ENST00000376707 C18orf8Q96DM3 657 aa21.62■■□□□ 1.05
VSX1-201ENST00000376707 SERAC1Q96JX3 654 aa21.62■■□□□ 1.05
VSX1-201ENST00000376707 TOR4AQ9NXH8 423 aa21.62■■□□□ 1.05
VSX1-201ENST00000376707 ARHGEF38Q9NXL2 777 aa21.62■■□□□ 1.05
VSX1-201ENST00000376707 TBC1D30Q9Y2I9 924 aa21.62■■□□□ 1.05
VSX1-201ENST00000376707 A0A1B0GTQ1 180 aa21.61■■□□□ 1.05
VSX1-201ENST00000376707 TNFSF14O43557 240 aa21.61■■□□□ 1.05
VSX1-201ENST00000376707 ADCY5O95622 1261 aa21.61■■□□□ 1.05
VSX1-201ENST00000376707 F9P00740 461 aa21.61■■□□□ 1.05
VSX1-201ENST00000376707 WNT1P04628 370 aa21.61■■□□□ 1.05
VSX1-201ENST00000376707 ZNF18P17022 549 aa21.61■■□□□ 1.05
VSX1-201ENST00000376707 TFE3P19532 575 aaPredicted RBP21.61■■□□□ 1.05
VSX1-201ENST00000376707 GABRB2P47870 512 aa21.61■■□□□ 1.05
VSX1-201ENST00000376707 METAP1P53582 386 aa21.61■■□□□ 1.05
VSX1-201ENST00000376707 DEUP1Q05D60 604 aa21.61■■□□□ 1.05
VSX1-201ENST00000376707 DLG2Q15700 870 aa21.61■■□□□ 1.05
VSX1-201ENST00000376707 C5orf22Q49AR2 442 aa21.61■■□□□ 1.05
VSX1-201ENST00000376707 SLC45A4Q5BKX6 768 aa21.61■■□□□ 1.05
VSX1-201ENST00000376707 CDKAL1Q5VV42 579 aa21.61■■□□□ 1.05
VSX1-201ENST00000376707 CCNI2Q6ZMN8 369 aaPredicted RBP21.61■■□□□ 1.05
VSX1-201ENST00000376707 Q6ZVU0 165 aa21.61■■□□□ 1.05
VSX1-201ENST00000376707 ELF4Q99607 663 aaPredicted RBP21.61■■□□□ 1.05
VSX1-201ENST00000376707 OR51B4Q9Y5P0 310 aa21.61■■□□□ 1.05
VSX1-201ENST00000376707 FAM170AA1A519 330 aa21.6■■□□□ 1.05
VSX1-201ENST00000376707 C10orf142B7Z368 130 aa21.6■■□□□ 1.05
VSX1-201ENST00000376707 C1QTNF3-AMACRE9PGA6 284 aa21.6■■□□□ 1.05
VSX1-201ENST00000376707 PLK4O00444 970 aa21.6■■□□□ 1.05
VSX1-201ENST00000376707 SLC7A4O43246 635 aa21.6■■□□□ 1.05
VSX1-201ENST00000376707 BNIP3LO60238 219 aa21.6■■□□□ 1.05
VSX1-201ENST00000376707 CNTN5O94779 1100 aa21.6■■□□□ 1.05
VSX1-201ENST00000376707 RHOCP08134 193 aa21.6■■□□□ 1.05
VSX1-201ENST00000376707 UCHL3P15374 230 aa21.6■■□□□ 1.05
VSX1-201ENST00000376707 SCNN1AP37088 669 aa21.6■■□□□ 1.05
VSX1-201ENST00000376707 PPP2CBP62714 309 aa21.6■■□□□ 1.05
VSX1-201ENST00000376707 PPP2CAP67775 309 aa21.6■■□□□ 1.05
VSX1-201ENST00000376707 KRT83P78385 493 aa21.6■■□□□ 1.05
VSX1-201ENST00000376707 SCAPQ12770 1279 aa21.6■■□□□ 1.05
VSX1-201ENST00000376707 SLC25A52Q3SY17 297 aa21.6■■□□□ 1.05
VSX1-201ENST00000376707 PRAMEF14Q5SWL7 426 aa21.6■■□□□ 1.05
VSX1-201ENST00000376707 LRRC31Q6UY01 552 aa21.6■■□□□ 1.05
VSX1-201ENST00000376707 SH2D3CQ8N5H7 860 aa21.6■■□□□ 1.05
VSX1-201ENST00000376707 MSANTD4Q8NCY6 345 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms