RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 SBK1Q52WX2 424 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 WDR49Q8IV35 697 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 CSGALNACT1Q8TDX6 532 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 HASPINQ8TF76 798 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 PANX3Q96QZ0 392 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 ZNF222Q9UK12 451 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 ENTPD3O75355 529 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 SERPINE1P05121 402 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 RARGP13631 454 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 POLR2EP19388 210 aaKnown RBP12.67□□□□□ -0.38
VPS13A-204ENST00000376634 FGFR3P22607 806 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 TCEA2Q15560 299 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 CDC42EP5Q6NZY7 148 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 DOK6Q6PKX4 331 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 ILDR2Q71H61 639 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 ZSCAN18Q8TBC5 510 aaPredicted RBP12.67□□□□□ -0.38
VPS13A-204ENST00000376634 APOPT1Q96IL0 206 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 CDC42EP4Q9H3Q1 356 aaKnown RBP12.67□□□□□ -0.38
VPS13A-204ENST00000376634 MAPRE3Q9UPY8 281 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 NPR3P17342 541 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 KLRC1P26715 233 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 GJB7Q6PEY0 223 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 BHLHB9Q6PI77 547 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 DAW1Q8N136 415 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 KANSL3Q9P2N6 904 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 CASTOR2A6NHX0 329 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 LPCAT1Q8NF37 534 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 HNRNPLLQ8WVV9 542 aaKnown RBP12.67□□□□□ -0.38
VPS13A-204ENST00000376634 OXNAD1Q96HP4 312 aaPredicted RBP12.67□□□□□ -0.38
VPS13A-204ENST00000376634 QRFPRQ96P65 431 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 SLC39A8Q9C0K1 460 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 ZNF37AP17032 561 aaPredicted RBP12.67□□□□□ -0.38
VPS13A-204ENST00000376634 CYP2A13Q16696 494 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 ACTRT1Q8TDG2 376 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 FRMD6Q96NE9 622 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 PCDH9Q9HC56 1237 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 EPB41L4AQ9HCS5 686 aaPredicted RBP12.67□□□□□ -0.38
VPS13A-204ENST00000376634 RRN3Q9NYV6 651 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 COLGALT1Q8NBJ5 622 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 CAPSLQ8WWF8 208 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 SPG21Q9NZD8 308 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 OR10H2O60403 315 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 THOP1P52888 689 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 HUNKP57058 714 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 ELAVL2Q12926 359 aaKnown RBP12.67□□□□□ -0.38
VPS13A-204ENST00000376634 MYDGFQ969H8 173 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 ASB2Q96Q27 587 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 CYP3A43Q9HB55 503 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 CISHQ9NSE2 258 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 TMEM216Q9P0N5 145 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 PPP2R3BQ9Y5P8 575 aa12.67□□□□□ -0.38
VPS13A-204ENST00000376634 MCIDASD6RGH6 385 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 SGPL1O95470 568 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 NFIXQ14938 502 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 EIF3MQ7L2H7 374 aaKnown RBP12.66□□□□□ -0.38
VPS13A-204ENST00000376634 REXO1L1PQ8IX06 675 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 ZNF184Q99676 751 aaPredicted RBP12.66□□□□□ -0.38
VPS13A-204ENST00000376634 NUDT5Q9UKK9 219 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 MIA3Q5JRA6 1907 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 C15orf38-AP3S2A0A0A6YYH1 394 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 PPIDQ08752 370 aaKnown RBP12.66□□□□□ -0.38
VPS13A-204ENST00000376634 CRY1Q16526 586 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 ARPINQ7Z6K5 226 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 STK32CQ86UX6 486 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 MYLPFQ96A32 169 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 OPTCQ9UBM4 332 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 CKLFQ9UBR5 152 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 SGTAO43765 313 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 RBMXL2O75526 392 aaKnown RBP12.66□□□□□ -0.38
VPS13A-204ENST00000376634 COX7A2P14406 83 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 DNAJB2P25686 324 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 RAB27AP51159 221 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 FCHO2Q0JRZ9 810 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.66□□□□□ -0.38
VPS13A-204ENST00000376634 FAM131BQ86XD5 332 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 FBXO16Q8IX29 292 aaPredicted RBP12.66□□□□□ -0.38
VPS13A-204ENST00000376634 FAM25EA8MYX2 175 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 FOXN3O00409 490 aaPredicted RBP12.66□□□□□ -0.38
VPS13A-204ENST00000376634 RECQL5O94762 991 aaPredicted RBP12.66□□□□□ -0.38
VPS13A-204ENST00000376634 TKTL1P51854 596 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 C1QBPQ07021 282 aaKnown RBP12.66□□□□□ -0.38
VPS13A-204ENST00000376634 NAB1Q13506 487 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 PCNX4Q63HM2 1172 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 GNPTGQ9UJJ9 305 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 PSME2Q9UL46 239 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 BARX2Q9UMQ3 279 aaPredicted RBP12.66□□□□□ -0.38
VPS13A-204ENST00000376634 EIF2S3P41091 472 aaKnown RBP12.66□□□□□ -0.38
VPS13A-204ENST00000376634 MCL1Q07820 350 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 CROTQ9UKG9 612 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 DIP2AQ14689 1571 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 A0A087WXM4 84 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 BTN3A1O00481 513 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 HSF2Q03933 536 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 ARL15Q9NXU5 204 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 ING4Q9UNL4 249 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 CHRNGP07510 517 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 MIIPQ5JXC2 388 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 TRAPPC5Q8IUR0 188 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 TMEM176AQ96HP8 235 aa12.66□□□□□ -0.38
VPS13A-204ENST00000376634 MMADHCQ9H3L0 296 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms