RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 RNF39Q9H2S5 420 aa10.9□□□□□ -0.66
ABCF1-202ENST00000376545 OXSMQ9NWU1 459 aa10.9□□□□□ -0.66
ABCF1-202ENST00000376545 IRAK4Q9NWZ3 460 aa10.9□□□□□ -0.66
ABCF1-202ENST00000376545 FBXW11Q9UKB1 542 aa10.9□□□□□ -0.66
ABCF1-202ENST00000376545 SLC45A1Q9Y2W3 748 aa10.9□□□□□ -0.66
ABCF1-202ENST00000376545 CREB3O43889 395 aa10.9□□□□□ -0.66
ABCF1-202ENST00000376545 HUS1O60921 280 aa10.9□□□□□ -0.66
ABCF1-202ENST00000376545 PTPN1P18031 435 aaKnown RBP10.9□□□□□ -0.66
ABCF1-202ENST00000376545 DNAJB1P25685 340 aa10.9□□□□□ -0.66
ABCF1-202ENST00000376545 HK2P52789 917 aa10.9□□□□□ -0.66
ABCF1-202ENST00000376545 SNAPC2Q13487 334 aa10.9□□□□□ -0.66
ABCF1-202ENST00000376545 IQSEC1Q6DN90 963 aa10.9□□□□□ -0.66
ABCF1-202ENST00000376545 STRA8Q7Z7C7 330 aa10.9□□□□□ -0.66
ABCF1-202ENST00000376545 KBTBD6Q86V97 674 aa10.9□□□□□ -0.66
ABCF1-202ENST00000376545 PHTF2Q8N3S3 785 aa10.9□□□□□ -0.66
ABCF1-202ENST00000376545 SLC25A41Q8N5S1 370 aa10.9□□□□□ -0.66
ABCF1-202ENST00000376545 CCNYQ8ND76 341 aa10.9□□□□□ -0.66
ABCF1-202ENST00000376545 TMEM40Q8WWA1 233 aa10.9□□□□□ -0.66
ABCF1-202ENST00000376545 AGAP2Q99490 1192 aa10.9□□□□□ -0.66
ABCF1-202ENST00000376545 OXCT2Q9BYC2 517 aaPredicted RBP10.9□□□□□ -0.66
ABCF1-202ENST00000376545 FAM192AQ9GZU8 254 aa10.9□□□□□ -0.66
ABCF1-202ENST00000376545 ZNF385DQ9H6B1 395 aa10.9□□□□□ -0.66
ABCF1-202ENST00000376545 RNF19AQ9NV58 838 aa10.9□□□□□ -0.66
ABCF1-202ENST00000376545 TXNDC16Q9P2K2 825 aa10.9□□□□□ -0.66
ABCF1-202ENST00000376545 TRHDEQ9UKU6 1024 aa10.9□□□□□ -0.66
ABCF1-202ENST00000376545 POMPQ9Y244 141 aa10.9□□□□□ -0.66
ABCF1-202ENST00000376545 BPTFQ12830 3046 aa10.9□□□□□ -0.66
ABCF1-202ENST00000376545 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.89□□□□□ -0.67
ABCF1-202ENST00000376545 H3BNX3 289 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 KIF3CO14782 793 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 NRP1O14786 923 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 FBXO21O94952 628 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 F2P00734 622 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 SBK3P0C264 359 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 COX4I1P13073 169 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 HADHAP40939 763 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 GALNT2Q10471 571 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 SLC9B1Q4ZJI4 515 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 PDZD4Q76G19 769 aaPredicted RBP10.89□□□□□ -0.67
ABCF1-202ENST00000376545 RSPH3Q86UC2 560 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 LCA5Q86VQ0 697 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 NPWQ8N729 165 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 OR6J1Q8NGC5 347 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 RDH11Q8TC12 318 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 URGCPQ8TCY9 931 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 MAPK15Q8TD08 544 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 ZFAND2BQ8WV99 257 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 FAM149B1Q96BN6 582 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 PGLYRP2Q96PD5 576 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 TTC1Q99614 292 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 GOLGA2P5Q9HBQ8 144 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 SEPT10Q9P0V9 454 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 ADAMTS6Q9UKP5 1117 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 A0A096LPK6 155 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 KCNK1O00180 336 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 CLDN5O00501 218 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 SLC22A2O15244 555 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 ZBTB24O43167 697 aaPredicted RBP10.89□□□□□ -0.67
ABCF1-202ENST00000376545 MTSS1O43312 755 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 TIMM44O43615 452 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 PEX1O43933 1283 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 SORBS2O94875 1100 aaKnown RBP10.89□□□□□ -0.67
ABCF1-202ENST00000376545 SMIM10L2AP0DMW4 78 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 SMIM10L2BP0DMW5 78 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 ZNF135P52742 658 aaPredicted RBP10.89□□□□□ -0.67
ABCF1-202ENST00000376545 DAOAP59103 153 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 KLF10Q13118 480 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 GRB14Q14449 540 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 FSCBQ5H9T9 825 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 BHLHA9Q7RTU4 235 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 TNS4Q8IZW8 715 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 CPSF7Q8N684 471 aaKnown RBP10.89□□□□□ -0.67
ABCF1-202ENST00000376545 ARRDC4Q8NCT1 418 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 SMG8Q8ND04 991 aaKnown RBP10.89□□□□□ -0.67
ABCF1-202ENST00000376545 AZIN2Q96A70 460 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 ZNF669Q96BR6 464 aaPredicted RBP10.89□□□□□ -0.67
ABCF1-202ENST00000376545 MAML3Q96JK9 1138 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 VAT1Q99536 393 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 BFARQ9NZS9 450 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 VPS28Q9UK41 221 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 MATN2O00339 956 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 TRIM13O60858 407 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 C2P06681 752 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 PRKAA2P54646 552 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 IRF9Q00978 393 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 USP4Q13107 963 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 MSLNQ13421 630 aaPredicted RBP10.89□□□□□ -0.67
ABCF1-202ENST00000376545 GRM2Q14416 872 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 SNX17Q15036 470 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 C11orf91Q3C1V1 193 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 ACAD11Q709F0 780 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 TSC22D3Q99576 134 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 IL22Q9GZX6 179 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 DRC3Q9H069 523 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 ABHD16BQ9H3Z7 469 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 NMRAL1Q9HBL8 299 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 KLK14Q9P0G3 267 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 KLHL8Q9P2G9 620 aaPredicted RBP10.89□□□□□ -0.67
ABCF1-202ENST00000376545 ANKRD6Q9Y2G4 727 aa10.89□□□□□ -0.67
ABCF1-202ENST00000376545 ARHGAP42A6NI28 874 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms