RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 PKDCCQ504Y2 493 aa13.56□□□□□ -0.24
CLCN6-205ENST00000376492 TCP11X2Q5H9J9 407 aa13.56□□□□□ -0.24
CLCN6-205ENST00000376492 MIIPQ5JXC2 388 aa13.56□□□□□ -0.24
CLCN6-205ENST00000376492 NUGGCQ68CJ6 796 aa13.56□□□□□ -0.24
CLCN6-205ENST00000376492 TRIM65Q6PJ69 517 aa13.56□□□□□ -0.24
CLCN6-205ENST00000376492 TMEM270Q6UE05 265 aa13.56□□□□□ -0.24
CLCN6-205ENST00000376492 ENOSF1Q7L5Y1 443 aa13.56□□□□□ -0.24
CLCN6-205ENST00000376492 KCTD13Q8WZ19 329 aa13.56□□□□□ -0.24
CLCN6-205ENST00000376492 CRACR2AQ9BSW2 395 aa13.56□□□□□ -0.24
CLCN6-205ENST00000376492 NDST4Q9H3R1 872 aa13.56□□□□□ -0.24
CLCN6-205ENST00000376492 UBE2TQ9NPD8 197 aaPredicted RBP13.56□□□□□ -0.24
CLCN6-205ENST00000376492 CNGB3Q9NQW8 809 aa13.56□□□□□ -0.24
CLCN6-205ENST00000376492 SLCO3A1Q9UIG8 710 aa13.56□□□□□ -0.24
CLCN6-205ENST00000376492 CLCA2Q9UQC9 943 aa13.56□□□□□ -0.24
CLCN6-205ENST00000376492 PCDHB4Q9Y5E5 795 aa13.56□□□□□ -0.24
CLCN6-205ENST00000376492 ATMQ13315 3056 aa13.56□□□□□ -0.24
CLCN6-205ENST00000376492 EDDM13A0A1B0GTR0 161 aa13.55□□□□□ -0.24
CLCN6-205ENST00000376492 TEX51A0A1B0GUA7 166 aa13.55□□□□□ -0.24
CLCN6-205ENST00000376492 SMTNL1A8MU46 457 aa13.55□□□□□ -0.24
CLCN6-205ENST00000376492 LATO43561 262 aa13.55□□□□□ -0.24
CLCN6-205ENST00000376492 SETSIPP0DME0 302 aa13.55□□□□□ -0.24
CLCN6-205ENST00000376492 CKMT2P17540 419 aa13.55□□□□□ -0.24
CLCN6-205ENST00000376492 MZF1P28698 734 aaPredicted RBP13.55□□□□□ -0.24
CLCN6-205ENST00000376492 MAT2AP31153 395 aaKnown RBP13.55□□□□□ -0.24
CLCN6-205ENST00000376492 DRD3P35462 400 aa13.55□□□□□ -0.24
CLCN6-205ENST00000376492 RXRGP48443 463 aa13.55□□□□□ -0.24
CLCN6-205ENST00000376492 STK19P49842 368 aaPredicted RBP13.55□□□□□ -0.24
CLCN6-205ENST00000376492 SFSWAPQ12872 951 aaKnown RBP13.55□□□□□ -0.24
CLCN6-205ENST00000376492 ILKQ13418 452 aa13.55□□□□□ -0.24
CLCN6-205ENST00000376492 PROX2Q3B8N5 592 aa13.55□□□□□ -0.24
CLCN6-205ENST00000376492 TBC1D25Q3MII6 688 aa13.55□□□□□ -0.24
CLCN6-205ENST00000376492 HSP90AA4PQ58FG1 418 aa13.55□□□□□ -0.24
CLCN6-205ENST00000376492 CDKAL1Q5VV42 579 aa13.55□□□□□ -0.24
CLCN6-205ENST00000376492 NAPEPLDQ6IQ20 393 aa13.55□□□□□ -0.24
CLCN6-205ENST00000376492 PMF1Q6P1K2 205 aa13.55□□□□□ -0.24
CLCN6-205ENST00000376492 C11orf57Q6ZUT1 292 aaPredicted RBP13.55□□□□□ -0.24
CLCN6-205ENST00000376492 SND1Q7KZF4 910 aaKnown RBP eCLIP13.55□□□□□ -0.24
CLCN6-205ENST00000376492 UNC45BQ8IWX7 931 aa13.55□□□□□ -0.24
CLCN6-205ENST00000376492 ZNF557Q8N988 423 aaPredicted RBP13.55□□□□□ -0.24
CLCN6-205ENST00000376492 LSM14AQ8ND56 463 aaKnown RBP13.55□□□□□ -0.24
CLCN6-205ENST00000376492 RFFLQ8WZ73 363 aa13.55□□□□□ -0.24
CLCN6-205ENST00000376492 TFAP2BQ92481 460 aa13.55□□□□□ -0.24
CLCN6-205ENST00000376492 NAF1Q96HR8 494 aaKnown RBP13.55□□□□□ -0.24
CLCN6-205ENST00000376492 RPL10LQ96L21 214 aaKnown RBP13.55□□□□□ -0.24
CLCN6-205ENST00000376492 FCRL2Q96LA5 508 aaPredicted RBP13.55□□□□□ -0.24
CLCN6-205ENST00000376492 CAAP1Q9H8G2 361 aa13.55□□□□□ -0.24
CLCN6-205ENST00000376492 ERVMER34-1Q9H9K5 563 aa13.55□□□□□ -0.24
CLCN6-205ENST00000376492 XPO7Q9UIA9 1087 aaKnown RBP13.55□□□□□ -0.24
CLCN6-205ENST00000376492 CEP83Q9Y592 693 aa13.55□□□□□ -0.24
CLCN6-205ENST00000376492 PCDHB1Q9Y5F3 818 aa13.55□□□□□ -0.24
CLCN6-205ENST00000376492 SHROOM3Q8TF72 1996 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 TBC1D3DA0A087WVF3 549 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 TBC1D3IA0A087WXS9 549 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 TBC1D3EA0A087X179 549 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 TBC1D3KA0A087X1G2 549 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 TARSL2A2RTX5 802 aaKnown RBP13.54□□□□□ -0.24
CLCN6-205ENST00000376492 TBC1D3FA6NER0 549 aaPredicted RBP13.54□□□□□ -0.24
CLCN6-205ENST00000376492 CYSRT1A8MQ03 144 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 TBC1D3LB9A6J9 549 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 TRIM38O00635 465 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 CAPN9O14815 690 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 RTN2O75298 545 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 LUC7L3O95232 432 aaKnown RBP13.54□□□□□ -0.24
CLCN6-205ENST00000376492 MOCS2O96007 188 aaPredicted RBP13.54□□□□□ -0.24
CLCN6-205ENST00000376492 CALCAP01258 141 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 IL1BP01584 269 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 LTFP02788 710 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 TBC1D3HP0C7X1 549 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 C5AR1P21730 350 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 ACTN2P35609 894 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 ZNF165P49910 485 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 CFHR1Q03591 330 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 CNGA2Q16280 664 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 DCAF6Q58WW2 860 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 SLC45A4Q5BKX6 768 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 MS4A13Q5J8X5 152 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 TBC1D3GQ6DHY5 549 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 TBC1D3CQ6IPX1 549 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 DPY19L2P1Q6NXN4 242 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 LCLAT1Q6UWP7 414 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.54□□□□□ -0.24
CLCN6-205ENST00000376492 KDM7AQ6ZMT4 941 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 TBC1D3Q8IZP1 549 aaPredicted RBP13.54□□□□□ -0.24
CLCN6-205ENST00000376492 APCDD1Q8J025 514 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 SCML4Q8N228 414 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 DCBLD1Q8N8Z6 715 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 KDM1BQ8NB78 822 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 DQX1Q8TE96 717 aaKnown RBP13.54□□□□□ -0.24
CLCN6-205ENST00000376492 SLC35F5Q8WV83 523 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 PTPRN2Q92932 1015 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 ZSWIM1Q9BR11 485 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 IRX2Q9BZI1 471 aaPredicted RBP13.54□□□□□ -0.24
CLCN6-205ENST00000376492 FANCLQ9NW38 375 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 ARHGAP20Q9P2F6 1191 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 APEX2Q9UBZ4 518 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 CA5BQ9Y2D0 317 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 ITIH6Q6UXX5 1313 aa13.54□□□□□ -0.24
CLCN6-205ENST00000376492 TYW5A2RUC4 315 aaKnown RBP13.53□□□□□ -0.24
CLCN6-205ENST00000376492 LRRC10BA6NIK2 292 aa13.53□□□□□ -0.24
CLCN6-205ENST00000376492 SIGLEC6O43699 453 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms