RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 PLOD2O00469 737 aa11.74□□□□□ -0.53
TM9SF2-201ENST00000376387 OGTO15294 1046 aa11.74□□□□□ -0.53
TM9SF2-201ENST00000376387 GCATO75600 419 aa11.74□□□□□ -0.53
TM9SF2-201ENST00000376387 THRAP10827 490 aa11.74□□□□□ -0.53
TM9SF2-201ENST00000376387 ARSAP15289 507 aa11.74□□□□□ -0.53
TM9SF2-201ENST00000376387 TPSB2P20231 275 aa11.74□□□□□ -0.53
TM9SF2-201ENST00000376387 AP3M2P53677 418 aa11.74□□□□□ -0.53
TM9SF2-201ENST00000376387 CDH15P55291 814 aa11.74□□□□□ -0.53
TM9SF2-201ENST00000376387 TPSAB1Q15661 275 aa11.74□□□□□ -0.53
TM9SF2-201ENST00000376387 USP41Q3LFD5 358 aa11.74□□□□□ -0.53
TM9SF2-201ENST00000376387 LSM12Q3MHD2 195 aaKnown RBP11.74□□□□□ -0.53
TM9SF2-201ENST00000376387 ZNF667Q5HYK9 610 aa11.74□□□□□ -0.53
TM9SF2-201ENST00000376387 IL23RQ5VWK5 629 aa11.74□□□□□ -0.53
TM9SF2-201ENST00000376387 EEF1DP3Q658K8 133 aa11.74□□□□□ -0.53
TM9SF2-201ENST00000376387 STEAP4Q687X5 459 aa11.74□□□□□ -0.53
TM9SF2-201ENST00000376387 LRRC71Q8N4P6 559 aa11.74□□□□□ -0.53
TM9SF2-201ENST00000376387 PAF1Q8N7H5 531 aa11.74□□□□□ -0.53
TM9SF2-201ENST00000376387 C1orf127Q8N9H9 656 aa11.74□□□□□ -0.53
TM9SF2-201ENST00000376387 ACMSDQ8TDX5 336 aa11.74□□□□□ -0.53
TM9SF2-201ENST00000376387 ATP6V1E2Q96A05 226 aa11.74□□□□□ -0.53
TM9SF2-201ENST00000376387 LGMNQ99538 433 aa11.74□□□□□ -0.53
TM9SF2-201ENST00000376387 SLC4A5Q9BY07 1137 aa11.74□□□□□ -0.53
TM9SF2-201ENST00000376387 BCO2Q9BYV7 579 aa11.74□□□□□ -0.53
TM9SF2-201ENST00000376387 PLK2Q9NYY3 685 aa11.74□□□□□ -0.53
TM9SF2-201ENST00000376387 PGAP2Q9UHJ9 254 aa11.74□□□□□ -0.53
TM9SF2-201ENST00000376387 MAGED2Q9UNF1 606 aaPredicted RBP11.74□□□□□ -0.53
TM9SF2-201ENST00000376387 COL11A1P12107 1806 aaPredicted RBP11.74□□□□□ -0.53
TM9SF2-201ENST00000376387 FER1L6Q2WGJ9 1857 aa11.74□□□□□ -0.53
TM9SF2-201ENST00000376387 PRSS51A0A1B0GVH4 220 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 PFKMP08237 780 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 CNTFP26441 200 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 PRDX6P30041 224 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 NR1H2P55055 460 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 KCTD2Q14681 263 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 LPIN1Q14693 890 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 FAM219BQ5XKK7 198 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 SNRNP48Q6IEG0 339 aaKnown RBP11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 UNC5DQ6UXZ4 953 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 SCUBE3Q8IX30 993 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 BHMTQ93088 406 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 FCRL3Q96P31 734 aaPredicted RBP11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 PCYT2Q99447 389 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 AGAP2Q99490 1192 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 NPAS2Q99743 824 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 FERMT1Q9BQL6 677 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 B3GNT5Q9BYG0 378 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 NUF2Q9BZD4 464 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 DHX35Q9H5Z1 703 aaKnown RBP11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 ZNF638Q14966 1978 aaKnown RBP11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 ARHGAP10A1A4S6 786 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 SPATA31C2B4DYI2 1134 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 TNNC2P02585 160 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 ITGB3P05106 788 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 ZNF26P17031 533 aaPredicted RBP11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 MGAT5BQ3V5L5 792 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 HSP90AA5PQ58FG0 334 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 STYK1Q6J9G0 422 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 SPNS2Q8IVW8 549 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 FLAD1Q8NFF5 587 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 ADCY4Q8NFM4 1077 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 TSPAN14Q8NG11 270 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 KHSRPQ92945 711 aaKnown RBP eCLIP11.73□□□□□ -0.533e-7■■■□□ 16.5
TM9SF2-201ENST00000376387 CCT7Q99832 543 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 MRPL4Q9BYD3 311 aaKnown RBP11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 CILPO75339 1184 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 SUPT3HO75486 399 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 TFPTP0C1Z6 253 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 SULT2A1Q06520 285 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 SEMA5AQ13591 1074 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 ANKDD1AQ495B1 522 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 ZPBP2Q6X784 338 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 SIX5Q8N196 739 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 NSUN6Q8TEA1 469 aaKnown RBP11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 SREK1Q8WXA9 508 aaKnown RBP11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 TMA16Q96EY4 203 aaKnown RBP11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 PCDHAC1Q9H158 963 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 COQ10BQ9H8M1 238 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 EPS15L1Q9UBC2 864 aa11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 RSL24D1Q9UHA3 163 aaKnown RBP11.73□□□□□ -0.53
TM9SF2-201ENST00000376387 CROCCQ5TZA2 2017 aa11.72□□□□□ -0.53
TM9SF2-201ENST00000376387 RGSL1A5PLK6 1076 aa11.72□□□□□ -0.53
TM9SF2-201ENST00000376387 PEX10O60683 326 aa11.72□□□□□ -0.53
TM9SF2-201ENST00000376387 PRKCBP05771 671 aa11.72□□□□□ -0.53
TM9SF2-201ENST00000376387 PCNAP12004 261 aa11.72□□□□□ -0.53
TM9SF2-201ENST00000376387 NUMBP49757 651 aa11.72□□□□□ -0.53
TM9SF2-201ENST00000376387 CLK1P49759 484 aaKnown RBP11.72□□□□□ -0.53
TM9SF2-201ENST00000376387 NDST2P52849 883 aa11.72□□□□□ -0.53
TM9SF2-201ENST00000376387 PDK2Q15119 407 aa11.72□□□□□ -0.53
TM9SF2-201ENST00000376387 CDKL3Q8IVW4 592 aaPredicted RBP11.72□□□□□ -0.53
TM9SF2-201ENST00000376387 CHERPQ8IWX8 916 aaKnown RBP11.72□□□□□ -0.53
TM9SF2-201ENST00000376387 PYROXD2Q8N2H3 581 aa11.72□□□□□ -0.53
TM9SF2-201ENST00000376387 KIAA1958Q8N8K9 716 aa11.72□□□□□ -0.53
TM9SF2-201ENST00000376387 RNF149Q8NC42 400 aa11.72□□□□□ -0.53
TM9SF2-201ENST00000376387 LPIN3Q9BQK8 851 aa11.72□□□□□ -0.53
TM9SF2-201ENST00000376387 C2orf49Q9BVC5 232 aaPredicted RBP11.72□□□□□ -0.53
TM9SF2-201ENST00000376387 GATA5Q9BWX5 397 aaPredicted RBP11.72□□□□□ -0.53
TM9SF2-201ENST00000376387 CAAP1Q9H8G2 361 aa11.72□□□□□ -0.53
TM9SF2-201ENST00000376387 WDR41Q9HAD4 459 aa11.72□□□□□ -0.53
TM9SF2-201ENST00000376387 PRPF19Q9UMS4 504 aaKnown RBP11.72□□□□□ -0.53
TM9SF2-201ENST00000376387 CDY2AQ9Y6F7 541 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms