RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 RSL24D1Q9UHA3 163 aaKnown RBP6.41□□□□□ -1.38
PTPN3-202ENST00000374541 AAR2Q9Y312 384 aaKnown RBP6.41□□□□□ -1.38
PTPN3-202ENST00000374541 CNTNAP2Q9UHC6 1331 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 A0A087WXM4 84 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 USP27XA6NNY8 438 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 TRIM49D1C9J1S8 452 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 E9PBE3 544 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 UCHL3P15374 230 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 ACO1P21399 889 aaKnown RBP6.41□□□□□ -1.38
PTPN3-202ENST00000374541 NPY2RP49146 381 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 ARRB1P49407 418 aaPredicted RBP6.41□□□□□ -1.38
PTPN3-202ENST00000374541 MCL1Q07820 350 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 TOMM20Q15388 145 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 DDR2Q16832 855 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 ZBTB49Q6ZSB9 765 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 PEG10Q86TG7 708 aaKnown RBP6.41□□□□□ -1.38
PTPN3-202ENST00000374541 RBBP8NLQ8NC74 664 aaPredicted RBP6.41□□□□□ -1.38
PTPN3-202ENST00000374541 MYCBPAPQ8TBZ2 947 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 TRPC4APQ8TEL6 797 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 CDCA3Q99618 268 aaPredicted RBP6.41□□□□□ -1.38
PTPN3-202ENST00000374541 C1orf50Q9BV19 199 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 OSBPL6Q9BZF3 934 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 RBM12Q9NTZ6 932 aaKnown RBP6.41□□□□□ -1.38
PTPN3-202ENST00000374541 DDX43Q9NXZ2 648 aaKnown RBP6.41□□□□□ -1.38
PTPN3-202ENST00000374541 CRNNQ9UBG3 495 aaPredicted RBP6.41□□□□□ -1.38
PTPN3-202ENST00000374541 PDS5AQ29RF7 1337 aaKnown RBP6.41□□□□□ -1.38
PTPN3-202ENST00000374541 LRRC37A3O60309 1634 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 PIPSLA2A3N6 862 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 CD2BP2O95400 341 aaKnown RBP6.41□□□□□ -1.38
PTPN3-202ENST00000374541 ITGBL1O95965 494 aaPredicted RBP6.41□□□□□ -1.38
PTPN3-202ENST00000374541 GARTP22102 1010 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 PPP2R1BP30154 601 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 TGFBR2P37173 567 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 NAA20P61599 178 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 RPS7P62081 194 aaKnown RBP6.41□□□□□ -1.38
PTPN3-202ENST00000374541 FOXC1Q12948 553 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 GRIK3Q13003 919 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 TRIM32Q13049 653 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 DCTN2Q13561 401 aaKnown RBP6.41□□□□□ -1.38
PTPN3-202ENST00000374541 ZNF284Q2VY69 593 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 POM121L1PQ3SYA9 428 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 ATP6AP1LQ52LC2 224 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 FAM98BQ52LJ0 330 aaKnown RBP6.41□□□□□ -1.38
PTPN3-202ENST00000374541 SEL1L3Q68CR1 1132 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 KIF2BQ8N4N8 673 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 ATXN7L3BQ96GX2 97 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 ZNF512BQ96KM6 892 aaPredicted RBP6.41□□□□□ -1.38
PTPN3-202ENST00000374541 TRIM9Q9C026 710 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 RNPEPQ9H4A4 650 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 KLHL11Q9NVR0 708 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 SIT1Q9Y3P8 196 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 SNX13Q9Y5W8 968 aa6.41□□□□□ -1.38
PTPN3-202ENST00000374541 PHGDHO43175 533 aaKnown RBP6.4□□□□□ -1.38
PTPN3-202ENST00000374541 TDP2O95551 362 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 ITGB3P05106 788 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 IFNGR2P38484 337 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 SCTRP47872 440 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 PDK2Q15119 407 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 C17orf99Q6UX52 265 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 ZNF507Q8TCN5 953 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 ANKRD49Q8WVL7 239 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 KXD1Q9BQD3 176 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 PHACTR1Q9C0D0 580 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 UBE2ZQ9H832 354 aaPredicted RBP6.4□□□□□ -1.38
PTPN3-202ENST00000374541 TBC1D14Q9P2M4 693 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 MAPRE3Q9UPY8 281 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 ABCA3Q99758 1704 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 RGS20O76081 388 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 RARGP13631 454 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 ITGAXP20702 1163 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 HALP42357 657 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 PSMD4P55036 377 aaKnown RBP6.4□□□□□ -1.38
PTPN3-202ENST00000374541 NAB1Q13506 487 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 NFYCQ13952 458 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 TIGD7Q6NT04 549 aaPredicted RBP6.4□□□□□ -1.38
PTPN3-202ENST00000374541 ESRP1Q6NXG1 681 aaKnown RBP6.4□□□□□ -1.38
PTPN3-202ENST00000374541 PTAR1Q7Z6K3 402 aaPredicted RBP6.4□□□□□ -1.38
PTPN3-202ENST00000374541 RABEPKQ7Z6M1 372 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 LRRC34Q8IZ02 419 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 SLC20A1Q8WUM9 679 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 RORBQ92753 470 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 ZNF669Q96BR6 464 aaPredicted RBP6.4□□□□□ -1.38
PTPN3-202ENST00000374541 MIEF2Q96C03 454 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 CDX2Q99626 313 aaPredicted RBP6.4□□□□□ -1.38
PTPN3-202ENST00000374541 LMAN2LQ9H0V9 348 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 TMEM8AQ9HCN3 771 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 ANKEF1Q9NU02 776 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 FAM86C2PA6NEL3 165 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 RBP3P10745 1247 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 PABPC1P11940 636 aaKnown RBP6.4□□□□□ -1.38
PTPN3-202ENST00000374541 NCAM1P13591 858 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 EIF2B2P49770 351 aaKnown RBP6.4□□□□□ -1.38
PTPN3-202ENST00000374541 GDF6Q6KF10 455 aaPredicted RBP6.4□□□□□ -1.38
PTPN3-202ENST00000374541 TMPRSS6Q8IU80 811 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 ANKS1AQ92625 1134 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 PDCD10Q9BUL8 212 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 UGT2B28Q9BY64 529 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 HDHD2Q9H0R4 259 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 NCKIPSDQ9NZQ3 722 aa6.4□□□□□ -1.38
PTPN3-202ENST00000374541 SPASTQ9UBP0 616 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms