RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 NET1Q7Z628 596 aaPredicted RBP15.91■□□□□ 0.14
TMEM50A-201ENST00000374358 FAM35AQ86V20 835 aa15.91■□□□□ 0.14
TMEM50A-201ENST00000374358 PSTKQ8IV42 348 aaKnown RBP15.91■□□□□ 0.14
TMEM50A-201ENST00000374358 PHC3Q8NDX5 983 aa15.91■□□□□ 0.14
TMEM50A-201ENST00000374358 SENP8Q96LD8 212 aa15.91■□□□□ 0.14
TMEM50A-201ENST00000374358 IARS2Q9NSE4 1012 aaKnown RBP15.91■□□□□ 0.14
TMEM50A-201ENST00000374358 GNEQ9Y223 722 aaKnown RBP15.91■□□□□ 0.14
TMEM50A-201ENST00000374358 TK2O00142 265 aa15.91■□□□□ 0.14
TMEM50A-201ENST00000374358 ZBTB14O43829 449 aa15.91■□□□□ 0.14
TMEM50A-201ENST00000374358 CHRNGP07510 517 aa15.91■□□□□ 0.14
TMEM50A-201ENST00000374358 NMBRP28336 390 aa15.91■□□□□ 0.14
TMEM50A-201ENST00000374358 GCKP35557 465 aa15.91■□□□□ 0.14
TMEM50A-201ENST00000374358 GLRBP48167 497 aa15.91■□□□□ 0.14
TMEM50A-201ENST00000374358 CCNHP51946 323 aaPredicted RBP15.91■□□□□ 0.14
TMEM50A-201ENST00000374358 SEMA3BQ13214 749 aa15.91■□□□□ 0.14
TMEM50A-201ENST00000374358 ANKRD20A4Q4UJ75 823 aa15.91■□□□□ 0.14
TMEM50A-201ENST00000374358 SPANXN3Q5MJ09 141 aa15.91■□□□□ 0.14
TMEM50A-201ENST00000374358 OTOP3Q7RTS5 596 aa15.91■□□□□ 0.14
TMEM50A-201ENST00000374358 PLEKHH3Q7Z736 793 aa15.91■□□□□ 0.14
TMEM50A-201ENST00000374358 TOP6BLQ8N6T0 577 aa15.91■□□□□ 0.14
TMEM50A-201ENST00000374358 ZNF419Q96HQ0 510 aaPredicted RBP15.91■□□□□ 0.14
TMEM50A-201ENST00000374358 GAD1Q99259 594 aa15.91■□□□□ 0.14
TMEM50A-201ENST00000374358 CPNE1Q99829 537 aa15.91■□□□□ 0.14
TMEM50A-201ENST00000374358 LRRC40Q9H9A6 602 aa15.91■□□□□ 0.14
TMEM50A-201ENST00000374358 C20orf96Q9NUD7 363 aaPredicted RBP15.91■□□□□ 0.14
TMEM50A-201ENST00000374358 CPA4Q9UI42 421 aa15.91■□□□□ 0.14
TMEM50A-201ENST00000374358 G3BP2Q9UN86 482 aaKnown RBP15.91■□□□□ 0.14
TMEM50A-201ENST00000374358 CASTOR2A6NHX0 329 aa15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 LIN7AO14910 233 aaPredicted RBP15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 PHGDHO43175 533 aaKnown RBP15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 XPOTO43592 962 aaKnown RBP15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 AVPR1AP37288 418 aa15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 LIMK2P53671 638 aa15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 DNAL1Q4LDG9 190 aa15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 TCHHL1Q5QJ38 904 aaPredicted RBP15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 IZUMO2Q6UXV1 221 aa15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 FRMD7Q6ZUT3 714 aa15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 MYLK4Q86YV6 388 aaPredicted RBP15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 SPATA22Q8NHS9 363 aa15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 DDX50Q9BQ39 737 aaKnown RBP15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 FERMT1Q9BQL6 677 aa15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 PPP1R12CQ9BZL4 782 aa15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 COG4Q9H9E3 785 aa15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 MIOSQ9NXC5 875 aa15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 LRCH1Q9Y2L9 728 aa15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 G3V2L1 256 aa15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 NEMP1O14524 444 aa15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 GABRDO14764 452 aa15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 MAP3K7O43318 606 aa15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 KIF1CO43896 1103 aaKnown RBP15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 JCHAINP01591 159 aa15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 CTSHP09668 335 aa15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 PSEN2P49810 448 aa15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 COPAP53621 1224 aa15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 ZNF460Q14592 562 aa15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 TRMT5Q32P41 509 aaKnown RBP15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 STXBP5Q5T5C0 1151 aa15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 RNF111Q6ZNA4 994 aa15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 RAPH1Q70E73 1250 aa15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 TMEM135Q86UB9 458 aa15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 KCNMB4Q86W47 210 aa15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 SPATA6LQ8N4H0 392 aa15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 PPP1R10Q96QC0 940 aaKnown RBP15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 NAT9Q9BTE0 207 aa15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 TKTL2Q9H0I9 626 aa15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 TSPYL2Q9H2G4 693 aaPredicted RBP15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 BFARQ9NZS9 450 aa15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 CLEC11AQ9Y240 323 aa15.9■□□□□ 0.14
TMEM50A-201ENST00000374358 LRIG2O94898 1065 aa15.89■□□□□ 0.13
TMEM50A-201ENST00000374358 C2P06681 752 aa15.89■□□□□ 0.13
TMEM50A-201ENST00000374358 UBTFL6P0CB48 400 aaPredicted RBP15.89■□□□□ 0.13
TMEM50A-201ENST00000374358 SRGAP2BP0DMP2 458 aa15.89■□□□□ 0.13
TMEM50A-201ENST00000374358 CYP2B6P20813 491 aa15.89■□□□□ 0.13
TMEM50A-201ENST00000374358 PPIDQ08752 370 aaKnown RBP15.89■□□□□ 0.13
TMEM50A-201ENST00000374358 KCTD11Q693B1 232 aa15.89■□□□□ 0.13
TMEM50A-201ENST00000374358 CCNJLQ8IV13 435 aa15.89■□□□□ 0.13
TMEM50A-201ENST00000374358 HASPINQ8TF76 798 aa15.89■□□□□ 0.13
TMEM50A-201ENST00000374358 KCTD13Q8WZ19 329 aa15.89■□□□□ 0.13
TMEM50A-201ENST00000374358 OR52B2Q96RD2 323 aa15.89■□□□□ 0.13
TMEM50A-201ENST00000374358 ZNF184Q99676 751 aaPredicted RBP15.89■□□□□ 0.13
TMEM50A-201ENST00000374358 COLEC11Q9BWP8 271 aa15.89■□□□□ 0.13
TMEM50A-201ENST00000374358 ZNF212Q9UDV6 495 aa15.89■□□□□ 0.13
TMEM50A-201ENST00000374358 SLC39A10Q9ULF5 831 aa15.89■□□□□ 0.13
TMEM50A-201ENST00000374358 HSPA4LO95757 839 aa15.89■□□□□ 0.13
TMEM50A-201ENST00000374358 MX2P20592 715 aa15.89■□□□□ 0.13
TMEM50A-201ENST00000374358 GARSP41250 739 aaKnown RBP15.89■□□□□ 0.13
TMEM50A-201ENST00000374358 SERPINB8P50452 374 aa15.89■□□□□ 0.13
TMEM50A-201ENST00000374358 CDK18Q07002 472 aa15.89■□□□□ 0.13
TMEM50A-201ENST00000374358 EML3Q32P44 896 aa15.89■□□□□ 0.13
TMEM50A-201ENST00000374358 GRTP1Q5TC63 336 aa15.89■□□□□ 0.13
TMEM50A-201ENST00000374358 PPFIBP2Q8ND30 876 aa15.89■□□□□ 0.13
TMEM50A-201ENST00000374358 URGCPQ8TCY9 931 aa15.89■□□□□ 0.13
TMEM50A-201ENST00000374358 WDR55Q9H6Y2 383 aaPredicted RBP15.89■□□□□ 0.13
TMEM50A-201ENST00000374358 CASS4Q9NQ75 786 aa15.89■□□□□ 0.13
TMEM50A-201ENST00000374358 OR12D3Q9UGF7 316 aa15.89■□□□□ 0.13
TMEM50A-201ENST00000374358 FBXW11Q9UKB1 542 aa15.89■□□□□ 0.13
TMEM50A-201ENST00000374358 SF3B1O75533 1304 aaKnown RBP eCLIP15.88■□□□□ 0.13
TMEM50A-201ENST00000374358 ENO4A6NNW6 628 aa15.88■□□□□ 0.13
TMEM50A-201ENST00000374358 MT-CYBP00156 380 aaPredicted RBP15.88■□□□□ 0.13
TMEM50A-201ENST00000374358 SKIP12755 728 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms