RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 NCAM2O15394 837 aa16.32■□□□□ 0.2
CNKSR1-202ENST00000374253 GATMP50440 423 aa16.32■□□□□ 0.2
CNKSR1-202ENST00000374253 USP46P62068 366 aa16.32■□□□□ 0.2
CNKSR1-202ENST00000374253 IRF9Q00978 393 aa16.32■□□□□ 0.2
CNKSR1-202ENST00000374253 OCRLQ01968 901 aa16.32■□□□□ 0.2
CNKSR1-202ENST00000374253 ARHGAP12Q8IWW6 846 aa16.32■□□□□ 0.2
CNKSR1-202ENST00000374253 SKA1Q96BD8 255 aa16.32■□□□□ 0.2
CNKSR1-202ENST00000374253 EBF4Q9BQW3 602 aa16.32■□□□□ 0.2
CNKSR1-202ENST00000374253 SLC39A8Q9C0K1 460 aa16.32■□□□□ 0.2
CNKSR1-202ENST00000374253 CASS4Q9NQ75 786 aa16.32■□□□□ 0.2
CNKSR1-202ENST00000374253 DSEQ9UL01 958 aa16.32■□□□□ 0.2
CNKSR1-202ENST00000374253 MTO1Q9Y2Z2 717 aaKnown RBP16.32■□□□□ 0.2
CNKSR1-202ENST00000374253 FCHO1O14526 889 aa16.31■□□□□ 0.2
CNKSR1-202ENST00000374253 TBX18O95935 607 aa16.31■□□□□ 0.2
CNKSR1-202ENST00000374253 PBX3P40426 434 aa16.31■□□□□ 0.2
CNKSR1-202ENST00000374253 STX3Q13277 289 aa16.31■□□□□ 0.2
CNKSR1-202ENST00000374253 POU6F1Q14863 301 aa16.31■□□□□ 0.2
CNKSR1-202ENST00000374253 ACCSLQ4AC99 568 aa16.31■□□□□ 0.2
CNKSR1-202ENST00000374253 ATG16L1Q676U5 607 aa16.31■□□□□ 0.2
CNKSR1-202ENST00000374253 TFAP2DQ7Z6R9 452 aa16.31■□□□□ 0.2
CNKSR1-202ENST00000374253 C10orf107Q8IVU9 208 aa16.31■□□□□ 0.2
CNKSR1-202ENST00000374253 ATPAF2Q8N5M1 289 aa16.31■□□□□ 0.2
CNKSR1-202ENST00000374253 ATAD1Q8NBU5 361 aa16.31■□□□□ 0.2
CNKSR1-202ENST00000374253 MIPEPQ99797 713 aa16.31■□□□□ 0.2
CNKSR1-202ENST00000374253 SNX15Q9NRS6 342 aa16.31■□□□□ 0.2
CNKSR1-202ENST00000374253 NLRC5Q86WI3 1866 aa16.31■□□□□ 0.2
CNKSR1-202ENST00000374253 MYCP01106 439 aaPredicted RBP16.3■□□□□ 0.2
CNKSR1-202ENST00000374253 IGLV3-25P01717 112 aa16.3■□□□□ 0.2
CNKSR1-202ENST00000374253 PRKCGP05129 697 aa16.3■□□□□ 0.2
CNKSR1-202ENST00000374253 GP5P40197 560 aa16.3■□□□□ 0.2
CNKSR1-202ENST00000374253 TUBP50607 506 aa16.3■□□□□ 0.2
CNKSR1-202ENST00000374253 SPANXN3Q5MJ09 141 aa16.3■□□□□ 0.2
CNKSR1-202ENST00000374253 FSTL4Q6MZW2 842 aa16.3■□□□□ 0.2
CNKSR1-202ENST00000374253 TIFABQ6ZNK6 161 aa16.3■□□□□ 0.2
CNKSR1-202ENST00000374253 PCSK9Q8NBP7 692 aaKnown RBP16.3■□□□□ 0.2
CNKSR1-202ENST00000374253 ZNF398Q8TD17 642 aa16.3■□□□□ 0.2
CNKSR1-202ENST00000374253 ABCC13Q9NSE7 274 aa16.3■□□□□ 0.2
CNKSR1-202ENST00000374253 PPARGC1AQ9UBK2 798 aaKnown RBP16.3■□□□□ 0.2
CNKSR1-202ENST00000374253 PTPRDP23468 1912 aa16.3■□□□□ 0.2
CNKSR1-202ENST00000374253 KLF11O14901 512 aa16.3■□□□□ 0.2
CNKSR1-202ENST00000374253 PLIN3O60664 434 aa16.3■□□□□ 0.2
CNKSR1-202ENST00000374253 PMPCBO75439 489 aa16.3■□□□□ 0.2
CNKSR1-202ENST00000374253 CCR1P32246 355 aa16.3■□□□□ 0.2
CNKSR1-202ENST00000374253 GTF2A1P52655 376 aaPredicted RBP16.3■□□□□ 0.2
CNKSR1-202ENST00000374253 ITPRIPL1Q6GPH6 555 aa16.3■□□□□ 0.2
CNKSR1-202ENST00000374253 CYS1Q717R9 158 aa16.3■□□□□ 0.2
CNKSR1-202ENST00000374253 TMEM135Q86UB9 458 aa16.3■□□□□ 0.2
CNKSR1-202ENST00000374253 KCNMB4Q86W47 210 aa16.3■□□□□ 0.2
CNKSR1-202ENST00000374253 CCNJLQ8IV13 435 aa16.3■□□□□ 0.2
CNKSR1-202ENST00000374253 PNPLA1Q8N8W4 532 aa16.3■□□□□ 0.2
CNKSR1-202ENST00000374253 NAT9Q9BTE0 207 aa16.3■□□□□ 0.2
CNKSR1-202ENST00000374253 TBC1D13Q9NVG8 400 aa16.3■□□□□ 0.2
CNKSR1-202ENST00000374253 MKS1Q9NXB0 559 aa16.3■□□□□ 0.2
CNKSR1-202ENST00000374253 ARHGEF38Q9NXL2 777 aa16.3■□□□□ 0.2
CNKSR1-202ENST00000374253 TGDSO95455 350 aa16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 CNTFP26441 200 aa16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 ALDH18A1P54886 795 aaKnown RBP16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 PCLAFQ15004 111 aa16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 NOMO2Q5JPE7 1267 aa16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 TEDDM1Q5T9Z0 273 aa16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 C4orf50Q6ZRC1 276 aa16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 RNF180Q86T96 592 aa16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 CRLF3Q8IUI8 442 aa16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 FAM13CQ8NE31 585 aa16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 DPF3Q92784 378 aa16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 TACO1Q9BSH4 297 aaKnown RBP16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 UNKQ9C0B0 810 aaKnown RBP16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 TRHDEQ9UKU6 1024 aa16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 SLC27A5Q9Y2P5 690 aa16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 HS3ST4Q9Y661 456 aa16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 TTC24A2A3L6 582 aaPredicted RBP16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 HMBSP08397 361 aa16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 FGF3P11487 239 aaPredicted RBP16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 GM2AP17900 193 aa16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 ARRB2P32121 409 aa16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 SP3Q02447 781 aa16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 RCN2Q14257 317 aa16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 MAPRE1Q15691 268 aaKnown RBP16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 MBLAC2Q68D91 279 aa16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 RFWD3Q6PCD5 774 aa16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 CCDC91Q7Z6B0 441 aa16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 CD99L2Q8TCZ2 262 aa16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 GLT1D1Q96MS3 346 aa16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 C7orf26Q96N11 449 aa16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 RILPQ96NA2 401 aa16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 RBBP8Q99708 897 aa16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 OSBPL2Q9H1P3 480 aa16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 HBS1LQ9Y450 684 aaKnown RBP16.29■□□□□ 0.2
CNKSR1-202ENST00000374253 NT5C1B-RDH14C9J2C7 533 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 GLRA3O75311 464 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 CAPN15O75808 1086 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 ATP5HO75947 161 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 AVPR1AP37288 418 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 CHRNA4P43681 627 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 EIF4EBP2Q13542 120 aaPredicted RBP16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 PCSK7Q16549 785 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 MIB1Q86YT6 1006 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 TREML1Q86YW5 311 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 FBXO27Q8NI29 283 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 AGR3Q8TD06 166 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms