RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 FAM72BQ86X60 149 aa12.33□□□□□ -0.44
HDAC8-201ENST00000373554 ALG14Q96F25 216 aa12.33□□□□□ -0.44
HDAC8-201ENST00000373554 EIF3CQ99613 913 aaKnown RBP12.33□□□□□ -0.44
HDAC8-201ENST00000373554 NUP85Q9BW27 656 aa12.33□□□□□ -0.44
HDAC8-201ENST00000373554 DUSP15Q9H1R2 295 aaPredicted RBP12.33□□□□□ -0.44
HDAC8-201ENST00000373554 NHEJ1Q9H9Q4 299 aaPredicted RBP12.33□□□□□ -0.44
HDAC8-201ENST00000373554 ATP13A1Q9HD20 1204 aa12.33□□□□□ -0.44
HDAC8-201ENST00000373554 PRSS16Q9NQE7 514 aa12.33□□□□□ -0.44
HDAC8-201ENST00000373554 TMEM248Q9NWD8 314 aa12.33□□□□□ -0.44
HDAC8-201ENST00000373554 PCSK1NQ9UHG2 260 aa12.33□□□□□ -0.44
HDAC8-201ENST00000373554 IP6K2Q9UHH9 426 aa12.33□□□□□ -0.44
HDAC8-201ENST00000373554 SLCO3A1Q9UIG8 710 aa12.33□□□□□ -0.44
HDAC8-201ENST00000373554 ANAPC7Q9UJX3 599 aa12.33□□□□□ -0.44
HDAC8-201ENST00000373554 NENFQ9UMX5 172 aa12.33□□□□□ -0.44
HDAC8-201ENST00000373554 CYP8B1Q9UNU6 501 aa12.33□□□□□ -0.44
HDAC8-201ENST00000373554 AP4E1Q9UPM8 1137 aa12.33□□□□□ -0.44
HDAC8-201ENST00000373554 OR51B4Q9Y5P0 310 aa12.33□□□□□ -0.44
HDAC8-201ENST00000373554 CKAP5Q14008 2032 aa12.33□□□□□ -0.44
HDAC8-201ENST00000373554 IGHV1OR15-9A0A0B4J2B8 117 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 A0A0D9SEW6 157 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 TARSL2A2RTX5 802 aaKnown RBP12.32□□□□□ -0.44
HDAC8-201ENST00000373554 TTC34A8MYJ7 566 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 CREB3O43889 395 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 RNASEH1O60930 286 aaKnown RBP12.32□□□□□ -0.44
HDAC8-201ENST00000373554 SIN3BO75182 1162 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 LRCH4O75427 683 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 EPN2O95208 641 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 DNTTP04053 509 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 H2AFZP0C0S5 128 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 MIPP30301 263 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 HTR7P34969 479 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 PCK1P35558 622 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 VASPP50552 380 aaPredicted RBP12.32□□□□□ -0.44
HDAC8-201ENST00000373554 TPI1P60174 286 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 RPL6Q02878 288 aaKnown RBP12.32□□□□□ -0.44
HDAC8-201ENST00000373554 GNA12Q03113 381 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 ZBTB16Q05516 673 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 PIGHQ14442 188 aaPredicted RBP12.32□□□□□ -0.44
HDAC8-201ENST00000373554 ASTE1Q2TB18 679 aaPredicted RBP12.32□□□□□ -0.44
HDAC8-201ENST00000373554 TTC31Q49AM3 519 aaPredicted RBP12.32□□□□□ -0.44
HDAC8-201ENST00000373554 ACCSLQ4AC99 568 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 ARTNQ5T4W7 220 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 ZNF776Q68DI1 518 aaPredicted RBP12.32□□□□□ -0.44
HDAC8-201ENST00000373554 H2AFVQ71UI9 128 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 NLRP14Q86W24 1093 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 PYROXD2Q8N2H3 581 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 DCLK2Q8N568 766 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 GPR161Q8N6U8 529 aaKnown RBP12.32□□□□□ -0.44
HDAC8-201ENST00000373554 OR7D4Q8NG98 312 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 ZNF564Q8TBZ8 553 aaPredicted RBP12.32□□□□□ -0.44
HDAC8-201ENST00000373554 ARHGEF26Q96DR7 871 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 CHP1Q99653 195 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 SPON2Q9BUD6 331 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 SNRNP25Q9BV90 132 aaKnown RBP12.32□□□□□ -0.44
HDAC8-201ENST00000373554 MTG2Q9H4K7 406 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 DHX35Q9H5Z1 703 aaKnown RBP12.32□□□□□ -0.44
HDAC8-201ENST00000373554 CATSPERBQ9H7T0 1116 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 GPATCH2LQ9NWQ4 482 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 USP36Q9P275 1121 aaKnown RBP12.32□□□□□ -0.44
HDAC8-201ENST00000373554 CTTNBP2NLQ9P2B4 639 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 UVRAGQ9P2Y5 699 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 ZNF212Q9UDV6 495 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 DNAI1Q9UI46 699 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 VPS51Q9UID3 782 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 USP18Q9UMW8 372 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 NEU3Q9UQ49 428 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 HS3ST2Q9Y278 367 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 PCDHGA5Q9Y5G8 931 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 GPR179Q6PRD1 2367 aa12.32□□□□□ -0.44
HDAC8-201ENST00000373554 OTOGLQ3ZCN5 2332 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 MYO1FO00160 1098 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 CBX4O00257 560 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 FGF10O15520 208 aaPredicted RBP12.31□□□□□ -0.44
HDAC8-201ENST00000373554 RAMP2O60895 175 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 LRP3O75074 770 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 NDUFS2O75306 463 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 TMEM253P0C7T8 217 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 TPMTP51580 245 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 SPEM2Q0P670 501 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 SEMA3BQ13214 749 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 ELAVL3Q14576 367 aaKnown RBP12.31□□□□□ -0.44
HDAC8-201ENST00000373554 SPDYCQ5MJ68 293 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 ERMARDQ5T6L9 678 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 C9orf64Q5T6V5 341 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 IL31Q6EBC2 164 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 RETSATQ6NUM9 610 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 CYP2U1Q7Z449 544 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 DSG4Q86SJ6 1040 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 PSTKQ8IV42 348 aaKnown RBP12.31□□□□□ -0.44
HDAC8-201ENST00000373554 TMEFF1Q8IYR6 380 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 SH2D3CQ8N5H7 860 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 ARFGAP1Q8N6T3 406 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 FRMD1Q8N878 549 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 NIPA2Q8N8Q9 360 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 RTL3Q8N8U3 475 aaKnown RBP12.31□□□□□ -0.44
HDAC8-201ENST00000373554 TC2NQ8N9U0 490 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 ATP11CQ8NB49 1132 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 CCDC114Q96M63 670 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 PEBP4Q96S96 227 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms