RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 NAA15Q9BXJ9 866 aaKnown RBP19.81■□□□□ 0.76
TRAPPC3-204ENST00000373166 PDCL3Q9H2J4 239 aa19.81■□□□□ 0.76
TRAPPC3-204ENST00000373166 EBF2Q9HAK2 575 aa19.81■□□□□ 0.76
TRAPPC3-204ENST00000373166 STIM2Q9P246 746 aa19.81■□□□□ 0.76
TRAPPC3-204ENST00000373166 LIMA1Q9UHB6 759 aaKnown RBP19.81■□□□□ 0.76
TRAPPC3-204ENST00000373166 ADAMTS1Q9UHI8 967 aa19.81■□□□□ 0.76
TRAPPC3-204ENST00000373166 FZD4Q9ULV1 537 aa19.81■□□□□ 0.76
TRAPPC3-204ENST00000373166 TPX2Q9ULW0 747 aaKnown RBP19.81■□□□□ 0.76
TRAPPC3-204ENST00000373166 ASH1LQ9NR48 2969 aaKnown RBP19.81■□□□□ 0.76
TRAPPC3-204ENST00000373166 GOLGA6L7A0A1B0GV03 622 aa19.8■□□□□ 0.76
TRAPPC3-204ENST00000373166 F8VZ95 297 aa19.8■□□□□ 0.76
TRAPPC3-204ENST00000373166 CAPN9O14815 690 aa19.8■□□□□ 0.76
TRAPPC3-204ENST00000373166 C1QL1O75973 258 aa19.8■□□□□ 0.76
TRAPPC3-204ENST00000373166 CCR5P51681 352 aa19.8■□□□□ 0.76
TRAPPC3-204ENST00000373166 SNX16P57768 344 aa19.8■□□□□ 0.76
TRAPPC3-204ENST00000373166 ARID5BQ14865 1188 aa19.8■□□□□ 0.76
TRAPPC3-204ENST00000373166 SLC45A4Q5BKX6 768 aa19.8■□□□□ 0.76
TRAPPC3-204ENST00000373166 FBXL19Q6PCT2 694 aa19.8■□□□□ 0.76
TRAPPC3-204ENST00000373166 MMAAQ8IVH4 418 aaKnown RBP19.8■□□□□ 0.76
TRAPPC3-204ENST00000373166 CCDC117Q8IWD4 279 aaPredicted RBP19.8■□□□□ 0.76
TRAPPC3-204ENST00000373166 KDM1BQ8NB78 822 aa19.8■□□□□ 0.76
TRAPPC3-204ENST00000373166 C1orf131Q8NDD1 294 aaKnown RBP19.8■□□□□ 0.76
TRAPPC3-204ENST00000373166 TSC1Q92574 1164 aa19.8■□□□□ 0.76
TRAPPC3-204ENST00000373166 PCMTD1Q96MG8 357 aaPredicted RBP19.8■□□□□ 0.76
TRAPPC3-204ENST00000373166 SERPINB11Q96P15 392 aa19.8■□□□□ 0.76
TRAPPC3-204ENST00000373166 FCRL3Q96P31 734 aaPredicted RBP19.8■□□□□ 0.76
TRAPPC3-204ENST00000373166 DDX50Q9BQ39 737 aaKnown RBP19.8■□□□□ 0.76
TRAPPC3-204ENST00000373166 STK33Q9BYT3 514 aa19.8■□□□□ 0.76
TRAPPC3-204ENST00000373166 FAM207AQ9NSI2 230 aaPredicted RBP19.8■□□□□ 0.76
TRAPPC3-204ENST00000373166 DAAM1Q9Y4D1 1078 aa19.8■□□□□ 0.76
TRAPPC3-204ENST00000373166 RAI2Q9Y5P3 530 aa19.8■□□□□ 0.76
TRAPPC3-204ENST00000373166 A0A1W2PR77 199 aa19.79■□□□□ 0.76
TRAPPC3-204ENST00000373166 TARSL2A2RTX5 802 aaKnown RBP19.79■□□□□ 0.76
TRAPPC3-204ENST00000373166 TYW5A2RUC4 315 aaKnown RBP19.79■□□□□ 0.76
TRAPPC3-204ENST00000373166 LGALS16A8MUM7 142 aa19.79■□□□□ 0.76
TRAPPC3-204ENST00000373166 ACSL4O60488 711 aa19.79■□□□□ 0.76
TRAPPC3-204ENST00000373166 IGLV3-27P01718 113 aa19.79■□□□□ 0.76
TRAPPC3-204ENST00000373166 PTMSP20962 102 aa19.79■□□□□ 0.76
TRAPPC3-204ENST00000373166 EPHA8P29322 1005 aaPredicted RBP19.79■□□□□ 0.76
TRAPPC3-204ENST00000373166 SLC8A1P32418 973 aa19.79■□□□□ 0.76
TRAPPC3-204ENST00000373166 CSKP41240 450 aa19.79■□□□□ 0.76
TRAPPC3-204ENST00000373166 ILKQ13418 452 aa19.79■□□□□ 0.76
TRAPPC3-204ENST00000373166 FAM133BQ5BKY9 247 aaKnown RBP19.79■□□□□ 0.76
TRAPPC3-204ENST00000373166 C9orf64Q5T6V5 341 aa19.79■□□□□ 0.76
TRAPPC3-204ENST00000373166 BEND5Q7L4P6 421 aa19.79■□□□□ 0.76
TRAPPC3-204ENST00000373166 OXR1Q8N573 874 aa19.79■□□□□ 0.76
TRAPPC3-204ENST00000373166 HJURPQ8NCD3 748 aaPredicted RBP19.79■□□□□ 0.76
TRAPPC3-204ENST00000373166 SNIP1Q8TAD8 396 aaKnown RBP19.79■□□□□ 0.76
TRAPPC3-204ENST00000373166 DQX1Q8TE96 717 aaKnown RBP19.79■□□□□ 0.76
TRAPPC3-204ENST00000373166 AZIN2Q96A70 460 aa19.79■□□□□ 0.76
TRAPPC3-204ENST00000373166 SERAC1Q96JX3 654 aa19.79■□□□□ 0.76
TRAPPC3-204ENST00000373166 PPP1R13BQ96KQ4 1090 aa19.79■□□□□ 0.76
TRAPPC3-204ENST00000373166 LMLNQ96KR4 655 aa19.79■□□□□ 0.76
TRAPPC3-204ENST00000373166 CPXM1Q96SM3 734 aa19.79■□□□□ 0.76
TRAPPC3-204ENST00000373166 BPIFA3Q9BQP9 254 aa19.79■□□□□ 0.76
TRAPPC3-204ENST00000373166 GANQ9H2C0 597 aa19.79■□□□□ 0.76
TRAPPC3-204ENST00000373166 SYNCQ9H7C4 482 aa19.79■□□□□ 0.76
TRAPPC3-204ENST00000373166 POPDC2Q9HBU9 364 aa19.79■□□□□ 0.76
TRAPPC3-204ENST00000373166 MUC22E2RYF6 1773 aaPredicted RBP19.78■□□□□ 0.76
TRAPPC3-204ENST00000373166 TLR4O00206 839 aa19.78■□□□□ 0.76
TRAPPC3-204ENST00000373166 CYP11B1P15538 503 aa19.78■□□□□ 0.76
TRAPPC3-204ENST00000373166 ZNF18P17022 549 aa19.78■□□□□ 0.76
TRAPPC3-204ENST00000373166 GOT1P17174 413 aa19.78■□□□□ 0.76
TRAPPC3-204ENST00000373166 SLC6A4P31645 630 aa19.78■□□□□ 0.76
TRAPPC3-204ENST00000373166 TBX4P57082 545 aa19.78■□□□□ 0.76
TRAPPC3-204ENST00000373166 NCAPHQ15003 741 aa19.78■□□□□ 0.76
TRAPPC3-204ENST00000373166 KLHL40Q2TBA0 621 aa19.78■□□□□ 0.76
TRAPPC3-204ENST00000373166 SND1Q7KZF4 910 aaKnown RBP eCLIP19.78■□□□□ 0.76
TRAPPC3-204ENST00000373166 ZNF605Q86T29 641 aa19.78■□□□□ 0.76
TRAPPC3-204ENST00000373166 FGF11Q92914 225 aa19.78■□□□□ 0.76
TRAPPC3-204ENST00000373166 MRGPRX3Q96LB0 322 aa19.78■□□□□ 0.76
TRAPPC3-204ENST00000373166 ERVMER34-1Q9H9K5 563 aa19.78■□□□□ 0.76
TRAPPC3-204ENST00000373166 NAALADL1Q9UQQ1 740 aa19.78■□□□□ 0.76
TRAPPC3-204ENST00000373166 COL5A1P20908 1838 aaPredicted RBP19.78■□□□□ 0.76
TRAPPC3-204ENST00000373166 TMEM131Q92545 1883 aa19.77■□□□□ 0.76
TRAPPC3-204ENST00000373166 EDDM13A0A1B0GTR0 161 aa19.77■□□□□ 0.76
TRAPPC3-204ENST00000373166 SMTNL1A8MU46 457 aa19.77■□□□□ 0.76
TRAPPC3-204ENST00000373166 WNT9AO14904 365 aa19.77■□□□□ 0.76
TRAPPC3-204ENST00000373166 FYNP06241 537 aa19.77■□□□□ 0.76
TRAPPC3-204ENST00000373166 SRPRAP08240 638 aaKnown RBP19.77■□□□□ 0.76
TRAPPC3-204ENST00000373166 CKMT2P17540 419 aa19.77■□□□□ 0.76
TRAPPC3-204ENST00000373166 RXRGP48443 463 aa19.77■□□□□ 0.76
TRAPPC3-204ENST00000373166 KLK7P49862 253 aa19.77■□□□□ 0.76
TRAPPC3-204ENST00000373166 NXPH1P58417 271 aa19.77■□□□□ 0.76
TRAPPC3-204ENST00000373166 POLR2FP61218 127 aaKnown RBP19.77■□□□□ 0.76
TRAPPC3-204ENST00000373166 YWHAZP63104 245 aaKnown RBP19.77■□□□□ 0.76
TRAPPC3-204ENST00000373166 UBXN1Q04323 297 aa19.77■□□□□ 0.76
TRAPPC3-204ENST00000373166 BNIP3Q12983 259 aa19.77■□□□□ 0.76
TRAPPC3-204ENST00000373166 NNTQ13423 1086 aa19.77■□□□□ 0.76
TRAPPC3-204ENST00000373166 CDH18Q13634 790 aa19.77■□□□□ 0.76
TRAPPC3-204ENST00000373166 SYCP1Q15431 976 aa19.77■□□□□ 0.76
TRAPPC3-204ENST00000373166 GPR155Q7Z3F1 870 aa19.77■□□□□ 0.76
TRAPPC3-204ENST00000373166 TAC4Q86UU9 113 aa19.77■□□□□ 0.76
TRAPPC3-204ENST00000373166 CACTIN-AS1Q8N1I8 211 aa19.77■□□□□ 0.76
TRAPPC3-204ENST00000373166 CARNMT1Q8N4J0 409 aa19.77■□□□□ 0.76
TRAPPC3-204ENST00000373166 WDTC1Q8N5D0 677 aa19.77■□□□□ 0.76
TRAPPC3-204ENST00000373166 TMEM35BQ8NCS4 154 aa19.77■□□□□ 0.76
TRAPPC3-204ENST00000373166 OR14C36Q8NHC7 312 aa19.77■□□□□ 0.76
TRAPPC3-204ENST00000373166 SPAG5Q96R06 1193 aa19.77■□□□□ 0.76
TRAPPC3-204ENST00000373166 TJP2Q9UDY2 1190 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms