RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 MLLT6P55198 1093 aaPredicted RBP13.68□□□□□ -0.22
CSTF2-201ENST00000372972 CCL23P55773 120 aa13.68□□□□□ -0.22
CSTF2-201ENST00000372972 OVGP1Q12889 678 aa13.68□□□□□ -0.22
CSTF2-201ENST00000372972 FRG1Q14331 258 aaKnown RBP13.68□□□□□ -0.22
CSTF2-201ENST00000372972 CTXN3Q4LDR2 81 aa13.68□□□□□ -0.22
CSTF2-201ENST00000372972 STXBP5Q5T5C0 1151 aa13.68□□□□□ -0.22
CSTF2-201ENST00000372972 CYB5D1Q6P9G0 228 aa13.68□□□□□ -0.22
CSTF2-201ENST00000372972 RASSF3Q86WH2 238 aa13.68□□□□□ -0.22
CSTF2-201ENST00000372972 ARHGAP12Q8IWW6 846 aa13.68□□□□□ -0.22
CSTF2-201ENST00000372972 ATPAF2Q8N5M1 289 aa13.68□□□□□ -0.22
CSTF2-201ENST00000372972 CNTD1Q8N815 330 aa13.68□□□□□ -0.22
CSTF2-201ENST00000372972 C1orf74Q96LT6 269 aa13.68□□□□□ -0.22
CSTF2-201ENST00000372972 CRISPLD2Q9H0B8 497 aa13.68□□□□□ -0.22
CSTF2-201ENST00000372972 HIPK3Q9H422 1215 aa13.68□□□□□ -0.22
CSTF2-201ENST00000372972 OSER1Q9NX31 292 aa13.68□□□□□ -0.22
CSTF2-201ENST00000372972 SLC17A6Q9P2U8 582 aa13.68□□□□□ -0.22
CSTF2-201ENST00000372972 ADAM28Q9UKQ2 775 aa13.68□□□□□ -0.22
CSTF2-201ENST00000372972 PATJQ8NI35 1801 aa13.68□□□□□ -0.22
CSTF2-201ENST00000372972 FAM237BA0A1B0GVD1 139 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 BIRC5O15392 142 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 ATP5HO75947 161 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 ITGA2BP08514 1039 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 SLC2A3P11169 496 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 DNAJB2P25686 324 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 GP5P40197 560 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 GPR15P49685 360 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 GATMP50440 423 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 TUBP50607 506 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 NRG1Q02297 640 aaPredicted RBP13.67□□□□□ -0.22
CSTF2-201ENST00000372972 TLE2Q04725 743 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 MRPL58Q14197 206 aaKnown RBP13.67□□□□□ -0.22
CSTF2-201ENST00000372972 TRIM60Q495X7 471 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 ANKRD20A4Q4UJ75 823 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 ARTNQ5T4W7 220 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 GRTP1Q5TC63 336 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 FAM171A1Q5VUB5 890 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 SDHAF4Q5VUM1 108 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 ATG16L1Q676U5 607 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 NAPEPLDQ6IQ20 393 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 MSANTD2Q6P1R3 559 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 KYAT3Q6YP21 454 aaKnown RBP13.67□□□□□ -0.22
CSTF2-201ENST00000372972 NLRP9Q7RTR0 991 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 TBC1D1Q86TI0 1168 aaPredicted RBP13.67□□□□□ -0.22
CSTF2-201ENST00000372972 LINC00523Q86TU6 105 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 CEP57Q86XR8 500 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 KLHDC8BQ8IXV7 354 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.67□□□□□ -0.22
CSTF2-201ENST00000372972 STKLD1Q8NE28 680 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 ZNF669Q96BR6 464 aaPredicted RBP13.67□□□□□ -0.22
CSTF2-201ENST00000372972 KLHL29Q96CT2 875 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 ERP27Q96DN0 273 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 CPNE1Q99829 537 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 PPP1R12CQ9BZL4 782 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 SLC39A8Q9C0K1 460 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 IL22Q9GZX6 179 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 SIRPGQ9P1W8 387 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 TLR6Q9Y2C9 796 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 AAR2Q9Y312 384 aaKnown RBP13.67□□□□□ -0.22
CSTF2-201ENST00000372972 PSAT1Q9Y617 370 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 HS3ST4Q9Y661 456 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 OR6C75A6NL08 312 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 E9PAM4 449 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 MATN3O15232 486 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 MAFKO60675 156 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 UNC5CO95185 931 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 MOCS2O96007 188 aaPredicted RBP13.67□□□□□ -0.22
CSTF2-201ENST00000372972 ALDOAP04075 364 aaKnown RBP13.67□□□□□ -0.22
CSTF2-201ENST00000372972 ALDH2P05091 517 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 KCNA4P22459 653 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 ELF3P78545 371 aaPredicted RBP13.67□□□□□ -0.22
CSTF2-201ENST00000372972 PDE1BQ01064 536 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 CDH17Q12864 832 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 CERCAMQ5T4B2 595 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 ARHGAP36Q6ZRI8 547 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 OTOP3Q7RTS5 596 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 NUDCD3Q8IVD9 361 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 RFWD2Q8NHY2 731 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 RAB3IL1Q8TBN0 382 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 USP33Q8TEY7 942 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 ATP2A3Q93084 1043 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 E2F7Q96AV8 911 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 CASD1Q96PB1 797 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 PGLYRP2Q96PD5 576 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 TXLNGQ9NUQ3 528 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 IL37Q9NZH6 218 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 UBP1Q9NZI7 540 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 DCDC2Q9UHG0 476 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 DCTN4Q9UJW0 460 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 LRFN2Q9ULH4 789 aa13.67□□□□□ -0.22
CSTF2-201ENST00000372972 ZCWPW2A0A1B0GU75 182 aa13.66□□□□□ -0.22
CSTF2-201ENST00000372972 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.66□□□□□ -0.22
CSTF2-201ENST00000372972 TPP1O14773 563 aa13.66□□□□□ -0.22
CSTF2-201ENST00000372972 ATP9BO43861 1147 aa13.66□□□□□ -0.22
CSTF2-201ENST00000372972 NQO1P15559 274 aaKnown RBP13.66□□□□□ -0.22
CSTF2-201ENST00000372972 SPDYAQ5MJ70 313 aa13.66□□□□□ -0.22
CSTF2-201ENST00000372972 ZNF280DQ6N043 979 aa13.66□□□□□ -0.22
CSTF2-201ENST00000372972 ASRGL1Q7L266 308 aa13.66□□□□□ -0.22
CSTF2-201ENST00000372972 LRRC49Q8IUZ0 686 aa13.66□□□□□ -0.22
CSTF2-201ENST00000372972 RTL3Q8N8U3 475 aaKnown RBP13.66□□□□□ -0.22
CSTF2-201ENST00000372972 ATAD1Q8NBU5 361 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms