RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 PPM1KQ8N3J5 372 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 LMO3Q8TAP4 145 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 CHAC2Q8WUX2 184 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 ISOC1Q96CN7 298 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 ATG4CQ96DT6 458 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 C17orf80Q9BSJ5 609 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 THTPAQ9BU02 230 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 C1orf21Q9H246 121 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 ST6GALNAC4Q9H4F1 302 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 PCIF1Q9H4Z3 704 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 RUBCNLQ9H714 662 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 ATPIF1Q9UII2 106 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 AMFRQ9UKV5 643 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 ATP11BQ9Y2G3 1177 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 COMMD10Q9Y6G5 202 aa9.05□□□□□ -0.96
ATG4A-203ENST00000372232 CAPN14A8MX76 684 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 WDR64B1ANS9 1081 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 FCHO1O14526 889 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 MYO1DO94832 1006 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 FGFR1P11362 822 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 KRT13P13646 458 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 SFNP31947 248 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 BMPR1AP36894 532 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 ADCY8P40145 1251 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 YWHAGP61981 247 aaKnown RBP eCLIP9.04□□□□□ -0.96
ATG4A-203ENST00000372232 ZBTB16Q05516 673 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 RALGDSQ12967 914 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 BAATQ14032 418 aaPredicted RBP9.04□□□□□ -0.96
ATG4A-203ENST00000372232 CCNIQ14094 377 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 DCAF15Q66K64 600 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 KIAA1841Q6NSI8 718 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 XRRA1Q6P2D8 792 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 TRABD2AQ86V40 505 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 VSIG10LQ86VR7 867 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 CCDC25Q86WR0 208 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 SLC25A41Q8N5S1 370 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 TRIML2Q8N7C3 387 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 LNX1Q8TBB1 728 aaPredicted RBP9.04□□□□□ -0.96
ATG4A-203ENST00000372232 CAPSLQ8WWF8 208 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 C12orf43Q96C57 262 aaKnown RBP9.04□□□□□ -0.96
ATG4A-203ENST00000372232 C18orf8Q96DM3 657 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 ERLEC1Q96DZ1 483 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 SUSD3Q96L08 255 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 CNBD2Q96M20 576 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 VPS35Q96QK1 796 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 SMAD5Q99717 465 aaKnown RBP9.04□□□□□ -0.96
ATG4A-203ENST00000372232 CBWD1Q9BRT8 395 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 SYT11Q9BT88 431 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 TP63Q9H3D4 680 aaPredicted RBP9.04□□□□□ -0.96
ATG4A-203ENST00000372232 GPRC5CQ9NQ84 441 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 FBXO6Q9NRD1 293 aaPredicted RBP9.04□□□□□ -0.96
ATG4A-203ENST00000372232 RNF146Q9NTX7 359 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 EBF1Q9UH73 591 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 ZNF112Q9UJU3 913 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 SPEF1Q9Y4P9 236 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 CPQQ9Y646 472 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 GJA3Q9Y6H8 435 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 GOLGA8IPA6NC78 632 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 FAM172BPA6NC97 362 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 FZD9O00144 591 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 CCNT2O60583 730 aaKnown RBP9.04□□□□□ -0.96
ATG4A-203ENST00000372232 PTPRAP18433 802 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 ALDH1A3P47895 512 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 HSPA13P48723 471 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 VAMP7P51809 220 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 CLN3Q13286 438 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 OASLQ15646 514 aaKnown RBP9.04□□□□□ -0.96
ATG4A-203ENST00000372232 DGKDQ16760 1214 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 KLHL38Q2WGJ6 581 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 SCARA3Q6AZY7 606 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 RHBDF2Q6PJF5 856 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 C6orf15Q6UXA7 325 aaPredicted RBP9.04□□□□□ -0.96
ATG4A-203ENST00000372232 ISLR2Q6UXK2 745 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 RALGPS2Q86X27 583 aaPredicted RBP9.04□□□□□ -0.96
ATG4A-203ENST00000372232 GSTCDQ8NEC7 633 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 REPS2Q8NFH8 660 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 NPLOC4Q8TAT6 608 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 ATP2A3Q93084 1043 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 GIMAP5Q96F15 307 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 RBM15Q96T37 977 aaKnown RBP eCLIP9.04□□□□□ -0.96
ATG4A-203ENST00000372232 MRPL9Q9BYD2 267 aaKnown RBP9.04□□□□□ -0.96
ATG4A-203ENST00000372232 RSPH9Q9H1X1 276 aaPredicted RBP9.04□□□□□ -0.96
ATG4A-203ENST00000372232 KCNK13Q9HB14 408 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 ARNT2Q9HBZ2 717 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 ANKEF1Q9NU02 776 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 MOCS1Q9NZB8 636 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 HSPBP1Q9NZL4 362 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 PCSK1NQ9UHG2 260 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 ZMYM5Q9UJ78 669 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 CFL2Q9Y281 166 aa9.04□□□□□ -0.96
ATG4A-203ENST00000372232 A0A0G2JND7 137 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 TRIM64BA6NI03 449 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 A8MU76 341 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 ANKRD63C9JTQ0 380 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 SLC16A4O15374 487 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 HOXC11O43248 304 aaPredicted RBP9.03□□□□□ -0.96
ATG4A-203ENST00000372232 GMNNO75496 209 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 SEC24DO94855 1032 aaPredicted RBP9.03□□□□□ -0.96
ATG4A-203ENST00000372232 BMP10O95393 424 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms