RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 IL18RAPO95256 599 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 TDP2O95551 362 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 FGFR2P21802 821 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 PSMD5Q16401 504 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.51■□□□□ 0.07
COL5A1-201ENST00000371817 SGMS1Q86VZ5 419 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 PALB2Q86YC2 1186 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 ADGRF4Q8IZF3 695 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 S100PBPQ96BU1 408 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 INTS10Q9NVR2 710 aaKnown RBP15.51■□□□□ 0.07
COL5A1-201ENST00000371817 PDE4DIPQ5VU43 2346 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 TGM3Q08188 693 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 EZH2Q15910 746 aaKnown RBP15.51■□□□□ 0.07
COL5A1-201ENST00000371817 R3HCC1LQ7Z5L2 792 aaKnown RBP15.51■□□□□ 0.07
COL5A1-201ENST00000371817 PHF10Q8WUB8 498 aaKnown RBP15.51■□□□□ 0.07
COL5A1-201ENST00000371817 VPS35Q96QK1 796 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 RNF38Q9H0F5 515 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 IFRD1O00458 451 aaPredicted RBP15.51■□□□□ 0.07
COL5A1-201ENST00000371817 PSMA1P25786 263 aaKnown RBP15.51■□□□□ 0.07
COL5A1-201ENST00000371817 ETFBP38117 255 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 MCAMP43121 646 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 C12orf56Q8IXR9 622 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 FBXO30Q8TB52 745 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 HDAC2Q92769 488 aaKnown RBP15.51■□□□□ 0.07
COL5A1-201ENST00000371817 GMCL1Q96IK5 515 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 ZNF304Q9HCX3 659 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 DYRK1BQ9Y463 629 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 NEDD1Q8NHV4 660 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 EXD2Q9NVH0 621 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 A2MP01023 1474 aa15.51■□□□□ 0.07
COL5A1-201ENST00000371817 PRODHO43272 600 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 NDUFB5O43674 189 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 GLP2RO95838 553 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 CPB1P15086 417 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 DNAAF2Q9NVR5 837 aaKnown RBP15.5■□□□□ 0.07
COL5A1-201ENST00000371817 GDI2P50395 445 aaKnown RBP15.5■□□□□ 0.07
COL5A1-201ENST00000371817 SCNN1BP51168 640 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 CARTPTQ16568 116 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 FAM153CQ494X1 144 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 LIN52Q52LA3 116 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 MB21D2Q8IYB1 491 aaPredicted RBP15.5■□□□□ 0.07
COL5A1-201ENST00000371817 FEM1BQ9UK73 627 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 PNMA3Q9UL41 463 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 RABL2BQ9UNT1 228 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 CCDC88CQ9P219 2028 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 BIVM-ERCC5R4GMW8 1640 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 PRAMEF33A0A0G2JMD5 474 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 PRAMEF10O60809 474 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 C9P02748 559 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 SERPINA6P08185 405 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 SNRPB2P08579 225 aaKnown RBP15.5■□□□□ 0.07
COL5A1-201ENST00000371817 HERVK_113P62684 666 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 PARP6Q2NL67 630 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 STN1Q9H668 368 aaKnown RBP15.5■□□□□ 0.07
COL5A1-201ENST00000371817 LRIG2O94898 1065 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 ALDH9A1P49189 494 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 TPTEP56180 551 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 FAM47BQ8NA70 645 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 TBCDQ9BTW9 1192 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 GRHL1Q9NZI5 618 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 FAM50BQ9Y247 325 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 AKAP8O43823 692 aaKnown RBP15.5■□□□□ 0.07
COL5A1-201ENST00000371817 PAX3P23760 479 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 PON1P27169 355 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 CDK9P50750 372 aaKnown RBP15.5■□□□□ 0.07
COL5A1-201ENST00000371817 INTS11Q5TA45 600 aaKnown RBP15.5■□□□□ 0.07
COL5A1-201ENST00000371817 ACSF2Q96CM8 615 aaPredicted RBP15.5■□□□□ 0.07
COL5A1-201ENST00000371817 GDF3Q9NR23 364 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 HPF1Q9NWY4 346 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 REXO2Q9Y3B8 237 aaKnown RBP15.5■□□□□ 0.07
COL5A1-201ENST00000371817 IRGMA1A4Y4 181 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 RGS14O43566 566 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 CRTAMO95727 393 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 CST1P01037 141 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 HLA-DQA2P01906 255 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 PRH1P02810 166 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 ITGA2P17301 1181 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 MUTP22033 750 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 TNFRSF8P28908 595 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 GALNT15Q8N3T1 639 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 FAM136AQ96C01 138 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 JPH1Q9HDC5 661 aaPredicted RBP15.5■□□□□ 0.07
COL5A1-201ENST00000371817 LSM7Q9UK45 103 aaKnown RBP15.5■□□□□ 0.07
COL5A1-201ENST00000371817 ASB14A6NK59 587 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 SMIM22K7EJ46 135 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 PRKD3O94806 890 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 NPTXRO95502 500 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 STAU1O95793 577 aaKnown RBP15.5■□□□□ 0.07
COL5A1-201ENST00000371817 BNIP2Q12982 314 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 ARMC6Q6NXE6 501 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 DSG4Q86SJ6 1040 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 OOSP2Q86WS3 158 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 TCF12Q99081 682 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 WDCPQ9H6R7 721 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 VPS45Q9NRW7 570 aa15.5■□□□□ 0.07
COL5A1-201ENST00000371817 I3L521 148 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 HNF4AP41235 474 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 GPR15P49685 360 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 ARMC8Q8IUR7 673 aa15.49■□□□□ 0.07
COL5A1-201ENST00000371817 PHC2Q8IXK0 858 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms