RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 TMEM215Q68D42 235 aa15.93■□□□□ 0.14
PRPF38B-202ENST00000370022 FBXL6Q8N531 539 aa15.93■□□□□ 0.14
PRPF38B-202ENST00000370022 DCAF4L2Q8NA75 395 aa15.93■□□□□ 0.14
PRPF38B-202ENST00000370022 OR52K2Q8NGK3 314 aa15.93■□□□□ 0.14
PRPF38B-202ENST00000370022 KRT35Q92764 455 aa15.93■□□□□ 0.14
PRPF38B-202ENST00000370022 ALG14Q96F25 216 aa15.93■□□□□ 0.14
PRPF38B-202ENST00000370022 MAK16Q9BXY0 300 aaKnown RBP15.93■□□□□ 0.14
PRPF38B-202ENST00000370022 TRMT1Q9NXH9 659 aaKnown RBP15.93■□□□□ 0.14
PRPF38B-202ENST00000370022 INTS6Q9UL03 887 aaKnown RBP15.93■□□□□ 0.14
PRPF38B-202ENST00000370022 PLA2G4CQ9UP65 541 aa15.93■□□□□ 0.14
PRPF38B-202ENST00000370022 TECTAO75443 2155 aa15.93■□□□□ 0.14
PRPF38B-202ENST00000370022 DOCK4Q8N1I0 1966 aa15.93■□□□□ 0.14
PRPF38B-202ENST00000370022 F5P12259 2224 aa15.93■□□□□ 0.14
PRPF38B-202ENST00000370022 BDP1A6H8Y1 2624 aa15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 CHURC1-FNTBB4DL54 471 aa15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 KIF5CO60282 957 aa15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 DLDP09622 509 aaKnown RBP15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 AMPD1P23109 780 aa15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 MZF1P28698 734 aaPredicted RBP15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 CETN2P41208 172 aa15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 MMRN1Q13201 1228 aa15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 TAZQ16635 292 aa15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 TFDP3Q5H9I0 405 aa15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 APCDD1Q8J025 514 aa15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 ZNF513Q8N8E2 541 aaPredicted RBP15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 KDM1BQ8NB78 822 aa15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 PCDH19Q8TAB3 1148 aa15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 USP33Q8TEY7 942 aa15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 ARHGEF2Q92974 986 aaKnown RBP15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 RNF25Q96BH1 459 aaPredicted RBP15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 TRIM44Q96DX7 344 aaPredicted RBP15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 RNF157Q96PX1 679 aa15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 CHRDQ9H2X0 955 aa15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 RBM12Q9NTZ6 932 aaKnown RBP15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 A0A0D9SEW6 157 aa15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 PRR33A8MZF0 331 aa15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 SRPRAP08240 638 aaKnown RBP15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 ZFXP17010 805 aaPredicted RBP15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 CDKN2BP42772 138 aa15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 MARCKSL1P49006 195 aa15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 VASPP50552 380 aaPredicted RBP15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 SEC13P55735 322 aa15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 ECT2LQ008S8 904 aa15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 PPP2R5EQ16537 467 aa15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 MEI1Q5TIA1 1274 aa15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 AFMIDQ63HM1 303 aa15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 IL31Q6EBC2 164 aa15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 SPOCD1Q6ZMY3 1216 aa15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 CCDC50Q8IVM0 306 aa15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 SFTPA1Q8IWL2 248 aa15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 ACE2Q9BYF1 805 aaPredicted RBP15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 LRRC19Q9H756 370 aa15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 ATP13A1Q9HD20 1204 aa15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 DLGAP2Q9P1A6 1054 aa15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 THAP10Q9P2Z0 257 aaPredicted RBP15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 HPCAL4Q9UM19 191 aa15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 EFR3BQ9Y2G0 817 aa15.92■□□□□ 0.14
PRPF38B-202ENST00000370022 MIA3Q5JRA6 1907 aa15.91■□□□□ 0.14
PRPF38B-202ENST00000370022 ARHGAP42A6NI28 874 aa15.91■□□□□ 0.14
PRPF38B-202ENST00000370022 PTPN7P35236 360 aa15.91■□□□□ 0.14
PRPF38B-202ENST00000370022 NNMTP40261 264 aa15.91■□□□□ 0.14
PRPF38B-202ENST00000370022 TFDP2Q14188 446 aa15.91■□□□□ 0.14
PRPF38B-202ENST00000370022 PAFAH1B3Q15102 231 aaKnown RBP15.91■□□□□ 0.14
PRPF38B-202ENST00000370022 RPS6KA1Q15418 735 aa15.91■□□□□ 0.14
PRPF38B-202ENST00000370022 C2orf27AQ580R0 203 aa15.91■□□□□ 0.14
PRPF38B-202ENST00000370022 SLC9A4Q6AI14 798 aa15.91■□□□□ 0.14
PRPF38B-202ENST00000370022 SDE2Q6IQ49 451 aa15.91■□□□□ 0.14
PRPF38B-202ENST00000370022 RETSATQ6NUM9 610 aa15.91■□□□□ 0.14
PRPF38B-202ENST00000370022 MFSD7Q6UXD7 560 aa15.91■□□□□ 0.14
PRPF38B-202ENST00000370022 MAMSTRQ6ZN01 415 aa15.91■□□□□ 0.14
PRPF38B-202ENST00000370022 RPLP0P6Q8NHW5 317 aa15.91■□□□□ 0.14
PRPF38B-202ENST00000370022 SPON2Q9BUD6 331 aa15.91■□□□□ 0.14
PRPF38B-202ENST00000370022 KLC2Q9H0B6 622 aa15.91■□□□□ 0.14
PRPF38B-202ENST00000370022 NOL6Q9H6R4 1146 aaKnown RBP15.91■□□□□ 0.14
PRPF38B-202ENST00000370022 SLC25A13Q9UJS0 675 aa15.91■□□□□ 0.14
PRPF38B-202ENST00000370022 PACSIN2Q9UNF0 486 aaPredicted RBP15.91■□□□□ 0.14
PRPF38B-202ENST00000370022 JRKLQ9Y4A0 524 aa15.91■□□□□ 0.14
PRPF38B-202ENST00000370022 ZSCAN5CA6NGD5 496 aaPredicted RBP15.9■□□□□ 0.14
PRPF38B-202ENST00000370022 RASA4BC9J798 803 aa15.9■□□□□ 0.14
PRPF38B-202ENST00000370022 DDX3YO15523 660 aaKnown RBP15.9■□□□□ 0.14
PRPF38B-202ENST00000370022 RASA4O43374 803 aa15.9■□□□□ 0.14
PRPF38B-202ENST00000370022 PI15O43692 258 aa15.9■□□□□ 0.14
PRPF38B-202ENST00000370022 DCNP07585 359 aaKnown RBP15.9■□□□□ 0.14
PRPF38B-202ENST00000370022 CHRM1P11229 460 aaPredicted RBP15.9■□□□□ 0.14
PRPF38B-202ENST00000370022 TIE1P35590 1138 aa15.9■□□□□ 0.14
PRPF38B-202ENST00000370022 GEMIN4P57678 1058 aaKnown RBP15.9■□□□□ 0.14
PRPF38B-202ENST00000370022 ST8SIA6P61647 398 aa15.9■□□□□ 0.14
PRPF38B-202ENST00000370022 SLC20A2Q08357 652 aa15.9■□□□□ 0.14
PRPF38B-202ENST00000370022 ENPP2Q13822 863 aa15.9■□□□□ 0.14
PRPF38B-202ENST00000370022 PTPRNQ16849 979 aa15.9■□□□□ 0.14
PRPF38B-202ENST00000370022 TMEM31Q5JXX7 168 aa15.9■□□□□ 0.14
PRPF38B-202ENST00000370022 EOGTQ5NDL2 527 aa15.9■□□□□ 0.14
PRPF38B-202ENST00000370022 EGFLAMQ63HQ2 1017 aa15.9■□□□□ 0.14
PRPF38B-202ENST00000370022 NCBP2-AS2Q69YL0 99 aa15.9■□□□□ 0.14
PRPF38B-202ENST00000370022 Q6ZS52 159 aa15.9■□□□□ 0.14
PRPF38B-202ENST00000370022 LRRC49Q8IUZ0 686 aa15.9■□□□□ 0.14
PRPF38B-202ENST00000370022 CHPFQ8IZ52 775 aa15.9■□□□□ 0.14
PRPF38B-202ENST00000370022 SPEM1Q8N4L4 309 aa15.9■□□□□ 0.14
PRPF38B-202ENST00000370022 NPWQ8N729 165 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms