RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 HIPK3Q9H422 1215 aa12.52□□□□□ -0.4
PTPRK-203ENST00000368207 SYNDIG1Q9H7V2 258 aa12.52□□□□□ -0.4
PTPRK-203ENST00000368207 MINDY3Q9H8M7 445 aa12.52□□□□□ -0.4
PTPRK-203ENST00000368207 FBXO6Q9NRD1 293 aaPredicted RBP12.52□□□□□ -0.4
PTPRK-203ENST00000368207 SLCO1B7G3V0H7 640 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 UBDO15205 165 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 PAPSS1O43252 624 aaPredicted RBP12.52□□□□□ -0.41
PTPRK-203ENST00000368207 CCNT2O60583 730 aaKnown RBP12.52□□□□□ -0.41
PTPRK-203ENST00000368207 BAIAP3O94812 1187 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 VNN1O95497 513 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 NUDT17P0C025 328 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 SP100P23497 879 aaPredicted RBP12.52□□□□□ -0.41
PTPRK-203ENST00000368207 CRABP2P29373 138 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 HALP42357 657 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 ARHGAP1Q07960 439 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 FSTL1Q12841 308 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 TARBP2Q15633 366 aaKnown RBP12.52□□□□□ -0.41
PTPRK-203ENST00000368207 HIST2H2ACQ16777 129 aaPredicted RBP12.52□□□□□ -0.41
PTPRK-203ENST00000368207 CACHD1Q5VU97 1274 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 HIST2H2AA3Q6FI13 130 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 TTC27Q6P3X3 843 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 SLC24A5Q71RS6 500 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 STRADAQ7RTN6 431 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 IQCKQ8N0W5 287 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 CYGBQ8WWM9 190 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 KLHL5Q96PQ7 755 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 FAM32AQ9Y421 112 aaKnown RBP12.52□□□□□ -0.41
PTPRK-203ENST00000368207 SCN11AQ9UI33 1791 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 RPTORQ8N122 1335 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 IGSF6O95976 241 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 CSH1P0DML2 217 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 CSH2P0DML3 217 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 ZNF7P17097 686 aaPredicted RBP12.52□□□□□ -0.41
PTPRK-203ENST00000368207 LMO2P25791 158 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 KLC1Q07866 573 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 CAPNS2Q96L46 248 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 IGFLR1Q9H665 355 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 PCDH8O95206 1070 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 SPATA31D3P0C874 917 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 NOMO1Q15155 1222 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 SPATA31D4Q6ZUB0 917 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 MON1AQ86VX9 555 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 CKAP2Q8WWK9 683 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 NAF1Q96HR8 494 aaKnown RBP12.52□□□□□ -0.41
PTPRK-203ENST00000368207 MAF1Q9H063 256 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 NEUROG2Q9H2A3 272 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 ACSS3Q9H6R3 686 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.52□□□□□ -0.411e-6■■□□□ 12.2
PTPRK-203ENST00000368207 DPP7Q9UHL4 492 aa12.52□□□□□ -0.41
PTPRK-203ENST00000368207 TCRBV9S1A1TA0A576 114 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 BTN3A1O00481 513 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 RNASEH1O60930 286 aaKnown RBP12.51□□□□□ -0.41
PTPRK-203ENST00000368207 PAGE1O75459 146 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 EPB42P16452 691 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 PTPN4P29074 926 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 PRKCZQ05513 592 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 TAF10Q12962 218 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 KRT72Q14CN4 511 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 BNC2Q6ZN30 1099 aaPredicted RBP12.51□□□□□ -0.41
PTPRK-203ENST00000368207 SLC22A9Q8IVM8 553 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 DEFB107AQ8IZN7 70 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 RNF148Q8N7C7 305 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 TEPSINQ96N21 525 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 PRPF18Q99633 342 aaKnown RBP12.51□□□□□ -0.41
PTPRK-203ENST00000368207 C2orf49Q9BVC5 232 aaPredicted RBP12.51□□□□□ -0.41
PTPRK-203ENST00000368207 MID1IP1Q9NPA3 183 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 PCDHGC3Q9UN70 934 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 SOX13Q9UN79 622 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 VIRMAQ69YN4 1812 aaKnown RBP12.51□□□□□ -0.41
PTPRK-203ENST00000368207 MYBPHLA2RUH7 354 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 SEPT4O43236 478 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 DCXO43602 365 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 PIGNO95427 931 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 CDKN2BP42772 138 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 MTA1Q13330 715 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 STARD3Q14849 445 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 AASDHQ4L235 1098 aaPredicted RBP12.51□□□□□ -0.41
PTPRK-203ENST00000368207 CAPRIN2Q6IMN6 1127 aaKnown RBP12.51□□□□□ -0.41
PTPRK-203ENST00000368207 CFAP52Q8N1V2 620 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 LPIN3Q9BQK8 851 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 SLC7A5P2Q9GIP4 190 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 ELOVL6Q9H5J4 265 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 TRIM45Q9H8W5 580 aaPredicted RBP12.51□□□□□ -0.41
PTPRK-203ENST00000368207 PRDM16Q9HAZ2 1276 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 STXBP5LQ9Y2K9 1186 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 ALOX15BO15296 676 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 CYP1A1P04798 512 aaPredicted RBP12.51□□□□□ -0.41
PTPRK-203ENST00000368207 PSEN1P49768 467 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 NFYCQ13952 458 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 PLD5Q8N7P1 536 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 TEKT4Q8WW24 435 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 OXNAD1Q96HP4 312 aaPredicted RBP12.51□□□□□ -0.41
PTPRK-203ENST00000368207 SNX27Q96L92 541 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 SPATA16Q9BXB7 569 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 PIF1Q9H611 641 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 SLCO1B3Q9NPD5 702 aa12.51□□□□□ -0.41
PTPRK-203ENST00000368207 RGPD1P0DJD0 1748 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 A0A1W2PPM1 405 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 A0A1W2PQH9 124 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 XYLBO75191 536 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms