RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 NDRG1Q92597 394 aaKnown RBP15.15■□□□□ 0.02
VAMP4-202ENST00000367740 MYEOVQ96EZ4 313 aa15.15■□□□□ 0.02
VAMP4-202ENST00000367740 IFT43Q96FT9 208 aa15.15■□□□□ 0.02
VAMP4-202ENST00000367740 ADNPQ9H2P0 1102 aa15.15■□□□□ 0.02
VAMP4-202ENST00000367740 DNAJC28Q9NX36 388 aa15.15■□□□□ 0.02
VAMP4-202ENST00000367740 SARDHQ9UL12 918 aa15.15■□□□□ 0.02
VAMP4-202ENST00000367740 C2CD3Q4AC94 2353 aa15.14■□□□□ 0.01
VAMP4-202ENST00000367740 A0A087X0B3 334 aa15.14■□□□□ 0.01
VAMP4-202ENST00000367740 ASS1P00966 412 aaKnown RBP15.14■□□□□ 0.01
VAMP4-202ENST00000367740 UGT1A5P35504 534 aa15.14■□□□□ 0.01
VAMP4-202ENST00000367740 STK19P49842 368 aaPredicted RBP15.14■□□□□ 0.01
VAMP4-202ENST00000367740 TAS2R38P59533 333 aa15.14■□□□□ 0.01
VAMP4-202ENST00000367740 HNRNPKP61978 463 aaKnown RBP eCLIP15.14■□□□□ 0.01
VAMP4-202ENST00000367740 ECT2LQ008S8 904 aa15.14■□□□□ 0.01
VAMP4-202ENST00000367740 CNTN1Q12860 1018 aa15.14■□□□□ 0.01
VAMP4-202ENST00000367740 MORC3Q14149 939 aa15.14■□□□□ 0.01
VAMP4-202ENST00000367740 PM20D1Q6GTS8 502 aa15.14■□□□□ 0.01
VAMP4-202ENST00000367740 GCNT7Q6ZNI0 430 aa15.14■□□□□ 0.01
VAMP4-202ENST00000367740 PIGZQ86VD9 579 aa15.14■□□□□ 0.01
VAMP4-202ENST00000367740 JAMLQ86YT9 394 aa15.14■□□□□ 0.01
VAMP4-202ENST00000367740 KLK6Q92876 244 aa15.14■□□□□ 0.01
VAMP4-202ENST00000367740 RPL10LQ96L21 214 aaKnown RBP15.14■□□□□ 0.01
VAMP4-202ENST00000367740 IRX2Q9BZI1 471 aaPredicted RBP15.14■□□□□ 0.01
VAMP4-202ENST00000367740 PREBQ9HCU5 417 aa15.14■□□□□ 0.01
VAMP4-202ENST00000367740 NCKIPSDQ9NZQ3 722 aa15.14■□□□□ 0.01
VAMP4-202ENST00000367740 FBXO2Q9UK22 296 aaPredicted RBP15.14■□□□□ 0.01
VAMP4-202ENST00000367740 H3BQV1 296 aa15.13■□□□□ 0.01
VAMP4-202ENST00000367740 IRAK2O43187 625 aa15.13■□□□□ 0.01
VAMP4-202ENST00000367740 ZBED1O96006 694 aa15.13■□□□□ 0.01
VAMP4-202ENST00000367740 IGLV3-27P01718 113 aa15.13■□□□□ 0.01
VAMP4-202ENST00000367740 STAT6P42226 847 aa15.13■□□□□ 0.01
VAMP4-202ENST00000367740 TKTL1P51854 596 aa15.13■□□□□ 0.01
VAMP4-202ENST00000367740 ZACNQ401N2 412 aa15.13■□□□□ 0.01
VAMP4-202ENST00000367740 KMT5BQ4FZB7 885 aa15.13■□□□□ 0.01
VAMP4-202ENST00000367740 MANEAQ5SRI9 462 aa15.13■□□□□ 0.01
VAMP4-202ENST00000367740 NADSYN1Q6IA69 706 aa15.13■□□□□ 0.01
VAMP4-202ENST00000367740 B3GNT8Q7Z7M8 397 aa15.13■□□□□ 0.01
VAMP4-202ENST00000367740 NELFCDQ8IXH7 590 aa15.13■□□□□ 0.01
VAMP4-202ENST00000367740 C12orf56Q8IXR9 622 aa15.13■□□□□ 0.01
VAMP4-202ENST00000367740 CARNMT1Q8N4J0 409 aa15.13■□□□□ 0.01
VAMP4-202ENST00000367740 HJURPQ8NCD3 748 aaPredicted RBP15.13■□□□□ 0.01
VAMP4-202ENST00000367740 EDEM1Q92611 657 aa15.13■□□□□ 0.01
VAMP4-202ENST00000367740 TAF4BQ92750 862 aa15.13■□□□□ 0.01
VAMP4-202ENST00000367740 SPAG5Q96R06 1193 aa15.13■□□□□ 0.01
VAMP4-202ENST00000367740 ULBP1Q9BZM6 244 aa15.13■□□□□ 0.01
VAMP4-202ENST00000367740 GPR27Q9NS67 375 aa15.13■□□□□ 0.01
VAMP4-202ENST00000367740 RIOK3O14730 519 aaKnown RBP15.12■□□□□ 0.01
VAMP4-202ENST00000367740 MUSKO15146 869 aa15.12■□□□□ 0.01
VAMP4-202ENST00000367740 EXOC3O60645 756 aa15.12■□□□□ 0.01
VAMP4-202ENST00000367740 HGFP14210 728 aa15.12■□□□□ 0.01
VAMP4-202ENST00000367740 CD58P19256 250 aa15.12■□□□□ 0.01
VAMP4-202ENST00000367740 TXLNAP40222 546 aa15.12■□□□□ 0.01
VAMP4-202ENST00000367740 CLDN2P57739 230 aa15.12■□□□□ 0.01
VAMP4-202ENST00000367740 SNRPFP62306 86 aaKnown RBP15.12■□□□□ 0.01
VAMP4-202ENST00000367740 RPS24P62847 133 aaKnown RBP15.12■□□□□ 0.01
VAMP4-202ENST00000367740 DLG4P78352 724 aa15.12■□□□□ 0.01
VAMP4-202ENST00000367740 CDH18Q13634 790 aa15.12■□□□□ 0.01
VAMP4-202ENST00000367740 SPIDRQ14159 915 aa15.12■□□□□ 0.01
VAMP4-202ENST00000367740 NCAPHQ15003 741 aa15.12■□□□□ 0.01
VAMP4-202ENST00000367740 NR0B2Q15466 257 aa15.12■□□□□ 0.01
VAMP4-202ENST00000367740 DEFB133Q30KQ1 61 aa15.12■□□□□ 0.01
VAMP4-202ENST00000367740 RNF219Q5W0B1 726 aaPredicted RBP15.12■□□□□ 0.01
VAMP4-202ENST00000367740 CCDC73Q6ZRK6 1079 aa15.12■□□□□ 0.01
VAMP4-202ENST00000367740 RAB11FIP2Q7L804 512 aa15.12■□□□□ 0.01
VAMP4-202ENST00000367740 ABI3BPQ7Z7G0 1075 aa15.12■□□□□ 0.01
VAMP4-202ENST00000367740 APCDD1Q8J025 514 aa15.12■□□□□ 0.01
VAMP4-202ENST00000367740 FBXO39Q8N4B4 442 aa15.12■□□□□ 0.01
VAMP4-202ENST00000367740 ZSCAN1Q8NBB4 408 aa15.12■□□□□ 0.01
VAMP4-202ENST00000367740 WDR48Q8TAF3 677 aa15.12■□□□□ 0.01
VAMP4-202ENST00000367740 CLIC6Q96NY7 704 aa15.12■□□□□ 0.01
VAMP4-202ENST00000367740 UBXN6Q9BZV1 441 aa15.12■□□□□ 0.01
VAMP4-202ENST00000367740 EPB41L5Q9HCM4 733 aa15.12■□□□□ 0.01
VAMP4-202ENST00000367740 SALL4Q9UJQ4 1053 aa15.12■□□□□ 0.01
VAMP4-202ENST00000367740 PLAAQ9Y263 795 aa15.12■□□□□ 0.01
VAMP4-202ENST00000367740 CEP83Q9Y592 693 aa15.12■□□□□ 0.01
VAMP4-202ENST00000367740 A0A1W2PQU0 124 aa15.11■□□□□ 0.01
VAMP4-202ENST00000367740 NTN3O00634 580 aaPredicted RBP15.11■□□□□ 0.01
VAMP4-202ENST00000367740 ACSL4O60488 711 aa15.11■□□□□ 0.01
VAMP4-202ENST00000367740 CSF2P04141 144 aa15.11■□□□□ 0.01
VAMP4-202ENST00000367740 RPN1P04843 607 aaKnown RBP15.11■□□□□ 0.01
VAMP4-202ENST00000367740 NME1P15531 152 aaKnown RBP15.11■□□□□ 0.01
VAMP4-202ENST00000367740 HNRNPA2B1P22626 353 aaKnown RBP15.11■□□□□ 0.01
VAMP4-202ENST00000367740 KCNAB2Q13303 367 aa15.11■□□□□ 0.01
VAMP4-202ENST00000367740 EIF3IQ13347 325 aaKnown RBP15.11■□□□□ 0.01
VAMP4-202ENST00000367740 FZD2Q14332 565 aa15.11■□□□□ 0.01
VAMP4-202ENST00000367740 ZNF284Q2VY69 593 aa15.11■□□□□ 0.01
VAMP4-202ENST00000367740 OR6B2Q6IFH4 312 aa15.11■□□□□ 0.01
VAMP4-202ENST00000367740 DSG4Q86SJ6 1040 aa15.11■□□□□ 0.01
VAMP4-202ENST00000367740 RNF139Q8WU17 664 aa15.11■□□□□ 0.01
VAMP4-202ENST00000367740 FRS2Q8WU20 508 aa15.11■□□□□ 0.01
VAMP4-202ENST00000367740 CCDC3Q9BQI4 270 aa15.11■□□□□ 0.01
VAMP4-202ENST00000367740 PANK2Q9BZ23 570 aa15.11■□□□□ 0.01
VAMP4-202ENST00000367740 SYNDIG1Q9H7V2 258 aa15.11■□□□□ 0.01
VAMP4-202ENST00000367740 APOBEC3GQ9HC16 384 aaKnown RBP15.11■□□□□ 0.01
VAMP4-202ENST00000367740 SEPT10Q9P0V9 454 aa15.11■□□□□ 0.01
VAMP4-202ENST00000367740 KLF15Q9UIH9 416 aa15.11■□□□□ 0.01
VAMP4-202ENST00000367740 ANAPC2Q9UJX6 822 aa15.11■□□□□ 0.01
VAMP4-202ENST00000367740 CSNK1G3Q9Y6M4 447 aa15.11■□□□□ 0.01
VAMP4-202ENST00000367740 TULP2O00295 520 aa15.1■□□□□ 0.01
VAMP4-202ENST00000367740 NVLO15381 856 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms