RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 CNOT3O75175 753 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-204ENST00000366767 CDH3P22223 829 aa5.47□□□□□ -1.53
CDC42BPA-204ENST00000366767 ACAT1P24752 427 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-204ENST00000366767 ADSLP30566 484 aaPredicted RBP5.47□□□□□ -1.53
CDC42BPA-204ENST00000366767 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.47□□□□□ -1.53
CDC42BPA-204ENST00000366767 KLF1Q13351 362 aaPredicted RBP5.47□□□□□ -1.53
CDC42BPA-204ENST00000366767 RNF19BQ6ZMZ0 732 aa5.47□□□□□ -1.53
CDC42BPA-204ENST00000366767 C19orf18Q8NEA5 215 aa5.47□□□□□ -1.53
CDC42BPA-204ENST00000366767 NDNQ99608 321 aa5.47□□□□□ -1.53
CDC42BPA-204ENST00000366767 EPS8L2Q9H6S3 715 aa5.47□□□□□ -1.53
CDC42BPA-204ENST00000366767 PCDH18Q9HCL0 1135 aa5.47□□□□□ -1.53
CDC42BPA-204ENST00000366767 NCKIPSDQ9NZQ3 722 aa5.47□□□□□ -1.53
CDC42BPA-204ENST00000366767 RUVBL2Q9Y230 463 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-204ENST00000366767 VPS9D1Q9Y2B5 631 aa5.47□□□□□ -1.53
CDC42BPA-204ENST00000366767 ACOT9Q9Y305 439 aa5.47□□□□□ -1.53
CDC42BPA-204ENST00000366767 A0A087X1B8 175 aa5.47□□□□□ -1.53
CDC42BPA-204ENST00000366767 BTN3A3O00478 584 aa5.47□□□□□ -1.53
CDC42BPA-204ENST00000366767 PDE9AO76083 593 aa5.47□□□□□ -1.53
CDC42BPA-204ENST00000366767 CCNB1P14635 433 aa5.47□□□□□ -1.53
CDC42BPA-204ENST00000366767 ATP6V1C1P21283 382 aa5.47□□□□□ -1.53
CDC42BPA-204ENST00000366767 NFKBIAP25963 317 aa5.47□□□□□ -1.53
CDC42BPA-204ENST00000366767 ARMC4Q5T2S8 1044 aa5.47□□□□□ -1.53
CDC42BPA-204ENST00000366767 DEFB106AQ8N104 65 aa5.47□□□□□ -1.53
CDC42BPA-204ENST00000366767 FITM2Q8N6M3 262 aa5.47□□□□□ -1.53
CDC42BPA-204ENST00000366767 TOP6BLQ8N6T0 577 aa5.47□□□□□ -1.53
CDC42BPA-204ENST00000366767 TMEM79Q9BSE2 394 aa5.47□□□□□ -1.53
CDC42BPA-204ENST00000366767 ZCWPW1Q9H0M4 648 aa5.47□□□□□ -1.53
CDC42BPA-204ENST00000366767 DDIT4Q9NX09 232 aa5.47□□□□□ -1.53
CDC42BPA-204ENST00000366767 UMODL1Q5DID0 1318 aa5.46□□□□□ -1.53
CDC42BPA-204ENST00000366767 DFFAO00273 331 aa5.46□□□□□ -1.53
CDC42BPA-204ENST00000366767 COL6A2P12110 1019 aa5.46□□□□□ -1.53
CDC42BPA-204ENST00000366767 AMPD1P23109 780 aa5.46□□□□□ -1.53
CDC42BPA-204ENST00000366767 LRPAP1P30533 357 aa5.46□□□□□ -1.53
CDC42BPA-204ENST00000366767 KCNJ2P63252 427 aa5.46□□□□□ -1.53
CDC42BPA-204ENST00000366767 VGLL4Q14135 290 aa5.46□□□□□ -1.53
CDC42BPA-204ENST00000366767 TRIP4Q15650 581 aaPredicted RBP5.46□□□□□ -1.53
CDC42BPA-204ENST00000366767 DGUOKQ16854 277 aa5.46□□□□□ -1.53
CDC42BPA-204ENST00000366767 ARHGAP17Q68EM7 881 aa5.46□□□□□ -1.53
CDC42BPA-204ENST00000366767 PLEKHO2Q8TD55 490 aa5.46□□□□□ -1.53
CDC42BPA-204ENST00000366767 WNT8BQ93098 351 aa5.46□□□□□ -1.53
CDC42BPA-204ENST00000366767 ENTPD7Q9NQZ7 604 aa5.46□□□□□ -1.53
CDC42BPA-204ENST00000366767 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.46□□□□□ -1.53
CDC42BPA-204ENST00000366767 CCL15-CCL14A0A0B4J2E2 113 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 LGR5O75473 907 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 CYP3A5P20815 502 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 PTGS2P35354 604 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 TUBA1BP68363 451 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 CCL15Q16663 113 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 SLC39A4Q6P5W5 647 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 KLHL17Q6TDP4 642 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 TUBA1AQ71U36 451 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 KAT2BQ92831 832 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 SDCBP2Q9H190 292 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 EIF2B3Q9NR50 452 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 MARCOQ9UEW3 520 aaPredicted RBP5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 LRFN2Q9ULH4 789 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 BAZ2AQ9UIF9 1905 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 TCRBV9S1A1TA0A576 114 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 SMNDC1O75940 238 aaKnown RBP eCLIP5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 MGAT1P26572 445 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 PRDX6P30041 224 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 IFNA8P32881 189 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 HTR7P34969 479 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 SERPINB5P36952 375 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 PRAMEF18Q5VWM3 479 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 METTL21CQ5VZV1 264 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 NUP93Q8N1F7 819 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 B3GALT6Q96L58 329 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 VRTNQ9H8Y1 702 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 HMG20AQ9NP66 347 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 PLLPQ9Y342 182 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 RNF103O00237 685 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 KLF11O14901 512 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 ZSCAN9O15535 394 aaPredicted RBP5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 ATP6V1G1O75348 118 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 MATKP42679 507 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 RAB27AP51159 221 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 TKTL1P51854 596 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 TRAF2Q12933 501 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 ANGPT1Q15389 498 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 C1orf220Q5T0J3 134 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 N4BP2L1Q5TBK1 243 aaPredicted RBP5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 TDRD5Q8NAT2 981 aaKnown RBP5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 GIPC3Q8TF64 312 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 SKA1Q96BD8 255 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 CERS2Q96G23 380 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 PWWP2AQ96N64 755 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 CEP44Q9C0F1 390 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 MSCO60682 206 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 GCATO75600 419 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 THP07101 528 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 PGK2P07205 417 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 GSCP56915 257 aaPredicted RBP5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 AASDHQ4L235 1098 aaPredicted RBP5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 CDCA2Q69YH5 1023 aaPredicted RBP5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 BNC2Q6ZN30 1099 aaPredicted RBP5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 UBASH3BQ8TF42 649 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 HPS1Q92902 700 aa5.46□□□□□ -1.54
CDC42BPA-204ENST00000366767 KCNN1Q92952 543 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms