RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 FAAP100Q0VG06 881 aa18.9■□□□□ 0.62
CLIP2-202ENST00000361545 BSNDQ8WZ55 320 aa18.9■□□□□ 0.62
CLIP2-202ENST00000361545 DUSP16Q9BY84 665 aa18.9■□□□□ 0.62
CLIP2-202ENST00000361545 NRDE2Q9H7Z3 1164 aa18.9■□□□□ 0.62
CLIP2-202ENST00000361545 ANKZF1Q9H8Y5 726 aa18.9■□□□□ 0.62
CLIP2-202ENST00000361545 CERS4Q9HA82 394 aa18.9■□□□□ 0.62
CLIP2-202ENST00000361545 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.9■□□□□ 0.62
CLIP2-202ENST00000361545 NDUFB5O43674 189 aa18.9■□□□□ 0.62
CLIP2-202ENST00000361545 ZBTB14O43829 449 aa18.9■□□□□ 0.62
CLIP2-202ENST00000361545 MAXP61244 160 aa18.9■□□□□ 0.62
CLIP2-202ENST00000361545 NOMO3P69849 1222 aa18.9■□□□□ 0.62
CLIP2-202ENST00000361545 NEPROQ6NW34 567 aa18.9■□□□□ 0.62
CLIP2-202ENST00000361545 KRT78Q8N1N4 520 aa18.9■□□□□ 0.62
CLIP2-202ENST00000361545 NAT16Q8N8M0 369 aa18.9■□□□□ 0.62
CLIP2-202ENST00000361545 METTL6Q8TCB7 284 aa18.9■□□□□ 0.62
CLIP2-202ENST00000361545 MIR1-1HGQ9H1L0 117 aa18.9■□□□□ 0.62
CLIP2-202ENST00000361545 ASB8Q9H765 288 aa18.9■□□□□ 0.62
CLIP2-202ENST00000361545 FAM153BP0C7A2 387 aa18.9■□□□□ 0.62
CLIP2-202ENST00000361545 GLUD2P49448 558 aa18.9■□□□□ 0.62
CLIP2-202ENST00000361545 HSPA14Q0VDF9 509 aa18.9■□□□□ 0.62
CLIP2-202ENST00000361545 CRY1Q16526 586 aa18.9■□□□□ 0.62
CLIP2-202ENST00000361545 FAM153CQ494X1 144 aa18.9■□□□□ 0.62
CLIP2-202ENST00000361545 LRRC8DQ7L1W4 858 aa18.9■□□□□ 0.62
CLIP2-202ENST00000361545 ATAD1Q8NBU5 361 aa18.9■□□□□ 0.62
CLIP2-202ENST00000361545 CATSPER2Q96P56 530 aa18.9■□□□□ 0.62
CLIP2-202ENST00000361545 SEMA3CQ99985 751 aa18.9■□□□□ 0.62
CLIP2-202ENST00000361545 BLOC1S6Q9UL45 172 aa18.9■□□□□ 0.62
CLIP2-202ENST00000361545 OR6C75A6NL08 312 aa18.89■□□□□ 0.62
CLIP2-202ENST00000361545 PRKCZQ05513 592 aa18.89■□□□□ 0.62
CLIP2-202ENST00000361545 SLAIN1Q8ND83 568 aa18.89■□□□□ 0.62
CLIP2-202ENST00000361545 MFSD14AQ96MC6 490 aa18.89■□□□□ 0.62
CLIP2-202ENST00000361545 PRDM12Q9H4Q4 367 aa18.89■□□□□ 0.62
CLIP2-202ENST00000361545 ARL15Q9NXU5 204 aa18.89■□□□□ 0.62
CLIP2-202ENST00000361545 AHSPQ9NZD4 102 aa18.89■□□□□ 0.62
CLIP2-202ENST00000361545 A0A0B4J269 797 aa18.89■□□□□ 0.61
CLIP2-202ENST00000361545 TMEM114B3SHH9 223 aa18.89■□□□□ 0.61
CLIP2-202ENST00000361545 PIRTP0C851 137 aa18.89■□□□□ 0.61
CLIP2-202ENST00000361545 MILR1Q7Z6M3 343 aa18.89■□□□□ 0.61
CLIP2-202ENST00000361545 DPY30Q9C005 99 aa18.89■□□□□ 0.61
CLIP2-202ENST00000361545 VPS51Q9UID3 782 aa18.89■□□□□ 0.61
CLIP2-202ENST00000361545 HNRNPRO43390 633 aaKnown RBP18.89■□□□□ 0.61
CLIP2-202ENST00000361545 NDUFS2O75306 463 aa18.89■□□□□ 0.61
CLIP2-202ENST00000361545 SLC1A6P48664 564 aa18.89■□□□□ 0.61
CLIP2-202ENST00000361545 PKN2Q16513 984 aaKnown RBP18.89■□□□□ 0.61
CLIP2-202ENST00000361545 CHMP1BQ7LBR1 199 aa18.89■□□□□ 0.61
CLIP2-202ENST00000361545 TMC3Q7Z5M5 1100 aa18.89■□□□□ 0.61
CLIP2-202ENST00000361545 HJURPQ8NCD3 748 aaPredicted RBP18.89■□□□□ 0.61
CLIP2-202ENST00000361545 MYCBPAPQ8TBZ2 947 aa18.89■□□□□ 0.61
CLIP2-202ENST00000361545 RNF157Q96PX1 679 aa18.89■□□□□ 0.61
CLIP2-202ENST00000361545 TLE6Q9H808 572 aa18.89■□□□□ 0.61
CLIP2-202ENST00000361545 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.89■□□□□ 0.616e-8■■■□□ 16.2
CLIP2-202ENST00000361545 MPP6Q9NZW5 540 aa18.89■□□□□ 0.61
CLIP2-202ENST00000361545 POLG2Q9UHN1 485 aa18.89■□□□□ 0.61
CLIP2-202ENST00000361545 MYO5BQ9ULV0 1848 aa18.89■□□□□ 0.61
CLIP2-202ENST00000361545 RASSF9O75901 435 aa18.89■□□□□ 0.61
CLIP2-202ENST00000361545 CHPFQ8IZ52 775 aa18.89■□□□□ 0.61
CLIP2-202ENST00000361545 FGFBP2Q9BYJ0 223 aa18.89■□□□□ 0.61
CLIP2-202ENST00000361545 SOWAHBA6NEL2 793 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 TRIM13O60858 407 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 IMPDH2P12268 514 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 ATP4AP20648 1035 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 PRR23CQ6ZRP0 262 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 FNDC5Q8NAU1 212 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 IMPAD1Q9NX62 359 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 SEC22BO75396 215 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 ZNF23P17027 643 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 UBE3AQ05086 875 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 CHRNB3Q05901 458 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 RASA2Q15283 850 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 CCDC153Q494R4 210 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 RAET1GQ6H3X3 334 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 GRAMD4Q6IC98 578 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 TMCO5AQ8N6Q1 288 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 MTMR14Q8NCE2 650 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 B3GNT5Q9BYG0 378 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 TMEM51Q9NW97 253 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 CES2O00748 559 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 SEPT4O43236 478 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 ZNF862O60290 1169 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 RPN2P04844 631 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 SKIV2L2P42285 1042 aaKnown RBP18.88■□□□□ 0.61
CLIP2-202ENST00000361545 BNC2Q6ZN30 1099 aaPredicted RBP18.88■□□□□ 0.61
CLIP2-202ENST00000361545 CAVIN3Q969G5 261 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 ATP13A3Q9H7F0 1226 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 PLK2Q9NYY3 685 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.88■□□□□ 0.61
CLIP2-202ENST00000361545 NFKBIEO00221 500 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 XPO1O14980 1071 aaKnown RBP18.88■□□□□ 0.61
CLIP2-202ENST00000361545 ALBP02768 609 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 MATKP42679 507 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 BMT2Q1RMZ1 405 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 LRRC8BQ6P9F7 803 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 PHF13Q86YI8 300 aaPredicted RBP18.88■□□□□ 0.61
CLIP2-202ENST00000361545 OLFM3Q96PB7 478 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 SMAD5Q99717 465 aaKnown RBP18.88■□□□□ 0.61
CLIP2-202ENST00000361545 MYOCQ99972 504 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 RPS6KB2Q9UBS0 482 aa18.88■□□□□ 0.61
CLIP2-202ENST00000361545 FGBP02675 491 aa18.87■□□□□ 0.61
CLIP2-202ENST00000361545 INHAP05111 366 aa18.87■□□□□ 0.61
CLIP2-202ENST00000361545 ERCC2P18074 760 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms