RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 RAD51BO15315 384 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 PSMB4P28070 264 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 TKTP29401 623 aaKnown RBP14.19□□□□□ -0.14
SMC5-201ENST00000361138 PRDX6P30041 224 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 PTP4A2Q12974 167 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 CDC16Q13042 620 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 VPS37AQ8NEZ2 397 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 HPS1Q92902 700 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 FAM136AQ96C01 138 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 TRNAU1APQ9NX07 287 aaKnown RBP14.19□□□□□ -0.14
SMC5-201ENST00000361138 KATNA1O75449 491 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 ATG7O95352 703 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 F9P00740 461 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 EPS8Q12929 822 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 BNIP2Q12982 314 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 KLF10Q13118 480 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 C19orf18Q8NEA5 215 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 IKZF4Q9H2S9 585 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 DHX33Q9H6R0 707 aaKnown RBP14.19□□□□□ -0.14
SMC5-201ENST00000361138 DDX4Q9NQI0 724 aaKnown RBP14.19□□□□□ -0.14
SMC5-201ENST00000361138 LRRC42Q9Y546 428 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 PEAK1Q9H792 1746 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 E5RJQ4 531 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 HMBSP08397 361 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 AKT1P31749 480 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 KRT20P35900 424 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 IL12RB1P42701 662 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 C15orf59Q2T9L4 293 aaPredicted RBP14.19□□□□□ -0.14
SMC5-201ENST00000361138 ZNF470Q6ECI4 717 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 NOTUMQ6P988 496 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 SCUBE3Q8IX30 993 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 SFRP1Q8N474 314 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 FAM47BQ8NA70 645 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 TUBGCP5Q96RT8 1024 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 WDR12Q9GZL7 423 aaKnown RBP14.19□□□□□ -0.14
SMC5-201ENST00000361138 SIX2Q9NPC8 291 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 SNX15Q9NRS6 342 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 SPEF2Q9C093 1822 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 MAPK1P28482 360 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 ABCG1P45844 678 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 USP4Q13107 963 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 RNASEH2BQ5TBB1 312 aaKnown RBP14.19□□□□□ -0.14
SMC5-201ENST00000361138 PKN3Q6P5Z2 889 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 TNS4Q8IZW8 715 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 NPAS2Q99743 824 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 PDCD2LQ9BRP1 358 aa14.19□□□□□ -0.14
SMC5-201ENST00000361138 CDH8P55286 799 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 AARS2Q5JTZ9 985 aaKnown RBP14.18□□□□□ -0.14
SMC5-201ENST00000361138 FAM45BPQ6NSW5 357 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 PACS1Q6VY07 963 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 UNC5AQ6ZN44 842 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 BANPQ8N9N5 519 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 FNDC5Q8NAU1 212 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 TMEM161BQ8NDZ6 487 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 OR6J1Q8NGC5 347 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 SLC38A7Q9NVC3 462 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 USE1Q9NZ43 259 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 CACNA1FO60840 1977 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 FBXO21O94952 628 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 GJA8P48165 433 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 NAGLUP54802 743 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 TRIP4Q15650 581 aaPredicted RBP14.18□□□□□ -0.14
SMC5-201ENST00000361138 DSELQ8IZU8 1212 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 OR52K1Q8NGK4 314 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 ZFAND2BQ8WV99 257 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 CPT1BQ92523 772 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 DNAJB4Q9UDY4 337 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 STX7O15400 261 aaKnown RBP14.18□□□□□ -0.14
SMC5-201ENST00000361138 NPY5RQ15761 445 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 SPANXN2Q5MJ10 180 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 ADGRF2Q8IZF7 708 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 PRDM16Q9HAZ2 1276 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 VAV3Q9UKW4 847 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 C2orf81A6NN90 581 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 PPP3CCP48454 512 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 ZIK1Q3SY52 487 aaPredicted RBP14.18□□□□□ -0.14
SMC5-201ENST00000361138 NOL11Q9H8H0 719 aaKnown RBP14.18□□□□□ -0.14
SMC5-201ENST00000361138 EIF2S1P05198 315 aaKnown RBP14.18□□□□□ -0.14
SMC5-201ENST00000361138 PCSK1P29120 753 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 MON1BQ7L1V2 547 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 FAM228AQ86W67 206 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 PSTKQ8IV42 348 aaKnown RBP14.18□□□□□ -0.14
SMC5-201ENST00000361138 C12orf56Q8IXR9 622 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 SLC10A4Q96EP9 437 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 MFSD14AQ96MC6 490 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 DEPDC7Q96QD5 511 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 HSD17B14Q9BPX1 270 aa14.18□□□□□ -0.14
SMC5-201ENST00000361138 DNAAF2Q9NVR5 837 aaKnown RBP14.18□□□□□ -0.14
SMC5-201ENST00000361138 CHD2O14647 1828 aaKnown RBP14.17□□□□□ -0.14
SMC5-201ENST00000361138 ERI2A8K979 691 aaKnown RBP14.17□□□□□ -0.14
SMC5-201ENST00000361138 NAA20P61599 178 aa14.17□□□□□ -0.14
SMC5-201ENST00000361138 PRKD2Q9BZL6 878 aa14.17□□□□□ -0.14
SMC5-201ENST00000361138 UBAP1Q9NZ09 502 aa14.17□□□□□ -0.14
SMC5-201ENST00000361138 IDH3BO43837 385 aa14.17□□□□□ -0.14
SMC5-201ENST00000361138 SEC24AO95486 1093 aa14.17□□□□□ -0.14
SMC5-201ENST00000361138 SLC2A4P14672 509 aa14.17□□□□□ -0.14
SMC5-201ENST00000361138 MSX2P35548 267 aaPredicted RBP14.17□□□□□ -0.14
SMC5-201ENST00000361138 WDR4P57081 412 aaKnown RBP14.17□□□□□ -0.14
SMC5-201ENST00000361138 NDUFA5Q16718 116 aa14.17□□□□□ -0.14
SMC5-201ENST00000361138 EGFLAMQ63HQ2 1017 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms