RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 SMG5Q9UPR3 1016 aaKnown RBP7.57□□□□□ -1.2
CLCN3-202ENST00000360642 BRCA2P51587 3418 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 ZSWIM8A7E2V4 1837 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 ADM5C9JUS6 153 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 POC1B-GALNT4F8VUJ3 575 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 APOC4-APOC2K7ER74 178 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 SPAG7O75391 227 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 BANF1O75531 89 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 APOC2P02655 101 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 HMGCRP04035 888 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 ITGB3P05106 788 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 MCF2P10911 925 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 PCK1P35558 622 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 GEMIN4P57678 1058 aaKnown RBP7.57□□□□□ -1.2
CLCN3-202ENST00000360642 DYNLT1P63172 113 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 RIPK1Q13546 671 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 TAF5Q15542 800 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 CYP4V2Q6ZWL3 525 aaPredicted RBP7.57□□□□□ -1.2
CLCN3-202ENST00000360642 ERO1BQ86YB8 467 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 UNC45BQ8IWX7 931 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 SHISA5Q8N114 240 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 CCDC63Q8NA47 563 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 C2CD4AQ8NCU7 369 aaPredicted RBP7.57□□□□□ -1.2
CLCN3-202ENST00000360642 NLGN2Q8NFZ4 835 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 MZB1Q8WU39 189 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 RMDN2Q96LZ7 410 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 MMP19Q99542 508 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 ASB7Q9H672 318 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 VPS37BQ9H9H4 285 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 PDGFCQ9NRA1 345 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 USP18Q9UMW8 372 aa7.57□□□□□ -1.2
CLCN3-202ENST00000360642 TXNP10599 105 aaKnown RBP7.56□□□□□ -1.2
CLCN3-202ENST00000360642 RPA3P35244 121 aaPredicted RBP7.56□□□□□ -1.2
CLCN3-202ENST00000360642 IREB2P48200 963 aaKnown RBP7.56□□□□□ -1.2
CLCN3-202ENST00000360642 KPNA1P52294 538 aaPredicted RBP7.56□□□□□ -1.2
CLCN3-202ENST00000360642 TNFAIP2Q03169 654 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 INCA1Q0VD86 236 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 KCTD2Q14681 263 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 ZKSCAN8Q15776 578 aaPredicted RBP7.56□□□□□ -1.2
CLCN3-202ENST00000360642 ZNF484Q5JVG2 852 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 WLSQ5T9L3 541 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 ILDR2Q71H61 639 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 ASRGL1Q7L266 308 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 ECHDC2Q86YB7 292 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 KCTD6Q8NC69 237 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 PPP1R35Q8TAP8 253 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 RCC1LQ96I51 464 aaKnown RBP7.56□□□□□ -1.2
CLCN3-202ENST00000360642 CLMNQ96JQ2 1002 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 PEBP4Q96S96 227 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 MAK16Q9BXY0 300 aaKnown RBP7.56□□□□□ -1.2
CLCN3-202ENST00000360642 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.56□□□□□ -1.2
CLCN3-202ENST00000360642 PITPNM3Q9BZ71 974 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 PDZD7Q9H5P4 517 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 FAM124BQ9H5Z6 455 aaPredicted RBP7.56□□□□□ -1.2
CLCN3-202ENST00000360642 ERAP1Q9NZ08 941 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 PSMC3IPQ9P2W1 217 aaPredicted RBP7.56□□□□□ -1.2
CLCN3-202ENST00000360642 U3KQE9 123 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 A0A1W2PPM1 405 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 TCRBV7S3A2A0A539 114 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 C2orf71A6NGG8 1288 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 GOLGA8MH3BSY2 632 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 ATP6V1G2O95670 118 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 VDRP11473 427 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 CCNB1P14635 433 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 ZNF143P52747 638 aaPredicted RBP7.56□□□□□ -1.2
CLCN3-202ENST00000360642 ARL4CP56559 192 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 ARHGAP1Q07960 439 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 SPARCL1Q14515 664 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 PDK4Q16654 411 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 GRAMD1BQ3KR37 738 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 TRNP1Q6NT89 227 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 SMC6Q96SB8 1091 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 ECT2Q9H8V3 914 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 RRAGCQ9HB90 399 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 CATSPERZQ9NTU4 200 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 AP5S1Q9NUS5 200 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 OXSMQ9NWU1 459 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 PCSK1NQ9UHG2 260 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 TMEM63AO94886 807 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 INSRRP14616 1297 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 NQO1P15559 274 aaKnown RBP7.56□□□□□ -1.2
CLCN3-202ENST00000360642 TSHRP16473 764 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 CYP3A5P20815 502 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 FPR2P25090 351 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 SSTR1P30872 391 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 DPYSL3Q14195 570 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 SLC1A5Q15758 541 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 INAVAQ3KP66 663 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 MAMDC4Q6UXC1 1216 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 C3orf62Q6ZUJ4 267 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 ZNF276Q8N554 614 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 PYROXD1Q8WU10 500 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 RSAD2Q8WXG1 361 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 MROH8Q9H579 483 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 ACSS3Q9H6R3 686 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 SYNCQ9H7C4 482 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 RSAD1Q9HA92 442 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 ARHGEF3Q9NR81 526 aa7.56□□□□□ -1.2
CLCN3-202ENST00000360642 ADARB2Q9NS39 739 aaKnown RBP7.56□□□□□ -1.2
CLCN3-202ENST00000360642 ASNSD1Q9NWL6 643 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms