RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 LENG1Q96BZ8 264 aaPredicted RBP8.77□□□□□ -1.01
RFX3-202ENST00000358730 ZFP42Q96MM3 310 aa8.77□□□□□ -1.01
RFX3-202ENST00000358730 SLC9A7Q96T83 725 aa8.77□□□□□ -1.01
RFX3-202ENST00000358730 ECSITQ9BQ95 431 aa8.77□□□□□ -1.01
RFX3-202ENST00000358730 CDH19Q9H159 772 aa8.77□□□□□ -1.01
RFX3-202ENST00000358730 COG4Q9H9E3 785 aa8.77□□□□□ -1.01
RFX3-202ENST00000358730 WDR6Q9NNW5 1121 aaKnown RBP8.77□□□□□ -1.01
RFX3-202ENST00000358730 CASS4Q9NQ75 786 aa8.77□□□□□ -1.01
RFX3-202ENST00000358730 C20orf96Q9NUD7 363 aaPredicted RBP8.77□□□□□ -1.01
RFX3-202ENST00000358730 CDH22Q9UJ99 828 aa8.77□□□□□ -1.01
RFX3-202ENST00000358730 MAGEA13PA6NCF6 341 aa8.77□□□□□ -1.01
RFX3-202ENST00000358730 ENO4A6NNW6 628 aa8.77□□□□□ -1.01
RFX3-202ENST00000358730 BTBD19C9JJ37 291 aa8.77□□□□□ -1.01
RFX3-202ENST00000358730 GOLGA8TH3BQL2 631 aa8.77□□□□□ -1.01
RFX3-202ENST00000358730 TIMM44O43615 452 aa8.77□□□□□ -1.01
RFX3-202ENST00000358730 CCNT2O60583 730 aaKnown RBP8.77□□□□□ -1.01
RFX3-202ENST00000358730 ZMPSTE24O75844 475 aa8.77□□□□□ -1.01
RFX3-202ENST00000358730 SORBS2O94875 1100 aaKnown RBP8.77□□□□□ -1.01
RFX3-202ENST00000358730 MPOP05164 745 aa8.77□□□□□ -1.01
RFX3-202ENST00000358730 UBTFL6P0CB48 400 aaPredicted RBP8.77□□□□□ -1.01
RFX3-202ENST00000358730 NFKB1P19838 968 aa8.77□□□□□ -1.01
RFX3-202ENST00000358730 IGFBP6P24592 240 aaPredicted RBP8.77□□□□□ -1.01
RFX3-202ENST00000358730 CD68P34810 354 aaPredicted RBP8.77□□□□□ -1.01
RFX3-202ENST00000358730 DAOAP59103 153 aa8.77□□□□□ -1.01
RFX3-202ENST00000358730 SEMA3BQ13214 749 aa8.77□□□□□ -1.01
RFX3-202ENST00000358730 MFSD10Q14728 455 aa8.77□□□□□ -1.01
RFX3-202ENST00000358730 GSTA3Q16772 222 aa8.77□□□□□ -1.01
RFX3-202ENST00000358730 KIAA0319Q5VV43 1072 aa8.77□□□□□ -1.01
RFX3-202ENST00000358730 IQSEC1Q6DN90 963 aa8.77□□□□□ -1.01
RFX3-202ENST00000358730 TWF2Q6IBS0 349 aaKnown RBP8.77□□□□□ -1.01
RFX3-202ENST00000358730 FRMD7Q6ZUT3 714 aa8.77□□□□□ -1.01
RFX3-202ENST00000358730 GPRIN1Q7Z2K8 1008 aa8.77□□□□□ -1.01
RFX3-202ENST00000358730 APLFQ8IW19 511 aaPredicted RBP8.77□□□□□ -1.01
RFX3-202ENST00000358730 DEFB107AQ8IZN7 70 aa8.77□□□□□ -1.01
RFX3-202ENST00000358730 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.77□□□□□ -1.01
RFX3-202ENST00000358730 SLC26A7Q8TE54 656 aa8.77□□□□□ -1.01
RFX3-202ENST00000358730 MLPHQ9BV36 600 aaPredicted RBP8.77□□□□□ -1.01
RFX3-202ENST00000358730 S100A14Q9HCY8 104 aa8.77□□□□□ -1.01
RFX3-202ENST00000358730 DDX43Q9NXZ2 648 aaKnown RBP8.77□□□□□ -1.01
RFX3-202ENST00000358730 UBP1Q9NZI7 540 aa8.77□□□□□ -1.01
RFX3-202ENST00000358730 CPSF2Q9P2I0 782 aaKnown RBP8.77□□□□□ -1.01
RFX3-202ENST00000358730 CCL15-CCL14A0A0B4J2E2 113 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 CCDC78A2IDD5 438 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 G3V2L1 256 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 PTGESO14684 152 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 NCAM2O15394 837 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 TREHO43280 583 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 ZBTB14O43829 449 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 CAPN15O75808 1086 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 ZNF189O75820 626 aaPredicted RBP8.76□□□□□ -1.01
RFX3-202ENST00000358730 AP1G2O75843 785 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 FBXO21O94952 628 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 C2P06681 752 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 USP17L7P0C7H9 530 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 ITGAXP20702 1163 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 CYP2B6P20813 491 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 CACNA2D1P54289 1103 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 AIF1P55008 147 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 SCAPQ12770 1279 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 GRIK3Q13003 919 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 PPP2R5DQ14738 602 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 CCL15Q16663 113 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 ARL13BQ3SXY8 428 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 SLC9B1Q4ZJI4 515 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 FSCBQ5H9T9 825 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 TCHHL1Q5QJ38 904 aaPredicted RBP8.76□□□□□ -1.01
RFX3-202ENST00000358730 KCTD11Q693B1 232 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 NAIF1Q69YI7 327 aaPredicted RBP8.76□□□□□ -1.01
RFX3-202ENST00000358730 ITPRIPL1Q6GPH6 555 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 OR52E8Q6IFG1 317 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 AAGABQ6PD74 315 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 DHDDSQ86SQ9 333 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 FAM35AQ86V20 835 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 TDRD5Q8NAT2 981 aaKnown RBP8.76□□□□□ -1.01
RFX3-202ENST00000358730 SMG8Q8ND04 991 aaKnown RBP8.76□□□□□ -1.01
RFX3-202ENST00000358730 HIPK4Q8NE63 616 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 OR6Y1Q8NGX8 325 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 ACTRT2Q8TDY3 377 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 HDAC11Q96DB2 347 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 VPS39Q96JC1 886 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 ZNF408Q9H9D4 720 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 NMRAL1Q9HBL8 299 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 CRTAC1Q9NQ79 661 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 IARS2Q9NSE4 1012 aaKnown RBP8.76□□□□□ -1.01
RFX3-202ENST00000358730 SNX10Q9Y5X0 201 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 RAD54BQ9Y620 910 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 ERI2A8K979 691 aaKnown RBP8.76□□□□□ -1.01
RFX3-202ENST00000358730 TK2O00142 265 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 MTSS1O43312 755 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 SMIM24O75264 130 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 LTFP02788 710 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 TPH1P17752 444 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 SAT1P21673 171 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 CRABP2P29373 138 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 EPHX2P34913 555 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 TBL3Q12788 808 aaKnown RBP8.76□□□□□ -1.01
RFX3-202ENST00000358730 ASPHQ12797 758 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 CCNIQ14094 377 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 LRRC36Q1X8D7 754 aa8.76□□□□□ -1.01
RFX3-202ENST00000358730 PRAMEF19Q5SWL8 479 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms