RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 TMCC2O75069 709 aa6.18□□□□□ -1.42
VPS13B-203ENST00000358544 IFI30P13284 250 aa6.18□□□□□ -1.42
VPS13B-203ENST00000358544 PORP16435 677 aaPredicted RBP6.18□□□□□ -1.42
VPS13B-203ENST00000358544 HOXD12P35452 270 aa6.18□□□□□ -1.42
VPS13B-203ENST00000358544 CCNG1P51959 295 aa6.18□□□□□ -1.42
VPS13B-203ENST00000358544 FNBP1LQ5T0N5 605 aa6.18□□□□□ -1.42
VPS13B-203ENST00000358544 POLNQ7Z5Q5 900 aa6.18□□□□□ -1.42
VPS13B-203ENST00000358544 FAM160B2Q86V87 743 aa6.18□□□□□ -1.42
VPS13B-203ENST00000358544 NSUN6Q8TEA1 469 aaKnown RBP6.18□□□□□ -1.42
VPS13B-203ENST00000358544 KCTD4Q8WVF5 259 aa6.18□□□□□ -1.42
VPS13B-203ENST00000358544 UNKQ9C0B0 810 aaKnown RBP6.18□□□□□ -1.42
VPS13B-203ENST00000358544 CD320Q9NPF0 282 aa6.18□□□□□ -1.42
VPS13B-203ENST00000358544 GNEQ9Y223 722 aaKnown RBP6.18□□□□□ -1.42
VPS13B-203ENST00000358544 CHADO15335 359 aa6.18□□□□□ -1.42
VPS13B-203ENST00000358544 CDC42P60953 191 aa6.18□□□□□ -1.42
VPS13B-203ENST00000358544 IL18R1Q13478 541 aa6.18□□□□□ -1.42
VPS13B-203ENST00000358544 CSHL1Q14406 222 aa6.18□□□□□ -1.42
VPS13B-203ENST00000358544 AKIRIN2Q53H80 203 aa6.18□□□□□ -1.42
VPS13B-203ENST00000358544 C2CD6Q53TS8 623 aa6.18□□□□□ -1.42
VPS13B-203ENST00000358544 GET4Q7L5D6 327 aaPredicted RBP6.18□□□□□ -1.42
VPS13B-203ENST00000358544 CHSY1Q86X52 802 aa6.18□□□□□ -1.42
VPS13B-203ENST00000358544 APPL2Q8NEU8 664 aa6.18□□□□□ -1.42
VPS13B-203ENST00000358544 TMC2Q8TDI7 906 aa6.18□□□□□ -1.42
VPS13B-203ENST00000358544 TBATAQ96M53 351 aa6.18□□□□□ -1.42
VPS13B-203ENST00000358544 PWWP2AQ96N64 755 aa6.18□□□□□ -1.42
VPS13B-203ENST00000358544 CDCA7Q9BWT1 371 aaPredicted RBP6.18□□□□□ -1.42
VPS13B-203ENST00000358544 SPAG4Q9NPE6 437 aa6.18□□□□□ -1.42
VPS13B-203ENST00000358544 K7ERI5 159 aa6.18□□□□□ -1.42
VPS13B-203ENST00000358544 GNB5O14775 395 aa6.18□□□□□ -1.42
VPS13B-203ENST00000358544 TFPTP0C1Z6 253 aa6.18□□□□□ -1.42
VPS13B-203ENST00000358544 ZNF24P17028 368 aa6.18□□□□□ -1.42
VPS13B-203ENST00000358544 NFIL3Q16649 462 aa6.18□□□□□ -1.42
VPS13B-203ENST00000358544 AADACL2Q6P093 401 aa6.18□□□□□ -1.42
VPS13B-203ENST00000358544 EIF3MQ7L2H7 374 aaKnown RBP6.18□□□□□ -1.42
VPS13B-203ENST00000358544 OR8H1Q8NGG4 311 aa6.18□□□□□ -1.42
VPS13B-203ENST00000358544 C10orf82Q8WW14 230 aa6.18□□□□□ -1.42
VPS13B-203ENST00000358544 MAGEE1Q9HCI5 957 aa6.18□□□□□ -1.42
VPS13B-203ENST00000358544 H2AFY2Q9P0M6 372 aaPredicted RBP6.18□□□□□ -1.42
VPS13B-203ENST00000358544 TRPM6Q9BX84 2022 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 TYW5A2RUC4 315 aaKnown RBP6.17□□□□□ -1.42
VPS13B-203ENST00000358544 TIPRLO75663 272 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 FADS2O95864 444 aaKnown RBP6.17□□□□□ -1.42
VPS13B-203ENST00000358544 ANXA6P08133 673 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 LCP1P13796 627 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 GNAZP19086 355 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 RGS7P49802 495 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 GEMP55040 296 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 CCDC157Q569K6 752 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 RALGPS1Q5JS13 557 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 LRRC38Q5VT99 294 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 FAIMQ9NVQ4 179 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 RNASEH1O60930 286 aaKnown RBP6.17□□□□□ -1.42
VPS13B-203ENST00000358544 FECHP22830 423 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 NPTX2P47972 431 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 CUL2Q13617 745 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 CCDC36Q8IYA8 594 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 TRPV1Q8NER1 839 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 LNX1Q8TBB1 728 aaPredicted RBP6.17□□□□□ -1.42
VPS13B-203ENST00000358544 HELQQ8TDG4 1101 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 EMILIN2Q9BXX0 1053 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 IRF2BPLQ9H1B7 796 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 CHST12Q9NRB3 414 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 IFNA7P01567 189 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 ETFBP38117 255 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 FOXO4P98177 505 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 C16orf46Q6P387 395 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 RASSF6Q6ZTQ3 369 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 KCTD8Q6ZWB6 473 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 METTL23Q86XA0 190 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 PIK3R3Q92569 461 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 SMPD3Q9NY59 655 aaPredicted RBP6.17□□□□□ -1.42
VPS13B-203ENST00000358544 PLLPQ9Y342 182 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 NPHP4O75161 1426 aaPredicted RBP6.17□□□□□ -1.42
VPS13B-203ENST00000358544 FAM86B2P0C5J1 330 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 FOSL2P15408 326 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 ENPEPQ07075 957 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 DPYSL3Q14195 570 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 NDFIP2Q9NV92 336 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 NUDT5Q9UKK9 219 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 VANGL2Q9ULK5 521 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 SF3B1O75533 1304 aaKnown RBP eCLIP6.17□□□□□ -1.426e-6■■■■■ 94.1
VPS13B-203ENST00000358544 C2orf71A6NGG8 1288 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 TPP1O14773 563 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 SLC37A4O43826 429 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 MT-CO1P00395 513 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 ABCB1P08183 1280 aaPredicted RBP6.17□□□□□ -1.42
VPS13B-203ENST00000358544 PHKA2P46019 1235 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 DSTYKQ6XUX3 929 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 RRM2BQ7LG56 351 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 MCOLN3Q8TDD5 553 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 DHX33Q9H6R0 707 aaKnown RBP6.17□□□□□ -1.42
VPS13B-203ENST00000358544 CCDC177Q9NQR7 707 aaPredicted RBP6.17□□□□□ -1.42
VPS13B-203ENST00000358544 TAS2R1Q9NYW7 299 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 DNAJB4Q9UDY4 337 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 AFF4Q9UHB7 1163 aaKnown RBP6.17□□□□□ -1.42
VPS13B-203ENST00000358544 ZC3H11AO75152 810 aaKnown RBP eCLIP6.17□□□□□ -1.42
VPS13B-203ENST00000358544 NDUFS2O75306 463 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 SCN1BQ07699 218 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 LSAMPQ13449 338 aa6.17□□□□□ -1.42
VPS13B-203ENST00000358544 ZNF235Q14590 738 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms