RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 CSRP3P50461 194 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 NUDT2P50583 147 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 RPL14P50914 215 aaKnown RBP18.06■□□□□ 0.48
RTN4-204ENST00000357732 PRKAA1Q13131 559 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 LAMC2Q13753 1193 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 DPYSQ14117 519 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 ADGRE1Q14246 886 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 KCTD2Q14681 263 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 CNGA3Q16281 694 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 HSP90AA5PQ58FG0 334 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 PIGGQ5H8A4 983 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 INTS6LQ5JSJ4 861 aaKnown RBP18.06■□□□□ 0.48
RTN4-204ENST00000357732 LIPMQ5VYY2 423 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 FBXL19Q6PCT2 694 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 CMC1Q7Z7K0 106 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 SPATA24Q86W54 205 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 ZNF669Q96BR6 464 aaPredicted RBP18.06■□□□□ 0.48
RTN4-204ENST00000357732 OTUD5Q96G74 571 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 SNX27Q96L92 541 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 PRICKLE1Q96MT3 831 aaPredicted RBP18.06■□□□□ 0.48
RTN4-204ENST00000357732 FCRL3Q96P31 734 aaPredicted RBP18.06■□□□□ 0.48
RTN4-204ENST00000357732 MRPS26Q9BYN8 205 aaKnown RBP18.06■□□□□ 0.48
RTN4-204ENST00000357732 SHCBP1LQ9BZQ2 653 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 ZNF696Q9H7X3 374 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 STAP1Q9ULZ2 295 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 MFHAS1Q9Y4C4 1052 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 CSADQ9Y600 493 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 TXNDC9O14530 226 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 XPO1O14980 1071 aaKnown RBP18.06■□□□□ 0.48
RTN4-204ENST00000357732 VTNP04004 478 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 COL6A2P12110 1019 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 LCP1P13796 627 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 NOS2P35228 1153 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 CYLC2Q14093 348 aaPredicted RBP18.06■□□□□ 0.48
RTN4-204ENST00000357732 USP41Q3LFD5 358 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 GJC2Q5T442 439 aaPredicted RBP18.06■□□□□ 0.48
RTN4-204ENST00000357732 BSPRYQ5W0U4 402 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 ZYG11AQ6WRX3 759 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 NAPRTQ6XQN6 538 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 PID1Q7Z2X4 250 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 TICAM1Q8IUC6 712 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 PLD6Q8N2A8 252 aaKnown RBP18.06■□□□□ 0.48
RTN4-204ENST00000357732 PYROXD2Q8N2H3 581 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 CCNYQ8ND76 341 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 NLRP7Q8WX94 980 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 TSNARE1Q96NA8 513 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 TSPAN18Q96SJ8 248 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 ZNF385DQ9H6B1 395 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 ELP3Q9H9T3 547 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 RGS17Q9UGC6 210 aaPredicted RBP18.06■□□□□ 0.48
RTN4-204ENST00000357732 TMCO1Q9UM00 188 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 PADI4Q9UM07 663 aa18.06■□□□□ 0.48
RTN4-204ENST00000357732 LGALS2P05162 132 aa18.05■□□□□ 0.48
RTN4-204ENST00000357732 C2P06681 752 aa18.05■□□□□ 0.48
RTN4-204ENST00000357732 SMIM18P0DKX4 95 aa18.05■□□□□ 0.48
RTN4-204ENST00000357732 POLD2P49005 469 aa18.05■□□□□ 0.48
RTN4-204ENST00000357732 MPP3Q13368 585 aa18.05■□□□□ 0.48
RTN4-204ENST00000357732 FLOT2Q14254 428 aa18.05■□□□□ 0.48
RTN4-204ENST00000357732 ADRM1Q16186 407 aa18.05■□□□□ 0.48
RTN4-204ENST00000357732 ZNF423Q2M1K9 1284 aa18.05■□□□□ 0.48
RTN4-204ENST00000357732 FAM131BQ86XD5 332 aa18.05■□□□□ 0.48
RTN4-204ENST00000357732 DSELQ8IZU8 1212 aa18.05■□□□□ 0.48
RTN4-204ENST00000357732 TNS4Q8IZW8 715 aa18.05■□□□□ 0.48
RTN4-204ENST00000357732 DRAXINQ8NBI3 349 aaPredicted RBP18.05■□□□□ 0.48
RTN4-204ENST00000357732 HIPK4Q8NE63 616 aa18.05■□□□□ 0.48
RTN4-204ENST00000357732 VAT1Q99536 393 aa18.05■□□□□ 0.48
RTN4-204ENST00000357732 GATA5Q9BWX5 397 aaPredicted RBP18.05■□□□□ 0.48
RTN4-204ENST00000357732 HACD3Q9P035 362 aa18.05■□□□□ 0.48
RTN4-204ENST00000357732 TRHDEQ9UKU6 1024 aa18.05■□□□□ 0.48
RTN4-204ENST00000357732 ASB14A6NK59 587 aa18.05■□□□□ 0.48
RTN4-204ENST00000357732 H0YJX3 145 aa18.05■□□□□ 0.48
RTN4-204ENST00000357732 DCLK1O15075 740 aa18.05■□□□□ 0.48
RTN4-204ENST00000357732 DNAJA2O60884 412 aa18.05■□□□□ 0.48
RTN4-204ENST00000357732 CLPTM1O96005 669 aa18.05■□□□□ 0.48
RTN4-204ENST00000357732 TLR1Q15399 786 aa18.05■□□□□ 0.48
RTN4-204ENST00000357732 ANO4Q32M45 955 aa18.05■□□□□ 0.48
RTN4-204ENST00000357732 SH2D4BQ5SQS7 431 aa18.05■□□□□ 0.48
RTN4-204ENST00000357732 DEFB106AQ8N104 65 aa18.05■□□□□ 0.48
RTN4-204ENST00000357732 CNTD1Q8N815 330 aa18.05■□□□□ 0.48
RTN4-204ENST00000357732 C7orf31Q8N865 590 aa18.05■□□□□ 0.48
RTN4-204ENST00000357732 MAPK15Q8TD08 544 aa18.05■□□□□ 0.48
RTN4-204ENST00000357732 OR52B2Q96RD2 323 aa18.05■□□□□ 0.48
RTN4-204ENST00000357732 MAGEB5Q9BZ81 275 aa18.05■□□□□ 0.48
RTN4-204ENST00000357732 MRPL40Q9NQ50 206 aaKnown RBP18.05■□□□□ 0.48
RTN4-204ENST00000357732 ZNF358Q9NW07 568 aa18.05■□□□□ 0.48
RTN4-204ENST00000357732 KLHL8Q9P2G9 620 aaPredicted RBP18.05■□□□□ 0.48
RTN4-204ENST00000357732 ATXN10Q9UBB4 475 aa18.05■□□□□ 0.48
RTN4-204ENST00000357732 A0A0G2JLL6 359 aaPredicted RBP18.04■□□□□ 0.48
RTN4-204ENST00000357732 CAPN8A6NHC0 703 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 HCAR3P49019 387 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 ZNF135P52742 658 aaPredicted RBP18.04■□□□□ 0.48
RTN4-204ENST00000357732 PCBP1Q15365 356 aaKnown RBP eCLIP18.04■□□□□ 0.486e-8■■□□□ 14.5
RTN4-204ENST00000357732 KCTD11Q693B1 232 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 ITPRIPL1Q6GPH6 555 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 PRRT2Q7Z6L0 340 aaPredicted RBP18.04■□□□□ 0.48
RTN4-204ENST00000357732 OR52K1Q8NGK4 314 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 DDI1Q8WTU0 396 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 PDCD6IPQ8WUM4 868 aaKnown RBP18.04■□□□□ 0.48
RTN4-204ENST00000357732 GCNAQ96QF7 691 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 NPY6RQ99463 290 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms