RNA–Protein interactions for RNA: ENST00000357714.5

CD46-204, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-204ENST00000357714 CNTNAP1P78357 1384 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 MYO18AQ92614 2054 aaKnown RBP7.83□□□□□ -1.16
CD46-204ENST00000357714 SLX4Q8IY92 1834 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 COL2A1P02458 1487 aaPredicted RBP7.83□□□□□ -1.16
CD46-204ENST00000357714 SH3PXD2BA1X283 911 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 SPATA31C2B4DYI2 1134 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 G3V2L1 256 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 STAMBPO95630 424 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 C2P06681 752 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 VARSP26640 1264 aaKnown RBP7.83□□□□□ -1.16
CD46-204ENST00000357714 GRIA4P48058 902 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 GLRBP48167 497 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 NDST2P52849 883 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 ATXN1P54253 815 aaKnown RBP7.83□□□□□ -1.16
CD46-204ENST00000357714 IKBKEQ14164 716 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 KCTD21Q4G0X4 260 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 ARL13AQ5H913 290 aaPredicted RBP7.83□□□□□ -1.16
CD46-204ENST00000357714 RSBN1LQ6PCB5 846 aaPredicted RBP7.83□□□□□ -1.16
CD46-204ENST00000357714 CYP2R1Q6VVX0 501 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 C12orf29Q8N999 325 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 C1orf127Q8N9H9 656 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 DNAAF3Q8N9W5 541 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 THAP11Q96EK4 314 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 CNDP1Q96KN2 507 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 CIB1Q99828 191 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 TBC1D23Q9NUY8 699 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 MTMR10Q9NXD2 777 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 GGA3Q9NZ52 723 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 DTLQ9NZJ0 730 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 SIX4Q9UIU6 781 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 FIS1Q9Y3D6 152 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 LRRC37AA6NMS7 1700 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 TK2O00142 265 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 RNF103O00237 685 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 TRIM38O00635 465 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 MDM4O15151 490 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 B4GALT4O60513 344 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 FOXD2O60548 495 aaPredicted RBP7.83□□□□□ -1.16
CD46-204ENST00000357714 USP12O75317 370 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 TFPTP0C1Z6 253 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 MCF2P10911 925 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 PSMB4P28070 264 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 NR2C2P49116 596 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 CCR3P51677 355 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 STAT5BP51692 787 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 NDST1P52848 882 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 IFRD2Q12894 506 aaPredicted RBP7.83□□□□□ -1.16
CD46-204ENST00000357714 ATF7IP2Q5U623 682 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 EEF1DP3Q658K8 133 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 MPZL3Q6UWV2 235 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 ZBTB49Q6ZSB9 765 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 TMEM192Q8IY95 271 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 ZNF786Q8N393 782 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 CCNYL1Q8N7R7 359 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 FAM47BQ8NA70 645 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 CCDC97Q96F63 343 aaPredicted RBP7.83□□□□□ -1.16
CD46-204ENST00000357714 RBBP8Q99708 897 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 ACE2Q9BYF1 805 aaPredicted RBP7.83□□□□□ -1.16
CD46-204ENST00000357714 PAIP1Q9H074 479 aaKnown RBP7.83□□□□□ -1.16
CD46-204ENST00000357714 PFDN4Q9NQP4 134 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 TBCCD1Q9NVR7 557 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 MID2Q9UJV3 735 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 VPS28Q9UK41 221 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 TLK1Q9UKI8 766 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 AP4E1Q9UPM8 1137 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 DOLKQ9UPQ8 538 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 MFHAS1Q9Y4C4 1052 aa7.83□□□□□ -1.16
CD46-204ENST00000357714 TMEM221A6NGB7 291 aa7.82□□□□□ -1.16
CD46-204ENST00000357714 H3BNH8 94 aa7.82□□□□□ -1.16
CD46-204ENST00000357714 GPR25O00155 361 aa7.82□□□□□ -1.16
CD46-204ENST00000357714 ACOT8O14734 319 aa7.82□□□□□ -1.16
CD46-204ENST00000357714 GIPC1O14908 333 aa7.82□□□□□ -1.16
CD46-204ENST00000357714 B4GALT5O43286 388 aa7.82□□□□□ -1.16
CD46-204ENST00000357714 SEC24DO94855 1032 aaPredicted RBP7.82□□□□□ -1.16
CD46-204ENST00000357714 TFE3P19532 575 aaPredicted RBP7.82□□□□□ -1.16
CD46-204ENST00000357714 ARL4AP40617 200 aa7.82□□□□□ -1.16
CD46-204ENST00000357714 ALDH3B2P48448 385 aa7.82□□□□□ -1.16
CD46-204ENST00000357714 PSMD7P51665 324 aa7.82□□□□□ -1.16
CD46-204ENST00000357714 LIMK2P53671 638 aa7.82□□□□□ -1.16
CD46-204ENST00000357714 SLC5A3P53794 718 aa7.82□□□□□ -1.16
CD46-204ENST00000357714 PSME3P61289 254 aa7.82□□□□□ -1.16
CD46-204ENST00000357714 TXNL4AP83876 142 aaKnown RBP7.82□□□□□ -1.16
CD46-204ENST00000357714 LAMTOR4Q0VGL1 99 aa7.82□□□□□ -1.16
CD46-204ENST00000357714 PRKAA1Q13131 559 aa7.82□□□□□ -1.16
CD46-204ENST00000357714 OLIG2Q13516 323 aa7.82□□□□□ -1.16
CD46-204ENST00000357714 DPYSQ14117 519 aa7.82□□□□□ -1.16
CD46-204ENST00000357714 GOLGA7BQ2TAP0 167 aa7.82□□□□□ -1.16
CD46-204ENST00000357714 MTX3Q5HYI7 312 aa7.82□□□□□ -1.16
CD46-204ENST00000357714 GLRA4Q5JXX5 417 aa7.82□□□□□ -1.16
CD46-204ENST00000357714 MAP1SQ66K74 1059 aaPredicted RBP7.82□□□□□ -1.16
CD46-204ENST00000357714 GRAMD4Q6IC98 578 aa7.82□□□□□ -1.16
CD46-204ENST00000357714 PID1Q7Z2X4 250 aa7.82□□□□□ -1.16
CD46-204ENST00000357714 TRIM50Q86XT4 487 aa7.82□□□□□ -1.16
CD46-204ENST00000357714 URGCPQ8TCY9 931 aa7.82□□□□□ -1.16
CD46-204ENST00000357714 BIRC8Q96P09 236 aa7.82□□□□□ -1.16
CD46-204ENST00000357714 CSPG4P5Q96PW8 444 aa7.82□□□□□ -1.16
CD46-204ENST00000357714 AGAP2Q99490 1192 aa7.82□□□□□ -1.16
CD46-204ENST00000357714 SLC29A1Q99808 456 aa7.82□□□□□ -1.16
CD46-204ENST00000357714 EFHD1Q9BUP0 239 aa7.82□□□□□ -1.16
CD46-204ENST00000357714 B3GNT5Q9BYG0 378 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms