RNA–Protein interactions for RNA: ENST00000357710.8

PSEN1-202, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-202ENST00000357710 PPM1KQ8N3J5 372 aa11.5□□□□□ -0.57
PSEN1-202ENST00000357710 SNX31Q8N9S9 440 aa11.5□□□□□ -0.57
PSEN1-202ENST00000357710 DYNLL2Q96FJ2 89 aa11.5□□□□□ -0.57
PSEN1-202ENST00000357710 CNOT6LQ96LI5 555 aaKnown RBP11.5□□□□□ -0.57
PSEN1-202ENST00000357710 TMEM120AQ9BXJ8 343 aa11.5□□□□□ -0.57
PSEN1-202ENST00000357710 IDI2Q9BXS1 227 aa11.5□□□□□ -0.57
PSEN1-202ENST00000357710 MRM3Q9HC36 420 aaKnown RBP11.5□□□□□ -0.57
PSEN1-202ENST00000357710 MRPL40Q9NQ50 206 aaKnown RBP11.5□□□□□ -0.57
PSEN1-202ENST00000357710 DDX4Q9NQI0 724 aaKnown RBP11.5□□□□□ -0.57
PSEN1-202ENST00000357710 POLE3Q9NRF9 147 aa11.5□□□□□ -0.57
PSEN1-202ENST00000357710 ACTR3BQ9P1U1 418 aa11.5□□□□□ -0.57
PSEN1-202ENST00000357710 ADGRE2Q9UHX3 823 aa11.5□□□□□ -0.57
PSEN1-202ENST00000357710 ENOPH1Q9UHY7 261 aa11.5□□□□□ -0.57
PSEN1-202ENST00000357710 DNMT3LQ9UJW3 386 aa11.5□□□□□ -0.57
PSEN1-202ENST00000357710 A0A1W2PRQ8 180 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 ZBTB43O43298 467 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 PTP4A3O75365 173 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 ABHD2P08910 425 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 RPS12P25398 132 aaKnown RBP11.49□□□□□ -0.57
PSEN1-202ENST00000357710 RPL21P46778 160 aaKnown RBP11.49□□□□□ -0.57
PSEN1-202ENST00000357710 CACNB3P54284 484 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 EIF6P56537 245 aaKnown RBP11.49□□□□□ -0.57
PSEN1-202ENST00000357710 GNA12Q03113 381 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 NAB1Q13506 487 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 KRR1Q13601 381 aaKnown RBP11.49□□□□□ -0.57
PSEN1-202ENST00000357710 RAPGEF1Q13905 1077 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 HORMAD1Q86X24 394 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 CARM1Q86X55 608 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 MICU3Q86XE3 530 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 STX12Q86Y82 276 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 GSTCDQ8NEC7 633 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 C9orf16Q9BUW7 83 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 CHID1Q9BWS9 393 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 TEX13BQ9BXU2 312 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 GPN2Q9H9Y4 310 aaPredicted RBP11.49□□□□□ -0.57
PSEN1-202ENST00000357710 PIH1D1Q9NWS0 290 aaKnown RBP11.49□□□□□ -0.57
PSEN1-202ENST00000357710 WHRNQ9P202 907 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 NID2Q14112 1375 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 COL2A1P02458 1487 aaPredicted RBP11.49□□□□□ -0.57
PSEN1-202ENST00000357710 DICER1Q9UPY3 1922 aaKnown RBP11.49□□□□□ -0.57
PSEN1-202ENST00000357710 ATP2A1O14983 1001 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 SSX5O60225 188 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 CALB1P05937 261 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 UGT2B4P06133 528 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 NPR3P17342 541 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 PIK3R1P27986 724 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 VAC14Q08AM6 782 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 CSTF3Q12996 717 aaKnown RBP11.49□□□□□ -0.57
PSEN1-202ENST00000357710 TOP3AQ13472 1001 aaPredicted RBP11.49□□□□□ -0.57
PSEN1-202ENST00000357710 PLEKHG4Q58EX7 1191 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 STK32CQ86UX6 486 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 TRABD2AQ86V40 505 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 DIS3L2Q8IYB7 885 aaKnown RBP11.49□□□□□ -0.57
PSEN1-202ENST00000357710 ZNF444Q8N0Y2 327 aaPredicted RBP11.49□□□□□ -0.57
PSEN1-202ENST00000357710 VANGL1Q8TAA9 524 aaPredicted RBP11.49□□□□□ -0.57
PSEN1-202ENST00000357710 DHX38Q92620 1227 aaKnown RBP11.49□□□□□ -0.57
PSEN1-202ENST00000357710 MARC2Q969Z3 335 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 ERLEC1Q96DZ1 483 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 SLC10A4Q96EP9 437 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 SH3YL1Q96HL8 342 aaPredicted RBP11.49□□□□□ -0.57
PSEN1-202ENST00000357710 TMEM246Q9BRR3 403 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 KIFC1Q9BW19 673 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 TRIM8Q9BZR9 551 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 VRTNQ9H8Y1 702 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 AKIP1Q9NQ31 210 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 RPRD1BQ9NQG5 326 aaKnown RBP11.49□□□□□ -0.57
PSEN1-202ENST00000357710 FBXO28Q9NVF7 368 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 TRPM5Q9NZQ8 1165 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 POLG2Q9UHN1 485 aa11.49□□□□□ -0.57
PSEN1-202ENST00000357710 SPDYE2BA6NHP3 402 aa11.48□□□□□ -0.57
PSEN1-202ENST00000357710 NOS1APO75052 506 aaPredicted RBP11.48□□□□□ -0.57
PSEN1-202ENST00000357710 MICAL2O94851 1124 aa11.48□□□□□ -0.57
PSEN1-202ENST00000357710 FGGP02679 453 aa11.48□□□□□ -0.57
PSEN1-202ENST00000357710 SPDYE6P0CI01 402 aa11.48□□□□□ -0.57
PSEN1-202ENST00000357710 GABRB3P28472 473 aa11.48□□□□□ -0.57
PSEN1-202ENST00000357710 SEC23AQ15436 765 aa11.48□□□□□ -0.57
PSEN1-202ENST00000357710 IFIT1BQ5T764 474 aaKnown RBP11.48□□□□□ -0.57
PSEN1-202ENST00000357710 GADL1Q6ZQY3 521 aa11.48□□□□□ -0.57
PSEN1-202ENST00000357710 ZNF680Q8NEM1 530 aa11.48□□□□□ -0.57
PSEN1-202ENST00000357710 RIPOR3Q96MK2 946 aa11.48□□□□□ -0.57
PSEN1-202ENST00000357710 ASB2Q96Q27 587 aa11.48□□□□□ -0.57
PSEN1-202ENST00000357710 CSRNP1Q96S65 589 aa11.48□□□□□ -0.57
PSEN1-202ENST00000357710 TBCBQ99426 244 aa11.48□□□□□ -0.57
PSEN1-202ENST00000357710 RC3H2Q9HBD1 1191 aaKnown RBP11.48□□□□□ -0.57
PSEN1-202ENST00000357710 PRDM8Q9NQV8 689 aa11.48□□□□□ -0.57
PSEN1-202ENST00000357710 RNF112Q9ULX5 631 aa11.48□□□□□ -0.57
PSEN1-202ENST00000357710 NAALADL1Q9UQQ1 740 aa11.48□□□□□ -0.57
PSEN1-202ENST00000357710 PCDHAC2Q9Y5I4 1007 aa11.48□□□□□ -0.57
PSEN1-202ENST00000357710 CENPXA8MT69 81 aa11.48□□□□□ -0.57
PSEN1-202ENST00000357710 KATNA1O75449 491 aa11.48□□□□□ -0.57
PSEN1-202ENST00000357710 DAB1O75553 588 aa11.48□□□□□ -0.57
PSEN1-202ENST00000357710 SNAP29O95721 258 aa11.48□□□□□ -0.57
PSEN1-202ENST00000357710 GSNP06396 782 aa11.48□□□□□ -0.57
PSEN1-202ENST00000357710 BMP1P13497 986 aa11.48□□□□□ -0.57
PSEN1-202ENST00000357710 F8A1P23610 371 aa11.48□□□□□ -0.57
PSEN1-202ENST00000357710 HOXA7P31268 230 aaPredicted RBP11.48□□□□□ -0.57
PSEN1-202ENST00000357710 CDH5P33151 784 aaPredicted RBP11.48□□□□□ -0.57
PSEN1-202ENST00000357710 SERPINB5P36952 375 aa11.48□□□□□ -0.57
PSEN1-202ENST00000357710 CDK8P49336 464 aa11.48□□□□□ -0.57
PSEN1-202ENST00000357710 TOB1P50616 345 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms