RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 COX4I2Q96KJ9 171 aa10.88□□□□□ -0.67
CAPN3-205ENST00000357568 MMP19Q99542 508 aa10.88□□□□□ -0.67
CAPN3-205ENST00000357568 R3HDMLQ9H3Y0 253 aa10.88□□□□□ -0.67
CAPN3-205ENST00000357568 PXMP2Q9NR77 195 aa10.88□□□□□ -0.67
CAPN3-205ENST00000357568 RNF146Q9NTX7 359 aa10.88□□□□□ -0.67
CAPN3-205ENST00000357568 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.88□□□□□ -0.67
CAPN3-205ENST00000357568 RNF11Q9Y3C5 154 aa10.88□□□□□ -0.67
CAPN3-205ENST00000357568 LOC100653049A0A140TA62 436 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 K7ERI5 159 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 TRIM38O00635 465 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 KRT34O76011 436 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 MPOP05164 745 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 PGAM1P18669 254 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 XRCC1P18887 633 aaPredicted RBP10.87□□□□□ -0.67
CAPN3-205ENST00000357568 RBL1P28749 1068 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 ARL2P36404 184 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 ASPAP45381 313 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 FCGRTP55899 365 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 BCAR1P56945 870 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 ESRRGP62508 458 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 TRAP1Q12931 704 aaKnown RBP10.87□□□□□ -0.67
CAPN3-205ENST00000357568 EMC2Q15006 297 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 DUOXA2Q1HG44 320 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 ZBED5Q49AG3 693 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 NCCRP1Q6ZVX7 275 aaPredicted RBP10.87□□□□□ -0.67
CAPN3-205ENST00000357568 COLGALT2Q8IYK4 626 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 TNIP2Q8NFZ5 429 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 DEPTORQ8TB45 409 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 DQX1Q8TE96 717 aaKnown RBP10.87□□□□□ -0.67
CAPN3-205ENST00000357568 AFG1LQ8WV93 481 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 ASB9Q96DX5 294 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 RMND5BQ96G75 393 aaPredicted RBP10.87□□□□□ -0.67
CAPN3-205ENST00000357568 CDHR1Q96JP9 859 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 CNDP2Q96KP4 475 aaKnown RBP10.87□□□□□ -0.67
CAPN3-205ENST00000357568 PEBP4Q96S96 227 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 MPHOSPH6Q99547 160 aaKnown RBP10.87□□□□□ -0.67
CAPN3-205ENST00000357568 DOK1Q99704 481 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 COPS7BQ9H9Q2 264 aaPredicted RBP10.87□□□□□ -0.67
CAPN3-205ENST00000357568 EFCAB1Q9HAE3 211 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 CLK4Q9HAZ1 481 aaKnown RBP10.87□□□□□ -0.67
CAPN3-205ENST00000357568 C8orf4Q9NR00 106 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 PCSK1NQ9UHG2 260 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 A0A087WXM4 84 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 MDM4O15151 490 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 PRPSAP2O60256 369 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 BAIAP3O94812 1187 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 HSPA4LO95757 839 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 ERBB2P04626 1255 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 HSPA1AP0DMV8 641 aaKnown RBP10.87□□□□□ -0.67
CAPN3-205ENST00000357568 HSPA1BP0DMV9 641 aaKnown RBP10.87□□□□□ -0.67
CAPN3-205ENST00000357568 ARRB2P32121 409 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 GP5P40197 560 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 PRMT2P55345 433 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 ZNF829Q3KNS6 432 aaPredicted RBP10.87□□□□□ -0.67
CAPN3-205ENST00000357568 MAMDC4Q6UXC1 1216 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 PLEKHH3Q7Z736 793 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 TTC30AQ86WT1 665 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 SNX32Q86XE0 403 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 PQLC3Q8N755 202 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 BHLHE22Q8NFJ8 381 aaPredicted RBP10.87□□□□□ -0.67
CAPN3-205ENST00000357568 CDRT15Q96T59 188 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 CPNE1Q99829 537 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 BCO2Q9BYV7 579 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 HIPK3Q9H422 1215 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 CYTH4Q9UIA0 394 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 RAP2CQ9Y3L5 183 aa10.87□□□□□ -0.67
CAPN3-205ENST00000357568 ARHGEF37A1IGU5 675 aa10.86□□□□□ -0.67
CAPN3-205ENST00000357568 C2CD4BA6NLJ0 364 aa10.86□□□□□ -0.67
CAPN3-205ENST00000357568 HDAC3O15379 428 aa10.86□□□□□ -0.67
CAPN3-205ENST00000357568 ALDH2P05091 517 aa10.86□□□□□ -0.67
CAPN3-205ENST00000357568 CCND2P30279 289 aa10.86□□□□□ -0.67
CAPN3-205ENST00000357568 PFKPQ01813 784 aa10.86□□□□□ -0.67
CAPN3-205ENST00000357568 PRKCEQ02156 737 aa10.86□□□□□ -0.67
CAPN3-205ENST00000357568 CEACAM7Q14002 265 aa10.86□□□□□ -0.67
CAPN3-205ENST00000357568 IKBKEQ14164 716 aa10.86□□□□□ -0.67
CAPN3-205ENST00000357568 GPR180Q86V85 440 aa10.86□□□□□ -0.67
CAPN3-205ENST00000357568 SLC35B4Q969S0 331 aa10.86□□□□□ -0.67
CAPN3-205ENST00000357568 HSPBAP1Q96EW2 488 aa10.86□□□□□ -0.67
CAPN3-205ENST00000357568 QKIQ96PU8 341 aaKnown RBP eCLIP10.86□□□□□ -0.67
CAPN3-205ENST00000357568 CPXM1Q96SM3 734 aa10.86□□□□□ -0.67
CAPN3-205ENST00000357568 GTF2IRD1Q9UHL9 959 aa10.86□□□□□ -0.67
CAPN3-205ENST00000357568 PCDHGB4Q9UN71 923 aa10.86□□□□□ -0.67
CAPN3-205ENST00000357568 TMED5Q9Y3A6 229 aa10.86□□□□□ -0.67
CAPN3-205ENST00000357568 RIPK3Q9Y572 518 aa10.86□□□□□ -0.67
CAPN3-205ENST00000357568 PCDHGB5Q9Y5G0 923 aa10.86□□□□□ -0.67
CAPN3-205ENST00000357568 SOBPA7XYQ1 873 aa10.86□□□□□ -0.67
CAPN3-205ENST00000357568 HACD1B0YJ81 288 aa10.86□□□□□ -0.67
CAPN3-205ENST00000357568 CST3P01034 146 aaPredicted RBP10.86□□□□□ -0.67
CAPN3-205ENST00000357568 HMGCRP04035 888 aa10.86□□□□□ -0.67
CAPN3-205ENST00000357568 C7P10643 843 aa10.86□□□□□ -0.67
CAPN3-205ENST00000357568 IL4RP24394 825 aa10.86□□□□□ -0.67
CAPN3-205ENST00000357568 HOXD10P28358 340 aa10.86□□□□□ -0.67
CAPN3-205ENST00000357568 KCNC4Q03721 635 aa10.86□□□□□ -0.67
CAPN3-205ENST00000357568 TMEM62Q0P6H9 643 aa10.86□□□□□ -0.67
CAPN3-205ENST00000357568 MMRN1Q13201 1228 aa10.86□□□□□ -0.67
CAPN3-205ENST00000357568 PPP2R5DQ14738 602 aa10.86□□□□□ -0.67
CAPN3-205ENST00000357568 ZNF699Q32M78 642 aa10.86□□□□□ -0.67
CAPN3-205ENST00000357568 SLC9B1Q4ZJI4 515 aa10.86□□□□□ -0.67
CAPN3-205ENST00000357568 ATG14Q6ZNE5 492 aa10.86□□□□□ -0.67
CAPN3-205ENST00000357568 GPR142Q7Z601 462 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms