RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 DNAJA4Q8WW22 397 aaPredicted RBP4.75□□□□□ -1.65
SYNE2-203ENST00000357395 TNFRSF25Q93038 417 aa4.75□□□□□ -1.65
SYNE2-203ENST00000357395 HDHD2Q9H0R4 259 aa4.75□□□□□ -1.65
SYNE2-203ENST00000357395 IL1RAPQ9NPH3 570 aa4.75□□□□□ -1.65
SYNE2-203ENST00000357395 INTS10Q9NVR2 710 aaKnown RBP4.75□□□□□ -1.65
SYNE2-203ENST00000357395 PRKAG2Q9UGJ0 569 aa4.75□□□□□ -1.65
SYNE2-203ENST00000357395 C5orf60A6NFR6 353 aa4.75□□□□□ -1.65
SYNE2-203ENST00000357395 CDNFQ49AH0 187 aa4.75□□□□□ -1.65
SYNE2-203ENST00000357395 IFNL1Q8IU54 200 aa4.75□□□□□ -1.65
SYNE2-203ENST00000357395 ELMOD1Q8N336 334 aa4.75□□□□□ -1.65
SYNE2-203ENST00000357395 ING5Q8WYH8 240 aa4.75□□□□□ -1.65
SYNE2-203ENST00000357395 ZSWIM3Q96MP5 696 aa4.75□□□□□ -1.65
SYNE2-203ENST00000357395 HNRNPABQ99729 332 aaKnown RBP4.75□□□□□ -1.65
SYNE2-203ENST00000357395 TRMT112Q9UI30 125 aaKnown RBP4.75□□□□□ -1.65
SYNE2-203ENST00000357395 ARID1AO14497 2285 aa4.75□□□□□ -1.65
SYNE2-203ENST00000357395 LDHBP07195 334 aaKnown RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 BST2Q10589 180 aaKnown RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 DGKDQ16760 1214 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 USP30Q70CQ3 517 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 BHLHE22Q8NFJ8 381 aaPredicted RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 PPEF2O14830 753 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 TGM4P49221 684 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 STXBP5Q5T5C0 1151 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 HES5Q5TA89 166 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 MTDHQ86UE4 582 aaKnown RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 NFATC2IPQ8NCF5 419 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 AGAP11Q8TF27 550 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 OXNAD1Q96HP4 312 aaPredicted RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 GPATCH1Q9BRR8 931 aaKnown RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 LRRC40Q9H9A6 602 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 KIF28PB7ZC32 967 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 TGOLN2O43493 480 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 NUDT7P0C024 238 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 ATP1A4Q13733 1029 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 ARHGAP36Q6ZRI8 547 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 ZNF655Q8N720 491 aaPredicted RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 NSMCE2Q96MF7 247 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 TM9SF2Q99805 663 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 TMEM161AQ9NX61 479 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 POLR1AO95602 1720 aaPredicted RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 H0Y858 1186 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 MLNP12872 115 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 HTR7P34969 479 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 SLC13A2Q13183 592 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 ADAM15Q13444 863 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 THEMIS2Q5TEJ8 643 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 PKN3Q6P5Z2 889 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 CLVS1Q8IUQ0 354 aaPredicted RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 ASCC1Q8N9N2 400 aaKnown RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 ATG16L2Q8NAA4 619 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 DNAJC28Q9NX36 388 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 CAPN6Q9Y6Q1 641 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 ULK1O75385 1050 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 NCALDP61601 193 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 PRAMEP78395 509 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 CBLBQ13191 982 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 C15orf52Q6ZUT6 534 aaKnown RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 CHSY1Q86X52 802 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 FSTL5Q8N475 847 aaPredicted RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 C7orf25Q9BPX7 421 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 SENP2Q9HC62 589 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 C6orf229H3BNL8 230 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 PDE8AO60658 829 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 TTC37Q6PGP7 1564 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 ZNF70Q9UC06 446 aaPredicted RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 KCNJ14Q9UNX9 436 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 SH2B2O14492 632 aaPredicted RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 VEGFCP49767 419 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 TMPRSS11AQ6ZMR5 421 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 FRMD7Q6ZUT3 714 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 PHACTR4Q8IZ21 702 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 FRMD6Q96NE9 622 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 MMS19Q96T76 1030 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 ADAMTS10Q9H324 1103 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 UBQLN1Q9UMX0 589 aaKnown RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 USTQ9Y2C2 406 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 SYNJ2BP-COX16A0A087WUM0 186 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 KLF11O14901 512 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 DENRO43583 198 aaKnown RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 RNH1P13489 461 aaKnown RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 GLDCP23378 1020 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 POLA2Q14181 598 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 SVBPQ8N300 66 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 TC2NQ8N9U0 490 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 SIK2Q9H0K1 926 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 BIN3Q9NQY0 253 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 FARSAQ9Y285 508 aaKnown RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 BIVM-ERCC5R4GMW8 1640 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 EFCAB7A8K855 629 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 ADAM12O43184 909 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 BCAR1P56945 870 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 GABARAPL2P60520 117 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 C18orf8Q96DM3 657 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 SNX18Q96RF0 628 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 CENPOQ9BU64 300 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 ADAP00813 363 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 ATF4P18848 351 aaPredicted RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 STAT3P40763 770 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 GUCA1AP43080 201 aaPredicted RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 BTN3A2P78410 334 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms