RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 TRHDEQ9UKU6 1024 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 SAMD9LQ8IVG5 1584 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 A0A0X1KG70 313 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 HACD1B0YJ81 288 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 PTPN3P26045 913 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 LHX1P48742 406 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 NR2C2P49116 596 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 SLC26A2P50443 739 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 DGCR6Q14129 220 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 CARNMT1Q8N4J0 409 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 MREGQ8N565 214 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 ZNF614Q8N883 585 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 TRPV1Q8NER1 839 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 TBX20Q9UMR3 447 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 SSR3Q9UNL2 185 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 MAP3K4Q9Y6R4 1608 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 CHP2O43745 196 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 RHOCP08134 193 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 ACO1P21399 889 aaKnown RBP13.06□□□□□ -0.32
SMC4-202ENST00000357388 RFX3P48380 749 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 TUBA3CQ13748 450 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 BMPR2Q13873 1038 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 ZC2HC1CQ53FD0 456 aaPredicted RBP13.06□□□□□ -0.32
SMC4-202ENST00000357388 ZCCHC9Q8N567 271 aaKnown RBP13.06□□□□□ -0.32
SMC4-202ENST00000357388 POMGNT2Q8NAT1 580 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 NACC2Q96BF6 587 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 ZCCHC2Q9C0B9 1178 aaKnown RBP13.06□□□□□ -0.32
SMC4-202ENST00000357388 SEMA6AQ9H2E6 1030 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 USP18Q9UMW8 372 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 S100A3P33764 101 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 RHOAP61586 193 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 ATG4CQ96DT6 458 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 SLC38A2Q96QD8 506 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 MID1IP1Q9NPA3 183 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 STARD7Q9NQZ5 370 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 CLIC5Q9NZA1 410 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 VPS28Q9UK41 221 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 PRDM4Q9UKN5 801 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 FOXN3O00409 490 aaPredicted RBP13.05□□□□□ -0.32
SMC4-202ENST00000357388 DCXO43602 365 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 CYP11B2P19099 503 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 RENBPP51606 427 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 RIPPLY1Q0D2K3 151 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 MTM1Q13496 603 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 LPIN1Q14693 890 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 RP9Q8TA86 221 aaKnown RBP13.05□□□□□ -0.32
SMC4-202ENST00000357388 SYTL5Q8TDW5 730 aaPredicted RBP13.05□□□□□ -0.32
SMC4-202ENST00000357388 MAGEB10Q96LZ2 347 aaPredicted RBP13.05□□□□□ -0.32
SMC4-202ENST00000357388 TMEM121Q9BTD3 319 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 SENP2Q9HC62 589 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 ADAM28Q9UKQ2 775 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 CDC40O60508 579 aaKnown RBP eCLIP13.05□□□□□ -0.32
SMC4-202ENST00000357388 RPS6KA3P51812 740 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 ATN1P54259 1190 aaPredicted RBP13.05□□□□□ -0.32
SMC4-202ENST00000357388 USP46P62068 366 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 ENPEPQ07075 957 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 SCRN3Q0VDG4 424 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 CDKAL1Q5VV42 579 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 MOXD1Q6UVY6 613 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 ARCQ7LC44 396 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 TMC7Q7Z402 723 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 KCNMB4Q86W47 210 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 COLGALT1Q8NBJ5 622 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 MAGEE2Q8TD90 523 aaPredicted RBP13.05□□□□□ -0.32
SMC4-202ENST00000357388 VCPIP1Q96JH7 1222 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 OXCT2Q9BYC2 517 aaPredicted RBP13.05□□□□□ -0.32
SMC4-202ENST00000357388 SPAG4Q9NPE6 437 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 KCNH7Q9NS40 1196 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 AP4E1Q9UPM8 1137 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 KHDRBS3O75525 346 aaKnown RBP13.05□□□□□ -0.32
SMC4-202ENST00000357388 HLA-DQA1Q5Y7H0 255 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 GJB7Q6PEY0 223 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 DSG4Q86SJ6 1040 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 BPIFB6Q8NFQ5 453 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 TARS2Q9BW92 718 aaKnown RBP13.05□□□□□ -0.32
SMC4-202ENST00000357388 C1QTNF1Q9BXJ1 281 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 IKZF3Q9UKT9 509 aa13.05□□□□□ -0.32
SMC4-202ENST00000357388 TNPO3Q9Y5L0 923 aaKnown RBP13.05□□□□□ -0.32
SMC4-202ENST00000357388 A0A096LPK6 155 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 KCNQ2O43526 872 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 ABHD2P08910 425 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 DBTP11182 482 aaKnown RBP13.04□□□□□ -0.32
SMC4-202ENST00000357388 ELK3P41970 407 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 RAB27AP51159 221 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 MAPK10P53779 464 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 BST2Q10589 180 aaKnown RBP13.04□□□□□ -0.32
SMC4-202ENST00000357388 PGBD2Q6P3X8 592 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 RAB43Q86YS6 212 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 HIPK1Q86Z02 1210 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 ZNF540Q8NDQ6 660 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 CYP3A43Q9HB55 503 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 MDM4O15151 490 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 CCNKO75909 580 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 PGK1P00558 417 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 UQCRBP14927 111 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 S100GP29377 79 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 BCAT1P54687 386 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 FOXO4P98177 505 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 SGCGQ13326 291 aa13.04□□□□□ -0.32
SMC4-202ENST00000357388 ERMARDQ5T6L9 678 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms