RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 IGSF8Q969P0 613 aa26.26■■□□□ 1.79
CLK2-201ENST00000355560 NOL6Q9H6R4 1146 aaKnown RBP26.26■■□□□ 1.79
CLK2-201ENST00000355560 SMYD2Q9NRG4 433 aa26.26■■□□□ 1.79
CLK2-201ENST00000355560 TMEM248Q9NWD8 314 aa26.26■■□□□ 1.79
CLK2-201ENST00000355560 DNMT3LQ9UJW3 386 aa26.26■■□□□ 1.79
CLK2-201ENST00000355560 IQANK1A0A1B0GTG1 560 aa26.25■■□□□ 1.79
CLK2-201ENST00000355560 MATN3O15232 486 aa26.25■■□□□ 1.79
CLK2-201ENST00000355560 BAIAP3O94812 1187 aa26.25■■□□□ 1.79
CLK2-201ENST00000355560 KRT4P19013 534 aa26.25■■□□□ 1.79
CLK2-201ENST00000355560 ALDH1A3P47895 512 aa26.25■■□□□ 1.79
CLK2-201ENST00000355560 SLC26A11Q86WA9 606 aa26.25■■□□□ 1.79
CLK2-201ENST00000355560 UMODL1-AS1Q8N2C9 162 aa26.25■■□□□ 1.79
CLK2-201ENST00000355560 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP26.25■■□□□ 1.79
CLK2-201ENST00000355560 HBS1LQ9Y450 684 aaKnown RBP26.25■■□□□ 1.79
CLK2-201ENST00000355560 KIAA1671Q9BY89 1806 aa26.24■■□□□ 1.79
CLK2-201ENST00000355560 ZNF840PA6NDX5 716 aa26.24■■□□□ 1.79
CLK2-201ENST00000355560 PRPF4O43172 522 aaKnown RBP eCLIP26.24■■□□□ 1.797e-9■■■■■ 57.2
CLK2-201ENST00000355560 KCNQ1P51787 676 aa26.24■■□□□ 1.79
CLK2-201ENST00000355560 LBX1P52954 281 aa26.24■■□□□ 1.79
CLK2-201ENST00000355560 SNX30Q5VWJ9 437 aa26.24■■□□□ 1.79
CLK2-201ENST00000355560 STEAP4Q687X5 459 aa26.24■■□□□ 1.79
CLK2-201ENST00000355560 OTOP3Q7RTS5 596 aa26.24■■□□□ 1.79
CLK2-201ENST00000355560 CHSY1Q86X52 802 aa26.24■■□□□ 1.79
CLK2-201ENST00000355560 RPRD1AQ96P16 312 aaPredicted RBP26.24■■□□□ 1.79
CLK2-201ENST00000355560 ZNF317Q96PQ6 595 aaPredicted RBP26.24■■□□□ 1.79
CLK2-201ENST00000355560 IL12RB2Q99665 862 aa26.24■■□□□ 1.79
CLK2-201ENST00000355560 DONSONQ9NYP3 566 aa26.24■■□□□ 1.79
CLK2-201ENST00000355560 UBP1Q9NZI7 540 aa26.24■■□□□ 1.79
CLK2-201ENST00000355560 SMG5Q9UPR3 1016 aaKnown RBP26.24■■□□□ 1.79
CLK2-201ENST00000355560 PGAM1P18669 254 aa26.24■■□□□ 1.79
CLK2-201ENST00000355560 PRPSAP1Q14558 356 aa26.24■■□□□ 1.79
CLK2-201ENST00000355560 LRRC49Q8IUZ0 686 aa26.24■■□□□ 1.79
CLK2-201ENST00000355560 CCNJLQ8IV13 435 aa26.24■■□□□ 1.79
CLK2-201ENST00000355560 ZNF276Q8N554 614 aa26.24■■□□□ 1.79
CLK2-201ENST00000355560 GDAP1Q8TB36 358 aa26.24■■□□□ 1.79
CLK2-201ENST00000355560 IPO11Q9UI26 975 aaKnown RBP26.24■■□□□ 1.79
CLK2-201ENST00000355560 NDST2P52849 883 aa26.23■■□□□ 1.79
CLK2-201ENST00000355560 RAB33AQ14088 237 aa26.23■■□□□ 1.79
CLK2-201ENST00000355560 TAF12Q16514 161 aa26.23■■□□□ 1.79
CLK2-201ENST00000355560 ACBD5Q5T8D3 534 aaPredicted RBP26.23■■□□□ 1.79
CLK2-201ENST00000355560 NADSYN1Q6IA69 706 aa26.23■■□□□ 1.79
CLK2-201ENST00000355560 DNAAF3Q8N9W5 541 aa26.23■■□□□ 1.79
CLK2-201ENST00000355560 OXNAD1Q96HP4 312 aaPredicted RBP26.23■■□□□ 1.79
CLK2-201ENST00000355560 NAT9Q9BTE0 207 aa26.23■■□□□ 1.79
CLK2-201ENST00000355560 LAMA2P24043 3122 aaKnown RBP26.23■■□□□ 1.79
CLK2-201ENST00000355560 CARNS1A5YM72 827 aa26.23■■□□□ 1.79
CLK2-201ENST00000355560 FAM159BA6NKW6 160 aa26.23■■□□□ 1.79
CLK2-201ENST00000355560 FAM155BO75949 473 aa26.23■■□□□ 1.79
CLK2-201ENST00000355560 GJB5O95377 273 aa26.23■■□□□ 1.79
CLK2-201ENST00000355560 HECTD3Q5T447 861 aa26.23■■□□□ 1.79
CLK2-201ENST00000355560 SGSM3Q96HU1 749 aa26.23■■□□□ 1.79
CLK2-201ENST00000355560 MYRFLQ96LU7 910 aa26.23■■□□□ 1.79
CLK2-201ENST00000355560 TMEM106CQ9BVX2 250 aa26.23■■□□□ 1.79
CLK2-201ENST00000355560 LRRC40Q9H9A6 602 aa26.23■■□□□ 1.79
CLK2-201ENST00000355560 CASS4Q9NQ75 786 aa26.23■■□□□ 1.79
CLK2-201ENST00000355560 MOCS1Q9NZB8 636 aa26.23■■□□□ 1.79
CLK2-201ENST00000355560 GOLGA6L7A0A1B0GV03 622 aa26.22■■□□□ 1.79
CLK2-201ENST00000355560 PRRG1O14668 218 aa26.22■■□□□ 1.79
CLK2-201ENST00000355560 CACNG3O60359 315 aa26.22■■□□□ 1.79
CLK2-201ENST00000355560 CA4P22748 312 aa26.22■■□□□ 1.79
CLK2-201ENST00000355560 GBP2P32456 591 aaPredicted RBP26.22■■□□□ 1.79
CLK2-201ENST00000355560 PPM1AP35813 382 aa26.22■■□□□ 1.79
CLK2-201ENST00000355560 MTA1Q13330 715 aa26.22■■□□□ 1.79
CLK2-201ENST00000355560 PLD1Q13393 1074 aa26.22■■□□□ 1.79
CLK2-201ENST00000355560 CRYMQ14894 314 aa26.22■■□□□ 1.79
CLK2-201ENST00000355560 CIR1Q86X95 450 aaPredicted RBP26.22■■□□□ 1.79
CLK2-201ENST00000355560 DNAJC5GQ8N7S2 189 aa26.22■■□□□ 1.79
CLK2-201ENST00000355560 HMCESQ96FZ2 354 aa26.22■■□□□ 1.79
CLK2-201ENST00000355560 IL23AQ9NPF7 189 aa26.22■■□□□ 1.79
CLK2-201ENST00000355560 MRPL17Q9NRX2 175 aaKnown RBP26.22■■□□□ 1.79
CLK2-201ENST00000355560 TRPM5Q9NZQ8 1165 aa26.22■■□□□ 1.79
CLK2-201ENST00000355560 SAMD15Q9P1V8 674 aa26.22■■□□□ 1.79
CLK2-201ENST00000355560 ZNF180Q9UJW8 692 aa26.22■■□□□ 1.79
CLK2-201ENST00000355560 ZBBXA8MT70 800 aa26.21■■□□□ 1.79
CLK2-201ENST00000355560 COCHO43405 550 aa26.21■■□□□ 1.79
CLK2-201ENST00000355560 TYROBPO43914 113 aa26.21■■□□□ 1.79
CLK2-201ENST00000355560 VEPH1Q14D04 833 aa26.21■■□□□ 1.79
CLK2-201ENST00000355560 QPCTQ16769 361 aa26.21■■□□□ 1.79
CLK2-201ENST00000355560 APOL2Q9BQE5 337 aa26.21■■□□□ 1.79
CLK2-201ENST00000355560 BFARQ9NZS9 450 aa26.21■■□□□ 1.79
CLK2-201ENST00000355560 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.21■■□□□ 1.79
CLK2-201ENST00000355560 DRGXA6NNA5 263 aa26.21■■□□□ 1.79
CLK2-201ENST00000355560 ALDH1A2O94788 518 aa26.21■■□□□ 1.79
CLK2-201ENST00000355560 RPA3P35244 121 aaPredicted RBP26.21■■□□□ 1.79
CLK2-201ENST00000355560 SLC18A1P54219 525 aa26.21■■□□□ 1.79
CLK2-201ENST00000355560 TWF1Q12792 350 aa26.21■■□□□ 1.79
CLK2-201ENST00000355560 ANO4Q32M45 955 aa26.21■■□□□ 1.79
CLK2-201ENST00000355560 KLHDC10Q6PID8 442 aa26.21■■□□□ 1.79
CLK2-201ENST00000355560 CYS1Q717R9 158 aa26.21■■□□□ 1.79
CLK2-201ENST00000355560 CPLX4Q7Z7G2 160 aa26.21■■□□□ 1.79
CLK2-201ENST00000355560 UNC5BQ8IZJ1 945 aa26.21■■□□□ 1.79
CLK2-201ENST00000355560 SPATA22Q8NHS9 363 aa26.21■■□□□ 1.79
CLK2-201ENST00000355560 KLF6Q99612 283 aaPredicted RBP26.21■■□□□ 1.79
CLK2-201ENST00000355560 GLOD4Q9HC38 313 aa26.21■■□□□ 1.79
CLK2-201ENST00000355560 SSU72Q9NP77 194 aaKnown RBP26.21■■□□□ 1.79
CLK2-201ENST00000355560 RBM22Q9NW64 420 aaKnown RBP eCLIP26.21■■□□□ 1.79
CLK2-201ENST00000355560 AAR2Q9Y312 384 aaKnown RBP26.21■■□□□ 1.79
CLK2-201ENST00000355560 GOLGA8RI6L899 631 aa26.2■■□□□ 1.79
CLK2-201ENST00000355560 UGT1A9O60656 530 aa26.2■■□□□ 1.79
CLK2-201ENST00000355560 NEBLO76041 1014 aa26.2■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms