RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 TAS2R13Q9NYV9 303 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 MAPRE3Q9UPY8 281 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 C6orf222P0C671 652 aaPredicted RBP12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 GABRB2P47870 512 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 ABATP80404 500 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 SLC9A5Q14940 896 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 PRR5LQ6MZQ0 368 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 APOBEC3FQ8IUX4 373 aaKnown RBP12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 KAT2BQ92831 832 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 PNMA5Q96PV4 448 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 CLN6Q9NWW5 311 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 ZNF222Q9UK12 451 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 DYRK1BQ9Y463 629 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 TELO2Q9Y4R8 837 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 CLUHO75153 1309 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 NPM3O75607 178 aaKnown RBP12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 ZMPSTE24O75844 475 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 S100A3P33764 101 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 BICRALQ6AI39 1079 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 ZNF34Q8IZ26 560 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 MCFD2Q8NI22 146 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 OTUD5Q96G74 571 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 KIFC1Q9BW19 673 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 FBXO6Q9NRD1 293 aaPredicted RBP12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 RPS6KA6Q9UK32 745 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 SSNA1O43805 119 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 SEC22BO75396 215 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 ITGAVP06756 1048 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 HALP42357 657 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 BAG6P46379 1132 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 GSTM5P46439 218 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 LPCAT4Q643R3 524 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 ZNF470Q6ECI4 717 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 FAM180AQ6UWF9 173 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 HIPK1Q86Z02 1210 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 VAT1Q99536 393 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 MLPHQ9BV36 600 aaPredicted RBP12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 UNKQ9C0B0 810 aaKnown RBP12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 CARD8Q9Y2G2 431 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 SNX8Q9Y5X2 465 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 FYNP06241 537 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 CHKAP35790 457 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 PSMD4P55036 377 aaKnown RBP12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 MIIPQ5JXC2 388 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 APBA2Q99767 749 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 TRMT13Q9NUP7 481 aaKnown RBP12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 BST2Q10589 180 aaKnown RBP12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 ZCCHC8Q6NZY4 707 aaKnown RBP12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 EIF3MQ7L2H7 374 aaKnown RBP12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 RCN3Q96D15 328 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 GPR75-ASB3A0A0A6YYF3 556 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 GUCY1B2O75343 617 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 ZSCAN5DPP0CG00 497 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 ORC1Q13415 861 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 PACS1Q6VY07 963 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 AMIGO2Q86SJ2 522 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 SKA1Q96BD8 255 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 RPRD1AQ96P16 312 aaPredicted RBP12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 DNM1LO00429 736 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 CCNT2O60583 730 aaKnown RBP12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 GH1P01241 217 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 MTMR2Q13614 643 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 FGD3Q5JSP0 725 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 SPESP1Q6UW49 350 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 MACC1Q6ZN28 852 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 C11orf96Q7Z7L8 435 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 IZUMO1Q8IYV9 350 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 C10orf53Q8N6V4 93 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 OR6J1Q8NGC5 347 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 GRPEL2Q8TAA5 225 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 ZNF512Q96ME7 567 aaPredicted RBP12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 SLITRK1Q96PX8 696 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 MIEF1Q9NQG6 463 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 IKZF3Q9UKT9 509 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 WDR37Q9Y2I8 494 aa12.91□□□□□ -0.34
SYNCRIP-201ENST00000355238 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 H3BMM5 538 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 EPN2O95208 641 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 ZNF177Q13360 481 aaPredicted RBP12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 C10orf120Q5SQS8 335 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 CDC42EP5Q6NZY7 148 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 AADACL2Q6P093 401 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 MILR1Q7Z6M3 343 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 KRT77Q7Z794 578 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 C4orf19Q8IY42 314 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 FAM136AQ96C01 138 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 SCUBE2Q9NQ36 999 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 ERGIC3Q9Y282 383 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 UNC13BO14795 1591 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 SEMA3DO95025 777 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 EIF4BP23588 611 aaKnown RBP12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 ATP5F1P24539 256 aaPredicted RBP12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 IDH2P48735 452 aaKnown RBP12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 PIK3CGP48736 1102 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 NAGLUP54802 743 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 PROSER1Q86XN7 944 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 ECHDC2Q86YB7 292 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 ZNF671Q8TAW3 534 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 B3GALT6Q96L58 329 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 ADGRE3Q9BY15 652 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms