RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 TBRG1Q3YBR2 411 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 DPF1Q92782 380 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 ZNF560Q96MR9 790 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 TUBG2Q9NRH3 451 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 LEMD3Q9Y2U8 911 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 POTEMA6NI47 508 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 PPEF2O14830 753 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 TTKP33981 857 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 AP3S2P59780 193 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 MGAT5BQ3V5L5 792 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 SUPT20HL1Q3ZLR7 823 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 MROH8Q9H579 483 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 CDH7Q9ULB5 785 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 PSMD13Q9UNM6 376 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 OAS3Q9Y6K5 1087 aaKnown RBP8.16□□□□□ -1.1
SCN8A-201ENST00000354534 NCAPD2Q15021 1401 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 TRIM64CA6NLI5 447 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 SNAP23O00161 211 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 PSMD9O00233 223 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 CYP27B1O15528 508 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 CCNB2O95067 398 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 PRR29P0C7W0 189 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 RARBP10826 455 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 BMP7P18075 431 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 ZSWIM2Q8NEG5 633 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 COL26A1Q96A83 441 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 AHCYL2Q96HN2 611 aaKnown RBP8.16□□□□□ -1.1
SCN8A-201ENST00000354534 NLNQ9BYT8 704 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 ATXN3LQ9H3M9 355 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 LRRC40Q9H9A6 602 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 BSDC1Q9NW68 430 aaPredicted RBP8.16□□□□□ -1.1
SCN8A-201ENST00000354534 CCRL2O00421 344 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 RAB4AP20338 218 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 ALDH1A3P47895 512 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 DNASE1L3Q13609 305 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 FAXCQ5TGI0 409 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 SWSAP1Q6NVH7 229 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 LIN37Q96GY3 246 aaPredicted RBP8.16□□□□□ -1.1
SCN8A-201ENST00000354534 AP4E1Q9UPM8 1137 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 C15orf41Q9Y2V0 281 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 ATP7AQ04656 1500 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 SIN3BO75182 1162 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 PDE8BO95263 885 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 ZNF14P17017 642 aaPredicted RBP8.16□□□□□ -1.1
SCN8A-201ENST00000354534 CREB5Q02930 508 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 RMDN3Q96TC7 470 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 RAVER2Q9HCJ3 691 aaKnown RBP8.16□□□□□ -1.1
SCN8A-201ENST00000354534 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.16□□□□□ -1.1
SCN8A-201ENST00000354534 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.16□□□□□ -1.1
SCN8A-201ENST00000354534 RFX7Q2KHR2 1363 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 PVALEFA0A1B0GWK0 134 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 KIAA0391O15091 583 aaKnown RBP8.16□□□□□ -1.1
SCN8A-201ENST00000354534 ANXA9O76027 345 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 CRATP43155 626 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 ARSHQ5FYA8 562 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 JAMLQ86YT9 394 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 PHC2Q8IXK0 858 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 FAM126BQ8IXS8 530 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 ZNF548Q8NEK5 533 aaPredicted RBP8.16□□□□□ -1.1
SCN8A-201ENST00000354534 NCKIPSDQ9NZQ3 722 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 MCIDASD6RGH6 385 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 MSH4O15457 936 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 VPS4BO75351 444 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 CDC42P60953 191 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 GXYLT1Q4G148 440 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 WDR93Q6P2C0 686 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 POTEGQ6S5H5 508 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 PRR23BQ6ZRT6 265 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 EIF1ADQ8N9N8 165 aaKnown RBP8.16□□□□□ -1.1
SCN8A-201ENST00000354534 DMRTB1Q96MA1 342 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 WDCPQ9H6R7 721 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 SEC31BQ9NQW1 1179 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 MAU2Q9Y6X3 613 aa8.16□□□□□ -1.1
SCN8A-201ENST00000354534 SH3BGRLO75368 114 aa8.15□□□□□ -1.1
SCN8A-201ENST00000354534 ITGB6P18564 788 aa8.15□□□□□ -1.1
SCN8A-201ENST00000354534 RPL9P32969 192 aaKnown RBP8.15□□□□□ -1.1
SCN8A-201ENST00000354534 C6orf183Q5T699 404 aa8.15□□□□□ -1.1
SCN8A-201ENST00000354534 CXorf57Q6NSI4 855 aaKnown RBP8.15□□□□□ -1.1
SCN8A-201ENST00000354534 ATCAYQ86WG3 371 aa8.15□□□□□ -1.1
SCN8A-201ENST00000354534 OFCC1Q8IZS5 231 aa8.15□□□□□ -1.1
SCN8A-201ENST00000354534 DPP3Q9NY33 737 aa8.15□□□□□ -1.1
SCN8A-201ENST00000354534 UBP1Q9NZI7 540 aa8.15□□□□□ -1.1
SCN8A-201ENST00000354534 PHF24Q9UPV7 400 aa8.15□□□□□ -1.1
SCN8A-201ENST00000354534 KIAA0556O60303 1618 aa8.15□□□□□ -1.1
SCN8A-201ENST00000354534 ABHD14A-ACY1A0A1B0GW23 586 aa8.15□□□□□ -1.1
SCN8A-201ENST00000354534 RRM1P23921 792 aa8.15□□□□□ -1.1
SCN8A-201ENST00000354534 FDFT1P37268 417 aa8.15□□□□□ -1.1
SCN8A-201ENST00000354534 PRKAG1P54619 331 aa8.15□□□□□ -1.1
SCN8A-201ENST00000354534 VPS72Q15906 364 aa8.15□□□□□ -1.1
SCN8A-201ENST00000354534 SLC25A25Q6KCM7 469 aa8.15□□□□□ -1.1
SCN8A-201ENST00000354534 UBE2J2Q8N2K1 259 aa8.15□□□□□ -1.1
SCN8A-201ENST00000354534 SLC4A11Q8NBS3 891 aa8.15□□□□□ -1.1
SCN8A-201ENST00000354534 ENTPD4Q9Y227 616 aa8.15□□□□□ -1.1
SCN8A-201ENST00000354534 TBC1D30Q9Y2I9 924 aa8.15□□□□□ -1.1
SCN8A-201ENST00000354534 CST8O60676 142 aa8.15□□□□□ -1.1
SCN8A-201ENST00000354534 ROR2Q01974 943 aaKnown RBP8.15□□□□□ -1.1
SCN8A-201ENST00000354534 AAGABQ6PD74 315 aa8.15□□□□□ -1.1
SCN8A-201ENST00000354534 C10orf107Q8IVU9 208 aa8.15□□□□□ -1.1
SCN8A-201ENST00000354534 ZC3H7AQ8IWR0 971 aaKnown RBP8.15□□□□□ -1.1
SCN8A-201ENST00000354534 NEDD1Q8NHV4 660 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms