RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 NAPEPLDQ6IQ20 393 aa20.8■□□□□ 0.92
CHRNA3-202ENST00000348639 CES3Q6UWW8 571 aa20.8■□□□□ 0.92
CHRNA3-202ENST00000348639 ARHGAP36Q6ZRI8 547 aa20.8■□□□□ 0.92
CHRNA3-202ENST00000348639 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.8■□□□□ 0.92
CHRNA3-202ENST00000348639 CASD1Q96PB1 797 aa20.8■□□□□ 0.92
CHRNA3-202ENST00000348639 PSAT1Q9Y617 370 aa20.8■□□□□ 0.92
CHRNA3-202ENST00000348639 HS3ST4Q9Y661 456 aa20.8■□□□□ 0.92
CHRNA3-202ENST00000348639 MYO16Q9Y6X6 1858 aa20.79■□□□□ 0.92
CHRNA3-202ENST00000348639 E9PAM4 449 aa20.79■□□□□ 0.92
CHRNA3-202ENST00000348639 C2CD2LO14523 706 aa20.79■□□□□ 0.92
CHRNA3-202ENST00000348639 MAFKO60675 156 aa20.79■□□□□ 0.92
CHRNA3-202ENST00000348639 ERVK-10P10266 1014 aa20.79■□□□□ 0.92
CHRNA3-202ENST00000348639 SKIV2L2P42285 1042 aaKnown RBP20.79■□□□□ 0.92
CHRNA3-202ENST00000348639 TUBP50607 506 aa20.79■□□□□ 0.92
CHRNA3-202ENST00000348639 MLLT6P55198 1093 aaPredicted RBP20.79■□□□□ 0.92
CHRNA3-202ENST00000348639 STXBP5Q5T5C0 1151 aa20.79■□□□□ 0.92
CHRNA3-202ENST00000348639 ZNF280DQ6N043 979 aa20.79■□□□□ 0.92
CHRNA3-202ENST00000348639 ARMC2Q8NEN0 867 aa20.79■□□□□ 0.92
CHRNA3-202ENST00000348639 SLC39A13Q96H72 371 aa20.79■□□□□ 0.92
CHRNA3-202ENST00000348639 CPNE1Q99829 537 aa20.79■□□□□ 0.92
CHRNA3-202ENST00000348639 TRIM55Q9BYV6 548 aa20.79■□□□□ 0.92
CHRNA3-202ENST00000348639 GPR62Q9BZJ7 368 aa20.79■□□□□ 0.92
CHRNA3-202ENST00000348639 SLC39A8Q9C0K1 460 aa20.79■□□□□ 0.92
CHRNA3-202ENST00000348639 IL22Q9GZX6 179 aa20.79■□□□□ 0.92
CHRNA3-202ENST00000348639 MYLK2Q9H1R3 596 aa20.79■□□□□ 0.92
CHRNA3-202ENST00000348639 SHROOM3Q8TF72 1996 aa20.79■□□□□ 0.92
CHRNA3-202ENST00000348639 FAM237BA0A1B0GVD1 139 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 HGSO14964 777 aaPredicted RBP20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 MOCS2O96007 188 aaPredicted RBP20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 ALDOAP04075 364 aaKnown RBP20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 ALDH2P05091 517 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 SLC2A3P11169 496 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 HNRNPH1P31943 449 aaKnown RBP20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 GP5P40197 560 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 PRMT2P55345 433 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 USP46P62068 366 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 ANKRD20A4Q4UJ75 823 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 AFMIDQ63HM1 303 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 LINC00523Q86TU6 105 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 RTL3Q8N8U3 475 aaKnown RBP20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 ATAD1Q8NBU5 361 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 GPR152Q8TDT2 470 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 SEPT8Q92599 483 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 ZNF669Q96BR6 464 aaPredicted RBP20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 IL12RB2Q99665 862 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 SIRPGQ9P1W8 387 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 TXNDC16Q9P2K2 825 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 AAR2Q9Y312 384 aaKnown RBP20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 PLXNA3P51805 1871 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 ZCWPW2A0A1B0GU75 182 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 FAM92AA1XBS5 289 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 NT5C1B-RDH14C9J2C7 533 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 MATN3O15232 486 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 ITGA2BP08514 1039 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 FGFR3P22607 806 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 DNAJB2P25686 324 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 PBX3P40426 434 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 SLC20A2Q08357 652 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 OVGP1Q12889 678 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 CERCAMQ5T4B2 595 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 GRTP1Q5TC63 336 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 OTOP3Q7RTS5 596 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 LRRC49Q8IUZ0 686 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 TTC9BQ8N6N2 239 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 ERP27Q96DN0 273 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 DEFB118Q96PH6 123 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 KLC4Q9NSK0 619 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 GMIPQ9P107 970 aa20.78■□□□□ 0.92
CHRNA3-202ENST00000348639 VWA8A3KMH1 1905 aa20.77■□□□□ 0.92
CHRNA3-202ENST00000348639 WASH4PA8MWX3 477 aa20.77■□□□□ 0.92
CHRNA3-202ENST00000348639 CDH17Q12864 832 aa20.77■□□□□ 0.92
CHRNA3-202ENST00000348639 TCTN1Q2MV58 587 aa20.77■□□□□ 0.92
CHRNA3-202ENST00000348639 CYB5D1Q6P9G0 228 aa20.77■□□□□ 0.92
CHRNA3-202ENST00000348639 KYAT3Q6YP21 454 aaKnown RBP20.77■□□□□ 0.92
CHRNA3-202ENST00000348639 FAM43BQ6ZT52 329 aaPredicted RBP20.77■□□□□ 0.92
CHRNA3-202ENST00000348639 NLRP9Q7RTR0 991 aa20.77■□□□□ 0.92
CHRNA3-202ENST00000348639 C14orf80Q86SX3 495 aa20.77■□□□□ 0.92
CHRNA3-202ENST00000348639 USP33Q8TEY7 942 aa20.77■□□□□ 0.92
CHRNA3-202ENST00000348639 SCLYQ96I15 445 aa20.77■□□□□ 0.92
CHRNA3-202ENST00000348639 FCRL5Q96RD9 977 aa20.77■□□□□ 0.92
CHRNA3-202ENST00000348639 NDFIP2Q9NV92 336 aa20.77■□□□□ 0.92
CHRNA3-202ENST00000348639 UBP1Q9NZI7 540 aa20.77■□□□□ 0.92
CHRNA3-202ENST00000348639 IL1RAPL1Q9NZN1 696 aa20.77■□□□□ 0.92
CHRNA3-202ENST00000348639 FNIP2Q9P278 1114 aa20.77■□□□□ 0.92
CHRNA3-202ENST00000348639 MRPL42Q9Y6G3 142 aaKnown RBP20.77■□□□□ 0.92
CHRNA3-202ENST00000348639 TET1Q8NFU7 2136 aa20.77■□□□□ 0.92
CHRNA3-202ENST00000348639 TPP1O14773 563 aa20.77■□□□□ 0.91
CHRNA3-202ENST00000348639 BIRC5O15392 142 aa20.77■□□□□ 0.91
CHRNA3-202ENST00000348639 ATP9BO43861 1147 aa20.77■□□□□ 0.91
CHRNA3-202ENST00000348639 SOAT2O75908 522 aa20.77■□□□□ 0.91
CHRNA3-202ENST00000348639 ATN1P54259 1190 aaPredicted RBP20.77■□□□□ 0.91
CHRNA3-202ENST00000348639 PIK3R6Q5UE93 754 aa20.77■□□□□ 0.91
CHRNA3-202ENST00000348639 ATG16L1Q676U5 607 aa20.77■□□□□ 0.91
CHRNA3-202ENST00000348639 TIGD7Q6NT04 549 aaPredicted RBP20.77■□□□□ 0.91
CHRNA3-202ENST00000348639 RFWD2Q8NHY2 731 aa20.77■□□□□ 0.91
CHRNA3-202ENST00000348639 RAB3IL1Q8TBN0 382 aa20.77■□□□□ 0.91
CHRNA3-202ENST00000348639 APOL2Q9BQE5 337 aa20.77■□□□□ 0.91
CHRNA3-202ENST00000348639 MECRQ9BV79 373 aa20.77■□□□□ 0.91
CHRNA3-202ENST00000348639 MARCH5Q9NX47 278 aa20.77■□□□□ 0.91
CHRNA3-202ENST00000348639 SOX13Q9UN79 622 aa20.77■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms