RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 ETV4P43268 484 aa14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 SERPINB9P50453 376 aa14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 SMARCB1Q12824 385 aa14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 RASIP1Q5U651 963 aa14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 SLC39A5Q6ZMH5 540 aa14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 CDHR3Q6ZTQ4 885 aa14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 MARK2Q7KZI7 788 aaKnown RBP14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 TRPM8Q7Z2W7 1104 aa14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 MIB1Q86YT6 1006 aa14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 ZNF419Q96HQ0 510 aaPredicted RBP14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 SPATA17Q96L03 361 aa14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 SRPK1Q96SB4 655 aaKnown RBP14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 APOL2Q9BQE5 337 aa14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 VPS11Q9H270 941 aa14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 LRRC40Q9H9A6 602 aa14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 SLC17A6Q9P2U8 582 aa14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 ARL2BPQ9Y2Y0 163 aa14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 CDY1Q9Y6F8 540 aa14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 TANC1Q9C0D5 1861 aa14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 GREB1Q4ZG55 1949 aa14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 DHRS4L1P0CG22 281 aa14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 ALADP13716 330 aa14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 ALDH7A1P49419 539 aaKnown RBP14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 PSEN1P49768 467 aa14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 PRPSAP1Q14558 356 aa14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 PSMD5Q16401 504 aa14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 MS4A13Q5J8X5 152 aa14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 C10orf120Q5SQS8 335 aa14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 AFMIDQ63HM1 303 aa14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.42□□□□□ -0.18e-9■■■■■ 28.4
CDK5RAP1-202ENST00000346416 CCDC63Q8NA47 563 aa14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 FCRL3Q96P31 734 aaPredicted RBP14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 IQCGQ9H095 443 aaKnown RBP14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 IL1RAPL1Q9NZN1 696 aa14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 MARCH2Q9P0N8 246 aa14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 PRKAG3Q9UGI9 489 aa14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 STARD13Q9Y3M8 1113 aa14.42□□□□□ -0.1
CDK5RAP1-202ENST00000346416 MATN3O15232 486 aa14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 CACNG3O60359 315 aa14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 EDF1O60869 148 aaKnown RBP14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 TLE2Q04725 743 aa14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 SMAD1Q15797 465 aaKnown RBP14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 LACTB2Q53H82 288 aaPredicted RBP14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 SPANXN3Q5MJ09 141 aa14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 CERCAMQ5T4B2 595 aa14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 TMEM135Q86UB9 458 aa14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 ZNF683Q8IZ20 524 aa14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 FBXO22Q8NEZ5 403 aa14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 SPATA22Q8NHS9 363 aa14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 GIPC2Q8TF65 315 aa14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 IL12RB2Q99665 862 aa14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 SLC13A1Q9BZW2 595 aa14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 ALG13Q9NP73 1137 aaKnown RBP14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 OLA1Q9NTK5 396 aaKnown RBP14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 ABCF3Q9NUQ8 709 aa14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 PSAT1Q9Y617 370 aa14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 MICAL3Q7RTP6 2002 aa14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 NYNRINQ9P2P1 1898 aaKnown RBP14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 WASH4PA8MWX3 477 aa14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 ADAM12O43184 909 aa14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 PARNO95453 639 aaKnown RBP14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 ERVK-10P10266 1014 aa14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 CNTFP26441 200 aa14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 CCNFP41002 786 aa14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 PAPOLAP51003 745 aaKnown RBP14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 RPL10AP62906 217 aaKnown RBP14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 MGAT5Q09328 741 aa14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 TRIP4Q15650 581 aaPredicted RBP14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 TRIM60Q495X7 471 aa14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 NAPEPLDQ6IQ20 393 aa14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 PACS1Q6VY07 963 aa14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 C2orf15Q8WU43 125 aaKnown RBP14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 ZNF669Q96BR6 464 aaPredicted RBP14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 CERS2Q96G23 380 aa14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 BTN2A3PQ96KV6 586 aa14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 OXCT2Q9BYC2 517 aaPredicted RBP14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 PRDM5Q9NQX1 630 aaPredicted RBP14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 ZFATQ9P243 1243 aa14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 GGT7Q9UJ14 662 aa14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 MAGED2Q9UNF1 606 aaPredicted RBP14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 DOCK4Q8N1I0 1966 aa14.41□□□□□ -0.1
CDK5RAP1-202ENST00000346416 ATP9BO43861 1147 aa14.4□□□□□ -0.1
CDK5RAP1-202ENST00000346416 FSBPO95073 299 aa14.4□□□□□ -0.1
CDK5RAP1-202ENST00000346416 MT-CYBP00156 380 aaPredicted RBP14.4□□□□□ -0.1
CDK5RAP1-202ENST00000346416 HMBSP08397 361 aa14.4□□□□□ -0.1
CDK5RAP1-202ENST00000346416 TPH1P17752 444 aa14.4□□□□□ -0.1
CDK5RAP1-202ENST00000346416 RPL17P18621 184 aaKnown RBP14.4□□□□□ -0.1
CDK5RAP1-202ENST00000346416 ATF6P18850 670 aa14.4□□□□□ -0.1
CDK5RAP1-202ENST00000346416 NPY2RP49146 381 aa14.4□□□□□ -0.1
CDK5RAP1-202ENST00000346416 ACTN3Q08043 901 aaPredicted RBP14.4□□□□□ -0.1
CDK5RAP1-202ENST00000346416 SLC20A2Q08357 652 aa14.4□□□□□ -0.1
CDK5RAP1-202ENST00000346416 CDH17Q12864 832 aa14.4□□□□□ -0.1
CDK5RAP1-202ENST00000346416 NAB1Q13506 487 aa14.4□□□□□ -0.1
CDK5RAP1-202ENST00000346416 TIGD7Q6NT04 549 aaPredicted RBP14.4□□□□□ -0.1
CDK5RAP1-202ENST00000346416 TFAP2DQ7Z6R9 452 aa14.4□□□□□ -0.1
CDK5RAP1-202ENST00000346416 RASSF3Q86WH2 238 aa14.4□□□□□ -0.1
CDK5RAP1-202ENST00000346416 LRRC49Q8IUZ0 686 aa14.4□□□□□ -0.1
CDK5RAP1-202ENST00000346416 KLHDC8BQ8IXV7 354 aa14.4□□□□□ -0.1
CDK5RAP1-202ENST00000346416 MICALL1Q8N3F8 863 aa14.4□□□□□ -0.1
CDK5RAP1-202ENST00000346416 ATP6V0D2Q8N8Y2 350 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms