RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 COPG2Q9UBF2 871 aa15.78■□□□□ 0.12
UPF3B-202ENST00000345865 PTPRDP23468 1912 aa15.77■□□□□ 0.12
UPF3B-202ENST00000345865 NLRC5Q86WI3 1866 aa15.77■□□□□ 0.12
UPF3B-202ENST00000345865 ARHGAP42A6NI28 874 aa15.77■□□□□ 0.12
UPF3B-202ENST00000345865 PRR5-ARHGAP8B1AHC4 643 aa15.77■□□□□ 0.12
UPF3B-202ENST00000345865 B2RBV5 119 aa15.77■□□□□ 0.12
UPF3B-202ENST00000345865 GOLGA8TH3BQL2 631 aa15.77■□□□□ 0.12
UPF3B-202ENST00000345865 SRGAP2BP0DMP2 458 aa15.77■□□□□ 0.12
UPF3B-202ENST00000345865 MX2P20592 715 aa15.77■□□□□ 0.12
UPF3B-202ENST00000345865 ARHGAP8P85298 464 aa15.77■□□□□ 0.12
UPF3B-202ENST00000345865 DBN1Q16643 649 aa15.77■□□□□ 0.12
UPF3B-202ENST00000345865 RSPH3Q86UC2 560 aa15.77■□□□□ 0.12
UPF3B-202ENST00000345865 KIRREL3Q8IZU9 778 aa15.77■□□□□ 0.12
UPF3B-202ENST00000345865 RBM15BQ8NDT2 890 aaKnown RBP15.77■□□□□ 0.12
UPF3B-202ENST00000345865 SMC1BQ8NDV3 1235 aa15.77■□□□□ 0.12
UPF3B-202ENST00000345865 USP33Q8TEY7 942 aa15.77■□□□□ 0.12
UPF3B-202ENST00000345865 ATP2A3Q93084 1043 aa15.77■□□□□ 0.12
UPF3B-202ENST00000345865 PNPOQ9NVS9 261 aa15.77■□□□□ 0.12
UPF3B-202ENST00000345865 CCDC78A2IDD5 438 aa15.77■□□□□ 0.11
UPF3B-202ENST00000345865 MANSC4A6NHS7 340 aaPredicted RBP15.77■□□□□ 0.11
UPF3B-202ENST00000345865 IGLV3-25P01717 112 aa15.77■□□□□ 0.11
UPF3B-202ENST00000345865 ODC1P11926 461 aa15.77■□□□□ 0.11
UPF3B-202ENST00000345865 CYBAP13498 195 aa15.77■□□□□ 0.11
UPF3B-202ENST00000345865 PGGT1BP53609 377 aa15.77■□□□□ 0.11
UPF3B-202ENST00000345865 LIMK2P53671 638 aa15.77■□□□□ 0.11
UPF3B-202ENST00000345865 IRF9Q00978 393 aa15.77■□□□□ 0.11
UPF3B-202ENST00000345865 KDSRQ06136 332 aa15.77■□□□□ 0.11
UPF3B-202ENST00000345865 RCN2Q14257 317 aa15.77■□□□□ 0.11
UPF3B-202ENST00000345865 INSCQ1MX18 579 aa15.77■□□□□ 0.11
UPF3B-202ENST00000345865 DCLRE1AQ6PJP8 1040 aa15.77■□□□□ 0.11
UPF3B-202ENST00000345865 TRIB2Q92519 343 aa15.77■□□□□ 0.11
UPF3B-202ENST00000345865 RILPQ96NA2 401 aa15.77■□□□□ 0.11
UPF3B-202ENST00000345865 MCMBPQ9BTE3 642 aa15.77■□□□□ 0.11
UPF3B-202ENST00000345865 BRD8Q9H0E9 1235 aa15.77■□□□□ 0.11
UPF3B-202ENST00000345865 SIK2Q9H0K1 926 aa15.77■□□□□ 0.11
UPF3B-202ENST00000345865 TRHDEQ9UKU6 1024 aa15.77■□□□□ 0.11
UPF3B-202ENST00000345865 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.77■□□□□ 0.11
UPF3B-202ENST00000345865 GPR182O15218 404 aa15.76■□□□□ 0.11
UPF3B-202ENST00000345865 SERPINE1P05121 402 aa15.76■□□□□ 0.11
UPF3B-202ENST00000345865 SERPINA6P08185 405 aa15.76■□□□□ 0.11
UPF3B-202ENST00000345865 NMBRP28336 390 aa15.76■□□□□ 0.11
UPF3B-202ENST00000345865 THPOP40225 353 aa15.76■□□□□ 0.11
UPF3B-202ENST00000345865 TRIM32Q13049 653 aa15.76■□□□□ 0.11
UPF3B-202ENST00000345865 OR6Y1Q8NGX8 325 aa15.76■□□□□ 0.11
UPF3B-202ENST00000345865 SPATA22Q8NHS9 363 aa15.76■□□□□ 0.11
UPF3B-202ENST00000345865 SH3TC2Q8TF17 1288 aa15.76■□□□□ 0.11
UPF3B-202ENST00000345865 IRGQQ8WZA9 623 aa15.76■□□□□ 0.11
UPF3B-202ENST00000345865 MCUR1Q96AQ8 359 aa15.76■□□□□ 0.11
UPF3B-202ENST00000345865 OXCT2Q9BYC2 517 aaPredicted RBP15.76■□□□□ 0.11
UPF3B-202ENST00000345865 ARHGAP39Q9C0H5 1083 aa15.76■□□□□ 0.11
UPF3B-202ENST00000345865 YY1AP1Q9H869 796 aa15.76■□□□□ 0.11
UPF3B-202ENST00000345865 ZNF195O14628 629 aa15.76■□□□□ 0.11
UPF3B-202ENST00000345865 KPNA6O60684 536 aa15.76■□□□□ 0.11
UPF3B-202ENST00000345865 ZNF623O75123 536 aa15.76■□□□□ 0.11
UPF3B-202ENST00000345865 CYP11A1P05108 521 aa15.76■□□□□ 0.11
UPF3B-202ENST00000345865 SERPINB6P35237 376 aa15.76■□□□□ 0.11
UPF3B-202ENST00000345865 PTDSS1P48651 473 aaKnown RBP15.76■□□□□ 0.11
UPF3B-202ENST00000345865 CRHR2Q13324 411 aa15.76■□□□□ 0.11
UPF3B-202ENST00000345865 ITGA9Q13797 1035 aa15.76■□□□□ 0.11
UPF3B-202ENST00000345865 RWDD4Q6NW29 188 aaKnown RBP15.76■□□□□ 0.11
UPF3B-202ENST00000345865 ARHGAP12Q8IWW6 846 aa15.76■□□□□ 0.11
UPF3B-202ENST00000345865 RNF34Q969K3 372 aa15.76■□□□□ 0.11
UPF3B-202ENST00000345865 DMAP1Q9NPF5 467 aaPredicted RBP15.76■□□□□ 0.11
UPF3B-202ENST00000345865 NDFIP2Q9NV92 336 aa15.76■□□□□ 0.11
UPF3B-202ENST00000345865 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.76■□□□□ 0.11
UPF3B-202ENST00000345865 PLA2G4CQ9UP65 541 aa15.76■□□□□ 0.11
UPF3B-202ENST00000345865 INPP5FQ9Y2H2 1132 aa15.76■□□□□ 0.11
UPF3B-202ENST00000345865 ERI2A8K979 691 aaKnown RBP15.75■□□□□ 0.11
UPF3B-202ENST00000345865 M0QZQ0 153 aa15.75■□□□□ 0.11
UPF3B-202ENST00000345865 MTSS1O43312 755 aa15.75■□□□□ 0.11
UPF3B-202ENST00000345865 KRT36O76013 467 aa15.75■□□□□ 0.11
UPF3B-202ENST00000345865 YY1P25490 414 aa15.75■□□□□ 0.11
UPF3B-202ENST00000345865 SPRP35270 261 aaPredicted RBP15.75■□□□□ 0.11
UPF3B-202ENST00000345865 DSC3Q14574 896 aa15.75■□□□□ 0.11
UPF3B-202ENST00000345865 RABGAP1LQ5R372 815 aa15.75■□□□□ 0.11
UPF3B-202ENST00000345865 NAPRTQ6XQN6 538 aa15.75■□□□□ 0.11
UPF3B-202ENST00000345865 RPAINQ86UA6 219 aa15.75■□□□□ 0.11
UPF3B-202ENST00000345865 KCNMB4Q86W47 210 aa15.75■□□□□ 0.11
UPF3B-202ENST00000345865 GPATCH11Q8N954 259 aa15.75■□□□□ 0.11
UPF3B-202ENST00000345865 RSRC1Q96IZ7 334 aaKnown RBP15.75■□□□□ 0.11
UPF3B-202ENST00000345865 OSBPL2Q9H1P3 480 aa15.75■□□□□ 0.11
UPF3B-202ENST00000345865 DCLRE1BQ9H816 532 aa15.75■□□□□ 0.11
UPF3B-202ENST00000345865 C20orf96Q9NUD7 363 aaPredicted RBP15.75■□□□□ 0.11
UPF3B-202ENST00000345865 SFMBT1Q9UHJ3 866 aa15.75■□□□□ 0.11
UPF3B-202ENST00000345865 GABRQQ9UN88 632 aa15.75■□□□□ 0.11
UPF3B-202ENST00000345865 A0A0U1RQF3 1178 aa15.74■□□□□ 0.11
UPF3B-202ENST00000345865 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.74■□□□□ 0.11
UPF3B-202ENST00000345865 MSI1O43347 362 aaKnown RBP15.74■□□□□ 0.11
UPF3B-202ENST00000345865 MT-CYBP00156 380 aaPredicted RBP15.74■□□□□ 0.11
UPF3B-202ENST00000345865 RALBP11234 206 aa15.74■□□□□ 0.11
UPF3B-202ENST00000345865 CDC25CP30307 473 aa15.74■□□□□ 0.11
UPF3B-202ENST00000345865 PGM1P36871 562 aa15.74■□□□□ 0.11
UPF3B-202ENST00000345865 SERPINB8P50452 374 aa15.74■□□□□ 0.11
UPF3B-202ENST00000345865 FRG1Q14331 258 aaKnown RBP15.74■□□□□ 0.11
UPF3B-202ENST00000345865 VWA5B1Q5TIE3 1220 aa15.74■□□□□ 0.11
UPF3B-202ENST00000345865 ITPRIPL1Q6GPH6 555 aa15.74■□□□□ 0.11
UPF3B-202ENST00000345865 CLEC14AQ86T13 490 aa15.74■□□□□ 0.11
UPF3B-202ENST00000345865 TMPRSS6Q8IU80 811 aa15.74■□□□□ 0.11
UPF3B-202ENST00000345865 WDR75Q8IWA0 830 aaKnown RBP15.74■□□□□ 0.11
UPF3B-202ENST00000345865 RSPH1Q8WYR4 309 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms