RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 ZBTB49Q6ZSB9 765 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 SPATA20Q8TB22 786 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 SLCO2A1Q92959 643 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 PIGSQ96S52 555 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 NUP85Q9BW27 656 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 PSMC3IPQ9P2W1 217 aaPredicted RBP3.83□□□□□ -1.8
SYNE2-202ENST00000344113 SPO11Q9Y5K1 396 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 ZMYM6O95789 1325 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 CD3EAPO15446 510 aaKnown RBP3.83□□□□□ -1.8
SYNE2-202ENST00000344113 HMBSP08397 361 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 S100GP29377 79 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 MNDAP41218 407 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 NAPRTQ6XQN6 538 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 RFX8Q6ZV50 586 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 ZNF786Q8N393 782 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 TTLL6Q8N841 843 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 OR6Y1Q8NGX8 325 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 FOXP1Q9H334 677 aaPredicted RBP3.83□□□□□ -1.8
SYNE2-202ENST00000344113 C1orf115Q9H7X2 142 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 TMEM45AQ9NWC5 275 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 PCDHGA12O60330 932 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 RPP14O95059 124 aaKnown RBP3.83□□□□□ -1.8
SYNE2-202ENST00000344113 MYL12AP19105 171 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 RFC5P40937 340 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 DYRK1AQ13627 763 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 SLC4A11Q8NBS3 891 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 OR5F1O95221 314 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 GMPSP49915 693 aaPredicted RBP3.83□□□□□ -1.8
SYNE2-202ENST00000344113 TMEM62Q0P6H9 643 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 AADACL4Q5VUY2 407 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 MRRFQ96E11 262 aaKnown RBP3.83□□□□□ -1.8
SYNE2-202ENST00000344113 SLC29A1Q99808 456 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 KCNQ5Q9NR82 932 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 PANK4Q9NVE7 773 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 TPRP12270 2363 aaKnown RBP3.82□□□□□ -1.8
SYNE2-202ENST00000344113 hCG_1642624A0A1W2PR95 340 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 LPXNO60711 386 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 CCNKO75909 580 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 CD2P06729 351 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 RAD23AP54725 363 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 DCDC5Q6ZRR9 648 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 PPIL6Q8IXY8 311 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 OTUD7AQ8TE49 926 aaPredicted RBP3.82□□□□□ -1.8
SYNE2-202ENST00000344113 DNTTIP1Q9H147 329 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 STK32BQ9NY57 414 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 DDX56Q9NY93 547 aaKnown RBP3.82□□□□□ -1.8
SYNE2-202ENST00000344113 CDYLQ9Y232 598 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 TRPV2Q9Y5S1 764 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 PRKCBP05771 671 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 ERCC2P18074 760 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 GNA12Q03113 381 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 MSANTD1Q6ZTZ1 278 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 EID3Q8N140 333 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 REXO1Q8N1G1 1221 aaKnown RBP3.82□□□□□ -1.8
SYNE2-202ENST00000344113 MFSD2AQ8NA29 543 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 TESK2Q96S53 571 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 POLD4Q9HCU8 107 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 NECTIN3Q9NQS3 549 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 ARHGEF40Q8TER5 1519 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 CACNA1CQ13936 2221 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 PPM1DO15297 605 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 RHOBTB3O94955 611 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 SPARCP09486 303 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 HSD3B2P26439 372 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 PLTPP55058 493 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 HIF1AQ16665 826 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 SLC9C2Q5TAH2 1124 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 HMBOX1Q6NT76 420 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 MOB1BQ7L9L4 216 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 PEG10Q86TG7 708 aaKnown RBP3.82□□□□□ -1.8
SYNE2-202ENST00000344113 QRFPRQ96P65 431 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 SLC4A9Q96Q91 983 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 ZNF416Q9BWM5 594 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 ATP13A1Q9HD20 1204 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 ICKQ9UPZ9 632 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 GJA3Q9Y6H8 435 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 CROCCQ5TZA2 2017 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 A0A087WWV3 80 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 ADAM12O43184 909 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 OIP5O43482 229 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 SEC24AO95486 1093 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 RNF212Q495C1 297 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 CDH26Q8IXH8 852 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 TC2NQ8N9U0 490 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 OR8K5Q8NH50 307 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 FAM84AQ96KN4 292 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 ZNF560Q96MR9 790 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 REEP4Q9H6H4 257 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 EDARQ9UNE0 448 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 AGPSO00116 658 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 DYRK3O43781 588 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 ADCY9O60503 1353 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 SUPT7LO94864 414 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 RPS6KB1P23443 525 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 TPTEP56180 551 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 ARCQ7LC44 396 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 MAP4K1Q92918 833 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 ZDHHC5Q9C0B5 715 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 OPA3Q9H6K4 179 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 PCDHB16Q9NRJ7 776 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms